Literature DB >> 26008623

Complete genome sequence of Spirosoma radiotolerans, a gamma-radiation-resistant bacterium isolated from rice field in South Korea.

Myung Kyum Kim1, Chang-Gi Back2, Hee-Young Jung3, Sathiyaraj Srinivasan4.   

Abstract

Spirosoma radiotolerans is a Gram-negative, short rod-shaped and gamma-radiation-resistant bacterium isolated from rice field in South Korea (GPS; 37°34'30″N, 127°00'30″E). The complete genome of S. radiotolerans consists of a chromosome (7,029,352bp). From the genome sequence database, we have identified the cluster of genes responsible for DNA recovery from ionizing radiation. The key enzymes for the nucleotide excision repair (NER) were investigated and were identified, suggesting that S. radiotolerans DG5A use (NER) pathways for efficient removal of pyrimidine dimers which are the most abundant type of UV-induced damage. Complete genome information enables further studies on the DNA repair mechanisms during the ionizing radiation.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Nucleotide excision repair; Radiation resistance; Spirosoma

Mesh:

Year:  2015        PMID: 26008623     DOI: 10.1016/j.jbiotec.2015.05.004

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  3 in total

1.  Deinococcus rubellus sp. nov., bacteria isolated from the muscle of antarctic fish.

Authors:  Seok-Gwan Choi; Seon Hwa Jeon; Jae-Bong Lee; Eun Sun Joo; Sangyong Lim; Hee-Young Jung; Myung Kyum Kim
Journal:  J Microbiol       Date:  2016-11-26       Impact factor: 3.422

2.  Larkinella humicola sp. nov., a gamma radiation-resistant bacterium isolated from soil.

Authors:  Yuna Park; Leonid N Ten; Young Koung Lee; Hee-Young Jung; Myung Kyum Kim
Journal:  Arch Microbiol       Date:  2022-02-18       Impact factor: 2.552

3.  Flavisolibacter swuensis sp. nov. isolated from soil.

Authors:  Eun Sun Joo; Seho Cha; Myung Kyum Kim; Weonhwa Jheong; Taegun Seo; Sathiyaraj Srinivasan
Journal:  J Microbiol       Date:  2015-06-27       Impact factor: 3.422

  3 in total

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