Literature DB >> 26027461

Heterotic Haplotype Capture: precision breeding for hybrid performance.

Rod J Snowdon1, Amine Abbadi2, Tobias Kox3, Thomas Schmutzer4, Gunhild Leckband5.   

Abstract

The need to improve hybrid performance, abiotic stress tolerance, and disease resistance without compromising seed quality makes the targeted capture of untapped diversity a major objective for crop breeders. Here we introduce the concept of Heterotic Haplotype Capture (HHC), in which genome sequence imputation is used to trace novel heterozygous chromosome blocks contributing to hybrid performance in large, structured populations of interrelated F1 hybrids containing interesting new diversity for breeding.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  genetic diversity; genome sequencing; genomic prediction; heterosis; plant breeding

Mesh:

Year:  2015        PMID: 26027461     DOI: 10.1016/j.tplants.2015.04.013

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  15 in total

1.  Genome-wide regression models considering general and specific combining ability predict hybrid performance in oilseed rape with similar accuracy regardless of trait architecture.

Authors:  Christian R Werner; Lunwen Qian; Kai P Voss-Fels; Amine Abbadi; Gunhild Leckband; Matthias Frisch; Rod J Snowdon
Journal:  Theor Appl Genet       Date:  2017-10-28       Impact factor: 5.699

2.  The iSelect 9 K SNP analysis revealed polyploidization induced revolutionary changes and intense human selection causing strong haplotype blocks in wheat.

Authors:  Chenyang Hao; Yuquan Wang; Shiaoman Chao; Tian Li; Hongxia Liu; Lanfen Wang; Xueyong Zhang
Journal:  Sci Rep       Date:  2017-01-30       Impact factor: 4.379

3.  High Density Linkage Map Construction and QTL Detection for Three Silique-Related Traits in Orychophragmus violaceus Derived Brassica napus Population.

Authors:  Yi Yang; Yusen Shen; Shunda Li; Xianhong Ge; Zaiyun Li
Journal:  Front Plant Sci       Date:  2017-09-06       Impact factor: 5.753

Review 4.  Exploring and Harnessing Haplotype Diversity to Improve Yield Stability in Crops.

Authors:  Lunwen Qian; Lee T Hickey; Andreas Stahl; Christian R Werner; Ben Hayes; Rod J Snowdon; Kai P Voss-Fels
Journal:  Front Plant Sci       Date:  2017-09-05       Impact factor: 5.753

5.  Hidden Effects of Seed Quality Breeding on Germination in Oilseed Rape (Brassica napus L.).

Authors:  Sarah Hatzig; Frank Breuer; Nathalie Nesi; Sylvie Ducournau; Marie-Helene Wagner; Gunhild Leckband; Amine Abbadi; Rod J Snowdon
Journal:  Front Plant Sci       Date:  2018-04-03       Impact factor: 5.753

6.  Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus.

Authors:  Bhavna Hurgobin; Agnieszka A Golicz; Philipp E Bayer; Chon-Kit Kenneth Chan; Soodeh Tirnaz; Aria Dolatabadian; Sarah V Schiessl; Birgit Samans; Juan D Montenegro; Isobel A P Parkin; J Chris Pires; Boulos Chalhoub; Graham J King; Rod Snowdon; Jacqueline Batley; David Edwards
Journal:  Plant Biotechnol J       Date:  2018-01-10       Impact factor: 9.803

7.  Association genetics of the parameters related to nitrogen use efficiency in Brassica juncea L.

Authors:  Neha Gupta; Mehak Gupta; Javed Akhatar; Anna Goyal; Rimaljeet Kaur; Sanjula Sharma; Prinka Goyal; Archana Mukta; Navneet Kaur; Meenakshi Mittal; Mohini Prabha Singh; Baudh Bharti; V K Sardana; Surinder S Banga
Journal:  Plant Mol Biol       Date:  2020-09-30       Impact factor: 4.076

8.  Species-wide genome sequence and nucleotide polymorphisms from the model allopolyploid plant Brassica napus.

Authors:  Thomas Schmutzer; Birgit Samans; Emmanuelle Dyrszka; Chris Ulpinnis; Stephan Weise; Doreen Stengel; Christian Colmsee; Denis Lespinasse; Zeljko Micic; Stefan Abel; Peter Duchscherer; Frank Breuer; Amine Abbadi; Gunhild Leckband; Rod Snowdon; Uwe Scholz
Journal:  Sci Data       Date:  2015-12-08       Impact factor: 6.444

9.  Genomic Prediction of Testcross Performance in Canola (Brassica napus).

Authors:  Habib U Jan; Amine Abbadi; Sophie Lücke; Richard A Nichols; Rod J Snowdon
Journal:  PLoS One       Date:  2016-01-29       Impact factor: 3.240

10.  Haplotype hitchhiking promotes trait coselection in Brassica napus.

Authors:  Lunwen Qian; Wei Qian; Rod J Snowdon
Journal:  Plant Biotechnol J       Date:  2016-01-23       Impact factor: 9.803

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