Literature DB >> 25995900

Crystal structure of 2-(1-methyl-eth-yl)-1,3-thia-zolo[4,5-b]pyridine.

Gamal A El-Hiti1, Keith Smith2, Amany S Hegazy2, Saud A Alanazi1, Benson M Kariuki2.   

Abstract

In the title mol-ecule, C9H10N2S, one of the methyl groups is almost co-planar with the thia-zolo-pyridine rings with a deviation of 0.311 (3) Å from the least-squares plane of the thia-zolo-pyridine group. In the crystal, weak C-H⋯N hydrogen-bonding inter-actions lead to the formation of chains along [011].

Entities:  

Keywords:  crystal structure; hydrogen bonding; thia­zolo­pyridine

Year:  2015        PMID: 25995900      PMCID: PMC4420086          DOI: 10.1107/S2056989015006039

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For related compounds, see: Smith et al. (1994 ▸, 1995 ▸); El-Hiti (2003 ▸); Johnson et al. (2006 ▸); Thomae et al. (2008 ▸); Rao et al. (2009 ▸); Lee et al. (2010 ▸); Luo et al. (2015 ▸). For the X-ray crystal structures of related compounds, see: Yu et al. (2007 ▸); El-Hiti et al. (2014 ▸).

Experimental

Crystal data

C9H10N2S M = 178.25 Orthorhombic, a = 9.6376 (2) Å b = 10.1602 (2) Å c = 8.9254 (2) Å V = 873.98 (3) Å3 Z = 4 Cu Kα radiation μ = 2.81 mm−1 T = 150 K 0.23 × 0.20 × 0.14 mm

Data collection

Agilent SuperNova, Dual, Cu at zero, Atlas diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014 ▸) T min = 0.897, T max = 0.940 2848 measured reflections 1366 independent reflections 1351 reflections with I > 2σ(I) R int = 0.012

Refinement

R[F 2 > 2σ(F 2)] = 0.021 wR(F 2) = 0.057 S = 1.08 1366 reflections 111 parameters 1 restraint H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.20 e Å−3

Data collection: CrysAlis PRO (Agilent, 2014 ▸); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS2013 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸); software used to prepare material for publication: WinGX (Farrugia, 2012 ▸) and CHEMDRAW Ultra (Cambridge Soft, 2001 ▸). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989015006039/zs2329sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015006039/zs2329Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015006039/zs2329Isup3.cml Click here for additional data file. 9 10 2 . DOI: 10.1107/S2056989015006039/zs2329fig1.tif A mol­ecule of C9H10N2S with atom labels and 50% probability displacement ellipsoids for non-hydrogen atoms. Click here for additional data file. c . DOI: 10.1107/S2056989015006039/zs2329fig2.tif Crystal structure packing viewed down the c axis with C—H⋯N inter­actions shown as dotted lines. CCDC reference: 1056012 Additional supporting information: crystallographic information; 3D view; checkCIF report
C9H10N2SDx = 1.355 Mg m3
Mr = 178.25Cu Kα radiation, λ = 1.54184 Å
Orthorhombic, Pna21Cell parameters from 2276 reflections
a = 9.6376 (2) Åθ = 6.3–73.8°
b = 10.1602 (2) ŵ = 2.81 mm1
c = 8.9254 (2) ÅT = 150 K
V = 873.98 (3) Å3Block, colourless
Z = 40.23 × 0.20 × 0.14 mm
F(000) = 376
Agilent SuperNova, Dual, Cu at zero, Atlas diffractometer1366 independent reflections
Radiation source: sealed X-ray tube, SuperNova (Cu) X-ray Source1351 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.012
Detector resolution: 10.5082 pixels mm-1θmax = 74.0°, θmin = 6.3°
ω scansh = −11→10
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014)k = −12→8
Tmin = 0.897, Tmax = 0.940l = −10→10
2848 measured reflections
Refinement on F21 restraint
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.021H-atom parameters constrained
wR(F2) = 0.057w = 1/[σ2(Fo2) + (0.0375P)2 + 0.1081P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
1366 reflectionsΔρmax = 0.19 e Å3
111 parametersΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
C10.13501 (18)0.59856 (18)0.8660 (2)0.0227 (4)
C20.23657 (17)0.67547 (17)1.1015 (2)0.0208 (3)
C30.29550 (18)0.56187 (17)1.0365 (2)0.0203 (3)
C40.2865 (2)0.72261 (17)1.2365 (3)0.0257 (4)
H40.24830.79851.28290.031*
C50.39534 (19)0.6532 (2)1.3007 (3)0.0279 (4)
H50.43420.68131.39310.034*
C60.44760 (19)0.54145 (19)1.2283 (3)0.0273 (4)
H60.52200.49591.27520.033*
C70.05003 (18)0.57871 (19)0.7259 (3)0.0271 (4)
H70.01770.48520.72510.033*
C8−0.0783 (2)0.6663 (2)0.7204 (3)0.0365 (5)
H8A−0.13750.64750.80700.055*
H8B−0.12990.64880.62790.055*
H8C−0.04990.75890.72270.055*
C90.1411 (2)0.5992 (3)0.5875 (3)0.0421 (6)
H9A0.16660.69230.57960.063*
H9B0.08970.57270.49770.063*
H9C0.22530.54570.59660.063*
N10.23563 (16)0.52156 (16)0.9037 (2)0.0241 (3)
N20.40055 (14)0.49434 (16)1.0985 (2)0.0254 (4)
S10.10273 (4)0.73079 (4)0.98822 (7)0.02515 (14)
U11U22U33U12U13U23
C10.0205 (8)0.0253 (8)0.0224 (10)−0.0013 (7)0.0032 (7)−0.0026 (8)
C20.0212 (8)0.0210 (7)0.0203 (9)−0.0011 (6)0.0033 (6)−0.0004 (7)
C30.0199 (7)0.0206 (7)0.0204 (9)−0.0026 (6)0.0032 (6)−0.0024 (7)
C40.0292 (9)0.0258 (9)0.0221 (9)−0.0028 (7)0.0018 (8)−0.0061 (8)
C50.0302 (9)0.0353 (11)0.0184 (9)−0.0058 (7)−0.0024 (7)0.0002 (9)
C60.0258 (8)0.0303 (9)0.0259 (9)0.0005 (7)−0.0035 (8)0.0042 (8)
C70.0266 (8)0.0293 (9)0.0254 (9)−0.0036 (7)−0.0032 (8)−0.0030 (8)
C80.0293 (9)0.0428 (12)0.0374 (13)0.0037 (9)−0.0127 (9)−0.0071 (11)
C90.0351 (11)0.0705 (16)0.0207 (11)−0.0072 (11)−0.0024 (8)−0.0025 (11)
N10.0231 (7)0.0264 (8)0.0229 (8)0.0012 (6)0.0001 (6)−0.0067 (7)
N20.0238 (8)0.0239 (7)0.0284 (9)0.0024 (6)−0.0016 (6)−0.0002 (7)
S10.0242 (2)0.0266 (2)0.0246 (2)0.00703 (13)−0.0007 (2)−0.0048 (2)
C1—N11.291 (2)C6—N21.334 (3)
C1—C71.508 (3)C6—H60.9500
C1—S11.7585 (19)C7—C81.524 (3)
C2—C41.383 (3)C7—C91.530 (3)
C2—C31.411 (2)C7—H71.0000
C2—S11.7325 (19)C8—H8A0.9800
C3—N21.342 (2)C8—H8B0.9800
C3—N11.380 (2)C8—H8C0.9800
C4—C51.388 (3)C9—H9A0.9800
C4—H40.9500C9—H9B0.9800
C5—C61.400 (3)C9—H9C0.9800
C5—H50.9500
N1—C1—C7122.91 (17)C8—C7—C9111.1 (2)
N1—C1—S1115.73 (15)C1—C7—H7107.6
C7—C1—S1121.36 (14)C8—C7—H7107.6
C4—C2—C3120.08 (17)C9—C7—H7107.6
C4—C2—S1130.92 (14)C7—C8—H8A109.5
C3—C2—S1108.98 (14)C7—C8—H8B109.5
N2—C3—N1121.16 (16)H8A—C8—H8B109.5
N2—C3—C2123.53 (18)C7—C8—H8C109.5
N1—C3—C2115.30 (16)H8A—C8—H8C109.5
C2—C4—C5116.51 (17)H8B—C8—H8C109.5
C2—C4—H4121.7C7—C9—H9A109.5
C5—C4—H4121.7C7—C9—H9B109.5
C4—C5—C6119.6 (2)H9A—C9—H9B109.5
C4—C5—H5120.2C7—C9—H9C109.5
C6—C5—H5120.2H9A—C9—H9C109.5
N2—C6—C5124.73 (18)H9B—C9—H9C109.5
N2—C6—H6117.6C1—N1—C3110.99 (16)
C5—C6—H6117.6C6—N2—C3115.54 (16)
C1—C7—C8112.90 (18)C2—S1—C189.00 (9)
C1—C7—C9109.85 (15)
C4—C2—C3—N2−0.3 (3)C7—C1—N1—C3−179.88 (16)
S1—C2—C3—N2−179.06 (14)S1—C1—N1—C30.6 (2)
C4—C2—C3—N1178.46 (16)N2—C3—N1—C1178.62 (17)
S1—C2—C3—N1−0.3 (2)C2—C3—N1—C1−0.1 (2)
C3—C2—C4—C50.4 (3)C5—C6—N2—C30.0 (3)
S1—C2—C4—C5178.89 (15)N1—C3—N2—C6−178.61 (17)
C2—C4—C5—C6−0.4 (3)C2—C3—N2—C60.1 (3)
C4—C5—C6—N20.2 (3)C4—C2—S1—C1−178.11 (19)
N1—C1—C7—C8169.47 (19)C3—C2—S1—C10.50 (14)
S1—C1—C7—C8−11.0 (2)N1—C1—S1—C2−0.64 (15)
N1—C1—C7—C9−65.9 (3)C7—C1—S1—C2179.79 (16)
S1—C1—C7—C9113.64 (19)
D—H···AD—HH···AD···AD—H···A
C4—H4···N1i0.952.513.391 (2)153
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C4H4N1i 0.952.513.391(2)153

Symmetry code: (i) .

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