Literature DB >> 26020223

Solid-State Nuclear Magnetic Resonance on the Static and Dynamic Domains of Huntingtin Exon-1 Fibrils.

J Mario Isas1, Ralf Langen1, Ansgar B Siemer1.   

Abstract

Amyloid-like fibrils formed by huntingtin exon-1 (htt_ex1) are a hallmark of Huntington's disease (HD). The structure of these fibrils is unknown, and determining their structure is an important step toward understanding the misfolding processes that cause HD. In HD, a polyglutamine (polyQ) domain in htt_ex1 is expanded to a degree that it gains the ability to form aggregates comprising the core of the resulting fibrils. Despite the simplicity of this polyQ sequence, the structure of htt_ex1 fibrils has been difficult to determine. This study provides a detailed structural investigation of fibrils formed by htt_ex1 using solid-state nuclear magnetic resonance (NMR) spectroscopy. We show that the polyQ domain of htt_ex1 forms the static amyloid core similar to polyQ model peptides. The Gln residues of this domain exist in two distinct conformations that are found in separate domains or monomers but are relatively close in space. The rest of htt_ex1 is relatively dynamic on an NMR time scale, especially the proline-rich C-terminus, which we found to be in a polyproline II helical and random coil conformation. We observed a similar dynamic C-terminus in a soluble form of htt_ex1, indicating that the conformation of this part of htt_ex1 is not changed upon its aggregation into an amyloid fibril. From these data, we propose a bottlebrush model for the fibrils formed by htt_ex1. In this model, the polyQ domains form the center and the proline-rich domains the bristles of the bottlebrush.

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Year:  2015        PMID: 26020223      PMCID: PMC4770890          DOI: 10.1021/acs.biochem.5b00281

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  41 in total

1.  Modulation of polyglutamine conformations and dimer formation by the N-terminus of huntingtin.

Authors:  Tim E Williamson; Andreas Vitalis; Scott L Crick; Rohit V Pappu
Journal:  J Mol Biol       Date:  2009-12-21       Impact factor: 5.469

2.  Aggregation of huntingtin in neuronal intranuclear inclusions and dystrophic neurites in brain.

Authors:  M DiFiglia; E Sapp; K O Chase; S W Davies; G P Bates; J P Vonsattel; N Aronin
Journal:  Science       Date:  1997-09-26       Impact factor: 47.728

3.  Fibrillar α-synuclein and huntingtin exon 1 assemblies are toxic to the cells.

Authors:  Laura Pieri; Karine Madiona; Luc Bousset; Ronald Melki
Journal:  Biophys J       Date:  2012-06-19       Impact factor: 4.033

4.  The likelihood of being affected with Huntington disease by a particular age, for a specific CAG size.

Authors:  R R Brinkman; M M Mezei; J Theilmann; E Almqvist; M R Hayden
Journal:  Am J Hum Genet       Date:  1997-05       Impact factor: 11.025

5.  Structure and dynamics of a helical hairpin and loop region in annexin 12: a site-directed spin labeling study.

Authors:  J Mario Isas; Ralf Langen; Harry T Haigler; Wayne L Hubbell
Journal:  Biochemistry       Date:  2002-02-05       Impact factor: 3.162

6.  Slow amyloid nucleation via α-helix-rich oligomeric intermediates in short polyglutamine-containing huntingtin fragments.

Authors:  Murali Jayaraman; Ravindra Kodali; Bankanidhi Sahoo; Ashwani K Thakur; Anand Mayasundari; Rakesh Mishra; Cynthia B Peterson; Ronald Wetzel
Journal:  J Mol Biol       Date:  2011-12-09       Impact factor: 5.469

7.  Mechanism of cis-inhibition of polyQ fibrillation by polyP: PPII oligomers and the hydrophobic effect.

Authors:  Gregory D Darnell; JohnMark Derryberry; Josh W Kurutz; Stephen C Meredith
Journal:  Biophys J       Date:  2009-10-21       Impact factor: 4.033

8.  Molecular structure of β-amyloid fibrils in Alzheimer's disease brain tissue.

Authors:  Jun-Xia Lu; Wei Qiang; Wai-Ming Yau; Charles D Schwieters; Stephen C Meredith; Robert Tycko
Journal:  Cell       Date:  2013-09-12       Impact factor: 41.582

9.  Polyglutamine- and temperature-dependent conformational rigidity in mutant huntingtin revealed by immunoassays and circular dichroism spectroscopy.

Authors:  Valentina Fodale; Natalie C Kegulian; Margherita Verani; Cristina Cariulo; Lucia Azzollini; Lara Petricca; Manuel Daldin; Roberto Boggio; Alessandro Padova; Rainer Kuhn; Robert Pacifici; Douglas Macdonald; Ryan C Schoenfeld; Hyunsun Park; J Mario Isas; Ralf Langen; Andreas Weiss; Andrea Caricasole
Journal:  PLoS One       Date:  2014-12-02       Impact factor: 3.240

10.  Polyglutamine amyloid core boundaries and flanking domain dynamics in huntingtin fragment fibrils determined by solid-state nuclear magnetic resonance.

Authors:  Cody L Hoop; Hsiang-Kai Lin; Karunakar Kar; Zhipeng Hou; Michelle A Poirier; Ronald Wetzel; Patrick C A van der Wel
Journal:  Biochemistry       Date:  2014-10-16       Impact factor: 3.162

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  31 in total

1.  Protofilament Structure and Supramolecular Polymorphism of Aggregated Mutant Huntingtin Exon 1.

Authors:  Jennifer C Boatz; Talia Piretra; Alessia Lasorsa; Irina Matlahov; James F Conway; Patrick C A van der Wel
Journal:  J Mol Biol       Date:  2020-06-27       Impact factor: 5.469

2.  Probing initial transient oligomerization events facilitating Huntingtin fibril nucleation at atomic resolution by relaxation-based NMR.

Authors:  Samuel A Kotler; Vitali Tugarinov; Thomas Schmidt; Alberto Ceccon; David S Libich; Rodolfo Ghirlando; Charles D Schwieters; G Marius Clore
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-11       Impact factor: 11.205

3.  Formation and Structure of Wild Type Huntingtin Exon-1 Fibrils.

Authors:  J Mario Isas; Andreas Langen; Myles C Isas; Nitin K Pandey; Ansgar B Siemer
Journal:  Biochemistry       Date:  2017-07-07       Impact factor: 3.162

Review 4.  Insights into protein misfolding and aggregation enabled by solid-state NMR spectroscopy.

Authors:  Patrick C A van der Wel
Journal:  Solid State Nucl Magn Reson       Date:  2017-10-04       Impact factor: 2.293

5.  The folding equilibrium of huntingtin exon 1 monomer depends on its polyglutamine tract.

Authors:  Jose M Bravo-Arredondo; Natalie C Kegulian; Thomas Schmidt; Nitin K Pandey; Alan J Situ; Tobias S Ulmer; Ralf Langen
Journal:  J Biol Chem       Date:  2018-10-12       Impact factor: 5.157

6.  The 17-residue-long N terminus in huntingtin controls stepwise aggregation in solution and on membranes via different mechanisms.

Authors:  Nitin K Pandey; J Mario Isas; Anoop Rawat; Rachel V Lee; Jennifer Langen; Priyatama Pandey; Ralf Langen
Journal:  J Biol Chem       Date:  2017-12-27       Impact factor: 5.157

Review 7.  Hidden motions and motion-induced invisibility: Dynamics-based spectral editing in solid-state NMR.

Authors:  Irina Matlahov; Patrick C A van der Wel
Journal:  Methods       Date:  2018-04-24       Impact factor: 3.608

8.  Identification of distinct conformations associated with monomers and fibril assemblies of mutant huntingtin.

Authors:  Jan Ko; J Mario Isas; Adam Sabbaugh; Jung Hyun Yoo; Nitin K Pandey; Anjalika Chongtham; Mark Ladinsky; Wei-Li Wu; Heike Rohweder; Andreas Weiss; Douglas Macdonald; Ignacio Munoz-Sanjuan; Ralf Langen; Paul H Patterson; Ali Khoshnan
Journal:  Hum Mol Genet       Date:  2018-07-01       Impact factor: 6.150

9.  Dynamic domains of amyloid fibrils can be site-specifically assigned with proton detected 3D NMR spectroscopy.

Authors:  Alexander S Falk; Ansgar B Siemer
Journal:  J Biomol NMR       Date:  2016-10-20       Impact factor: 2.835

10.  Structural Model of the Proline-Rich Domain of Huntingtin Exon-1 Fibrils.

Authors:  Alexander S Falk; José M Bravo-Arredondo; Jobin Varkey; Sayuri Pacheco; Ralf Langen; Ansgar B Siemer
Journal:  Biophys J       Date:  2020-10-20       Impact factor: 4.033

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