Literature DB >> 26004652

Multiplex polymerase chain reaction tests for detection of pathogens associated with gastroenteritis.

Hongwei Zhang1, Scott Morrison1, Yi-Wei Tang2.   

Abstract

A wide range of enteric pathogens can cause infectious gastroenteritis. Conventional diagnostic algorithms are time-consuming and often lack sensitivity and specificity. Advances in molecular technology have provided new clinical diagnostic tools. Multiplex polymerase chain reaction (PCR)-based testing has been used in gastroenterology diagnostics in recent years. This article presents a review of recent laboratory-developed multiplex PCR tests and current commercial multiplex gastrointestinal pathogen tests. It focuses on two commercial syndromic multiplex tests: Luminex xTAG Gastrointestinal Pathogen Panel and BioFire FilmArray gastrointestinal test. Multiplex PCR tests have shown superior sensitivity to conventional methods for detection of most pathogens.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Gastroenteritis; Laboratory-developed test; Multiplex PCR

Mesh:

Year:  2015        PMID: 26004652      PMCID: PMC5002946          DOI: 10.1016/j.cll.2015.02.006

Source DB:  PubMed          Journal:  Clin Lab Med        ISSN: 0272-2712            Impact factor:   1.935


  65 in total

1.  Detection of Campylobacter in stool and determination of significance by culture, enzyme immunoassay, and PCR in developing countries.

Authors:  James A Platts-Mills; Jie Liu; Jean Gratz; Esto Mduma; Caroline Amour; Ndealilia Swai; Mami Taniuchi; Sharmin Begum; Pablo Peñataro Yori; Drake H Tilley; Gwenyth Lee; Zeli Shen; Mark T Whary; James G Fox; Monica McGrath; Margaret Kosek; Rashidul Haque; Eric R Houpt
Journal:  J Clin Microbiol       Date:  2014-01-22       Impact factor: 5.948

2.  Comparison of the GenMark Diagnostics eSensor respiratory viral panel to real-time PCR for detection of respiratory viruses in children.

Authors:  Virginia M Pierce; Richard L Hodinka
Journal:  J Clin Microbiol       Date:  2012-08-08       Impact factor: 5.948

3.  Gastrointestinal pathogens detected by multiplex nucleic acid amplification testing in stools of pediatric patients and patients returning from the tropics.

Authors:  C Beckmann; U Heininger; H Marti; H H Hirsch
Journal:  Infection       Date:  2014-12       Impact factor: 3.553

4.  A parallel diagnostic accuracy study of three molecular panels for the detection of bacterial gastroenteritis.

Authors:  J S Biswas; A Al-Ali; P Rajput; D Smith; S D Goldenberg
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2014-06-17       Impact factor: 3.267

Review 5.  Nontyphoid salmonella infection: microbiology, clinical features, and antimicrobial therapy.

Authors:  Hung-Ming Chen; Yue Wang; Lin-Hui Su; Cheng-Hsun Chiu
Journal:  Pediatr Neonatol       Date:  2013-03-01       Impact factor: 2.083

6.  Cost analysis of multiplex PCR testing for diagnosing respiratory virus infections.

Authors:  James B Mahony; Gord Blackhouse; Jesse Babwah; Marek Smieja; Sonya Buracond; Sylvia Chong; William Ciccotelli; Tim O'Shea; Daifallah Alnakhli; May Griffiths-Turner; Ron Goeree
Journal:  J Clin Microbiol       Date:  2009-07-01       Impact factor: 5.948

7.  Aetiology of traveller's diarrhoea: evaluation of a multiplex PCR tool to detect different enteropathogens.

Authors:  Y Zboromyrska; J C Hurtado; P Salvador; M J Alvarez-Martínez; M E Valls; J Mas; M A Marcos; J Gascón; J Vila
Journal:  Clin Microbiol Infect       Date:  2014-04-10       Impact factor: 8.067

8.  Enhanced enteric virus detection in sporadic gastroenteritis using a multi-target real-time PCR panel: a one-year study.

Authors:  Xiaoli L Pang; Jutta K Preiksaitis; Bonita E Lee
Journal:  J Med Virol       Date:  2013-11-14       Impact factor: 2.327

Review 9.  The increasing application of multiplex nucleic acid detection tests to the diagnosis of syndromic infections.

Authors:  J Gray; L J Coupland
Journal:  Epidemiol Infect       Date:  2013-10-07       Impact factor: 4.434

10.  Nanolitre real-time PCR detection of bacterial, parasitic, and viral agents from patients with diarrhoea in Nunavut, Canada.

Authors:  David M Goldfarb; Brent Dixon; Ioana Moldovan; Nicholas Barrowman; Kirsten Mattison; Chad Zentner; Maureen Baikie; Sabah Bidawid; Francis Chan; Robert Slinger
Journal:  Int J Circumpolar Health       Date:  2013-04-08       Impact factor: 1.228

View more
  31 in total

1.  Molecular detection of common intestinal parasites: a performance evaluation of the BD Max™ Enteric Parasite Panel.

Authors:  R Batra; E Judd; J Eling; W Newsholme; S D Goldenberg
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2016-07-09       Impact factor: 3.267

Review 2.  Multiplex Molecular Panels for Diagnosis of Gastrointestinal Infection: Performance, Result Interpretation, and Cost-Effectiveness.

Authors:  Matthew J Binnicker
Journal:  J Clin Microbiol       Date:  2015-12       Impact factor: 5.948

Review 3.  A Decade of Development of Chromogenic Culture Media for Clinical Microbiology in an Era of Molecular Diagnostics.

Authors:  John D Perry
Journal:  Clin Microbiol Rev       Date:  2017-04       Impact factor: 26.132

4.  Clinical Practice Guidelines for Clostridium difficile Infection in Adults and Children: 2017 Update by the Infectious Diseases Society of America (IDSA) and Society for Healthcare Epidemiology of America (SHEA).

Authors:  L Clifford McDonald; Dale N Gerding; Stuart Johnson; Johan S Bakken; Karen C Carroll; Susan E Coffin; Erik R Dubberke; Kevin W Garey; Carolyn V Gould; Ciaran Kelly; Vivian Loo; Julia Shaklee Sammons; Thomas J Sandora; Mark H Wilcox
Journal:  Clin Infect Dis       Date:  2018-03-19       Impact factor: 9.079

5.  Depletion of Human DNA in Spiked Clinical Specimens for Improvement of Sensitivity of Pathogen Detection by Next-Generation Sequencing.

Authors:  Mohammad R Hasan; Arun Rawat; Patrick Tang; Puthen V Jithesh; Eva Thomas; Rusung Tan; Peter Tilley
Journal:  J Clin Microbiol       Date:  2016-01-13       Impact factor: 5.948

6.  Evaluation of a New Device for Simplifying and Standardizing Stool Sample Preparation for Viral Molecular Testing with Limited Hands-On Time.

Authors:  Linda Feghoul; Maud Salmona; Janine Cherot; Mony Fahd; Jean-Hugues Dalle; Carole Vachon; Aurélie Perrod; Philippe Bourgeois; Catherine Scieux; André Baruchel; François Simon; Jérôme LeGoff
Journal:  J Clin Microbiol       Date:  2016-01-13       Impact factor: 5.948

7.  Multiplex Molecular Stool Testing Rarely Impacts Antimicrobial Treatment Decisions More Than Three Days After Admission.

Authors:  Abdul Aleem; Gabriela Firak; Amy K Slenker
Journal:  Cureus       Date:  2021-04-30

8.  The Changing Landscape of Pediatric Viral Enteropathogens in the Post-Rotavirus Vaccine Era.

Authors:  Natasha Halasa; Bhinnata Piya; Laura S Stewart; Herdi Rahman; Daniel C Payne; Amy Woron; Linda Thomas; Lisha Constantine-Renna; Katie Garman; Rendie McHenry; James Chappell; Andrew J Spieker; Christopher Fonnesbeck; Einas Batarseh; Lubna Hamdan; Mary E Wikswo; Umesh Parashar; Michael D Bowen; Jan Vinjé; Aron J Hall; John R Dunn
Journal:  Clin Infect Dis       Date:  2021-02-16       Impact factor: 9.079

9.  Comparison of three multiplex gastrointestinal platforms for the detection of gastroenteritis viruses.

Authors:  Preeti Chhabra; Nicole Gregoricus; Geoffrey A Weinberg; Natasha Halasa; James Chappell; Ferdaus Hassan; Rangaraj Selvarangan; Slavica Mijatovic-Rustempasic; M Leanne Ward; Michael Bowen; Daniel C Payne; Jan Vinjé
Journal:  J Clin Virol       Date:  2017-09-01       Impact factor: 3.168

Review 10.  Norovirus in Cancer Patients: A Review.

Authors:  Divya Samantha Kondapi; Sasirekha Ramani; Mary K Estes; Robert L Atmar; Pablo C Okhuysen
Journal:  Open Forum Infect Dis       Date:  2021-03-14       Impact factor: 3.835

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.