| Literature DB >> 25995895 |
Takeshi Kawasaki1, Takafumi Kitazawa2.
Abstract
In the title dimeric complex, [{UO2(NO3)(C15H11N3)}2O2], a peroxide ion bridges the two uran-yl(VI) [O=U=O](2+) ions. The O-O bond length of the peroxide is 1.485 (6) Å and the mid-point of this bond is located at the inversion centre of the dimer. The U atom exhibits a distorted hexa-gonal-bipyramidal coordination geometry with two uran-yl(VI) O atoms occupying the axial positions and one O atom of the monodentate nitrate ion, both O atoms of the peroxide ion and the three N atoms of the chelating tridentate 2,2':6',2''-terpyridine (terpy) ligand in the equatorial positions. Two of the N atoms of the terpy ligand lie above and below the mean plane containing the equatorial ligand atoms and the U atom [deviations from the mean plane: maximum 0.500 (2), minimum -0.472 (2) and r.m.s. = 0.2910 Å]. The dihedral angle between the terpy ligand and the mean plane is 35.61 (7)°. The bond lengths around the U atom decrease in the order U-N > U-Onitrate > U-Operoxo > U=O. The dimeric complexes pack in a three-dimensional network held together by weak π-π inter-actions [centroid-centroid distance = 3.659 (3) Å] between pyridyl rings of the terpy ligands in neighbouring dimers, together with inter-molecular C-H⋯O and C-H⋯π inter-actions. Weak intra-molecular C-H⋯O inter-actions are also observed.Entities:
Keywords: 2,2′:6′,2′′-terpyridine; crystal structure; dimer; peroxide; uranium(VI) complex; uranyl(VI) ion
Year: 2015 PMID: 25995895 PMCID: PMC4420076 DOI: 10.1107/S2056989015007987
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| [U2(NO3)2(O2)O4(C15H11N3)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4370 reflections |
| θ = 2.6–30.1° | |
| µ = 10.19 mm−1 | |
| β = 114.691 (1)° | Plate, orange |
| 0.28 × 0.14 × 0.06 mm | |
| Bruker APEXII CCD area-detector diffractometer | 4695 independent reflections |
| Radiation source: fine-focus sealed tube | 3636 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.333 pixels mm-1 | θmax = 31.0°, θmin = 2.6° |
| phi and ω scans | |
| Absorption correction: analytical ( | |
| 11692 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4695 reflections | (Δ/σ)max = 0.001 |
| 235 parameters | Δρmax = 2.24 e Å−3 |
| 0 restraints | Δρmin = −1.57 e Å−3 |
| Experimental. face-indexed absorption correction carried out with |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| U1 | 0.387048 (13) | 0.333645 (14) | 0.466857 (14) | 0.00993 (5) | |
| O1 | 0.3311 (3) | 0.3633 (3) | 0.3151 (3) | 0.0176 (7) | |
| O2 | 0.4441 (3) | 0.2963 (3) | 0.6171 (3) | 0.0168 (7) | |
| O3 | 0.4596 (3) | 0.5439 (3) | 0.5073 (4) | 0.0306 (10) | |
| O4 | 0.2546 (2) | 0.4979 (3) | 0.4721 (3) | 0.0152 (6) | |
| O5 | 0.1152 (3) | 0.4243 (3) | 0.3199 (3) | 0.0242 (8) | |
| O6 | 0.1038 (3) | 0.6064 (3) | 0.4006 (3) | 0.0283 (9) | |
| N1 | 0.5298 (3) | 0.1823 (3) | 0.4461 (3) | 0.0126 (7) | |
| N2 | 0.3249 (3) | 0.1020 (3) | 0.3740 (3) | 0.0097 (7) | |
| N3 | 0.2240 (3) | 0.2190 (3) | 0.4857 (3) | 0.0129 (7) | |
| N4 | 0.1554 (3) | 0.5090 (4) | 0.3945 (3) | 0.0165 (8) | |
| C1 | 0.6361 (4) | 0.2172 (4) | 0.4933 (4) | 0.0142 (9) | |
| H1 | 0.6585 | 0.2851 | 0.5491 | 0.017* | |
| C2 | 0.7141 (4) | 0.1591 (4) | 0.4644 (4) | 0.0147 (9) | |
| H2 | 0.7882 | 0.1858 | 0.5006 | 0.018* | |
| C3 | 0.6820 (4) | 0.0616 (4) | 0.3821 (4) | 0.0157 (9) | |
| H3 | 0.7329 | 0.0226 | 0.3580 | 0.019* | |
| C4 | 0.5733 (3) | 0.0215 (4) | 0.3351 (4) | 0.0146 (9) | |
| H4 | 0.5494 | −0.0468 | 0.2797 | 0.018* | |
| C5 | 0.5008 (3) | 0.0823 (4) | 0.3700 (4) | 0.0109 (8) | |
| C6 | 0.3841 (3) | 0.0422 (4) | 0.3258 (4) | 0.0116 (8) | |
| C7 | 0.3392 (4) | −0.0538 (4) | 0.2412 (4) | 0.0149 (9) | |
| H7 | 0.3831 | −0.0977 | 0.2103 | 0.018* | |
| C8 | 0.2299 (4) | −0.0839 (4) | 0.2032 (4) | 0.0163 (9) | |
| H8 | 0.1971 | −0.1464 | 0.1436 | 0.020* | |
| C9 | 0.1686 (4) | −0.0219 (4) | 0.2529 (4) | 0.0164 (9) | |
| H9 | 0.0934 | −0.0415 | 0.2281 | 0.020* | |
| C10 | 0.2192 (3) | 0.0695 (4) | 0.3396 (4) | 0.0108 (8) | |
| C11 | 0.1638 (4) | 0.1318 (4) | 0.4050 (4) | 0.0118 (8) | |
| C12 | 0.0579 (4) | 0.0988 (4) | 0.3906 (4) | 0.0173 (10) | |
| H12 | 0.0148 | 0.0396 | 0.3318 | 0.021* | |
| C13 | 0.0181 (4) | 0.1539 (5) | 0.4633 (5) | 0.0229 (11) | |
| H13 | −0.0543 | 0.1352 | 0.4530 | 0.027* | |
| C14 | 0.0819 (4) | 0.2362 (4) | 0.5515 (4) | 0.0193 (10) | |
| H14 | 0.0564 | 0.2702 | 0.6052 | 0.023* | |
| C15 | 0.1850 (4) | 0.2679 (4) | 0.5589 (4) | 0.0156 (9) | |
| H15 | 0.2293 | 0.3261 | 0.6179 | 0.019* |
| U1 | 0.01075 (8) | 0.00727 (7) | 0.01268 (8) | −0.00116 (7) | 0.00578 (6) | −0.00132 (7) |
| O1 | 0.0249 (18) | 0.0142 (15) | 0.0175 (17) | 0.0044 (14) | 0.0126 (15) | 0.0039 (13) |
| O2 | 0.0163 (16) | 0.0199 (15) | 0.0080 (16) | 0.0007 (14) | −0.0011 (13) | −0.0061 (13) |
| O3 | 0.0182 (18) | 0.0076 (14) | 0.075 (3) | 0.0007 (14) | 0.028 (2) | −0.0085 (17) |
| O4 | 0.0111 (14) | 0.0162 (14) | 0.0164 (16) | 0.0003 (14) | 0.0038 (13) | 0.0012 (14) |
| O5 | 0.0236 (18) | 0.0189 (16) | 0.023 (2) | 0.0019 (15) | 0.0024 (16) | −0.0031 (15) |
| O6 | 0.0224 (19) | 0.0228 (17) | 0.034 (2) | 0.0124 (16) | 0.0064 (17) | −0.0034 (17) |
| N1 | 0.0164 (18) | 0.0082 (16) | 0.0143 (19) | −0.0006 (15) | 0.0076 (16) | −0.0001 (14) |
| N2 | 0.0126 (17) | 0.0074 (15) | 0.0074 (17) | −0.0017 (14) | 0.0025 (15) | 0.0016 (13) |
| N3 | 0.0180 (19) | 0.0115 (16) | 0.0102 (19) | 0.0002 (16) | 0.0069 (16) | 0.0012 (14) |
| N4 | 0.0161 (18) | 0.0158 (17) | 0.017 (2) | 0.0033 (18) | 0.0066 (16) | 0.0043 (17) |
| C1 | 0.018 (2) | 0.0094 (18) | 0.016 (2) | −0.0009 (18) | 0.007 (2) | 0.0004 (17) |
| C2 | 0.016 (2) | 0.0102 (18) | 0.019 (2) | 0.0000 (19) | 0.0094 (19) | 0.0028 (18) |
| C3 | 0.022 (2) | 0.016 (2) | 0.014 (2) | 0.0001 (19) | 0.012 (2) | 0.0025 (18) |
| C4 | 0.018 (2) | 0.015 (2) | 0.010 (2) | 0.0022 (18) | 0.0046 (18) | 0.0002 (17) |
| C5 | 0.013 (2) | 0.0101 (18) | 0.008 (2) | 0.0009 (17) | 0.0025 (17) | 0.0038 (16) |
| C6 | 0.014 (2) | 0.0117 (19) | 0.009 (2) | 0.0030 (17) | 0.0043 (18) | 0.0006 (16) |
| C7 | 0.018 (2) | 0.015 (2) | 0.013 (2) | −0.0036 (19) | 0.0064 (19) | −0.0046 (17) |
| C8 | 0.022 (2) | 0.014 (2) | 0.009 (2) | −0.0040 (19) | 0.0031 (19) | −0.0054 (17) |
| C9 | 0.016 (2) | 0.018 (2) | 0.013 (2) | −0.0082 (19) | 0.0035 (18) | −0.0031 (18) |
| C10 | 0.013 (2) | 0.0084 (18) | 0.009 (2) | −0.0002 (17) | 0.0033 (17) | −0.0006 (16) |
| C11 | 0.014 (2) | 0.0091 (18) | 0.010 (2) | 0.0002 (17) | 0.0036 (17) | 0.0012 (16) |
| C12 | 0.017 (2) | 0.016 (2) | 0.019 (3) | −0.0022 (19) | 0.007 (2) | 0.0003 (19) |
| C13 | 0.014 (2) | 0.026 (2) | 0.032 (3) | −0.004 (2) | 0.013 (2) | −0.002 (2) |
| C14 | 0.024 (3) | 0.017 (2) | 0.023 (3) | −0.001 (2) | 0.016 (2) | −0.0033 (19) |
| C15 | 0.021 (2) | 0.013 (2) | 0.013 (2) | −0.0002 (19) | 0.0074 (19) | −0.0010 (17) |
| U1—O1 | 1.777 (3) | C2—H2 | 0.9500 |
| U1—O2 | 1.775 (3) | C3—C4 | 1.395 (6) |
| U1—O3 | 2.340 (3) | C3—H3 | 0.9500 |
| U1—O3i | 2.325 (3) | C4—C5 | 1.380 (6) |
| U1—O4 | 2.479 (3) | C4—H4 | 0.9500 |
| U1—N1 | 2.574 (3) | C5—C6 | 1.492 (6) |
| U1—N2 | 2.634 (3) | C6—C7 | 1.397 (6) |
| U1—N3 | 2.593 (3) | C7—C8 | 1.381 (6) |
| O3—O3i | 1.485 (6) | C7—H7 | 0.9500 |
| O3—U1i | 2.325 (3) | C8—C9 | 1.388 (6) |
| O4—N4 | 1.295 (5) | C8—H8 | 0.9500 |
| O5—N4 | 1.232 (5) | C9—C10 | 1.391 (6) |
| O6—N4 | 1.240 (4) | C9—H9 | 0.9500 |
| N1—C1 | 1.351 (6) | C10—C11 | 1.476 (6) |
| N1—C5 | 1.351 (5) | C11—C12 | 1.404 (6) |
| N2—C6 | 1.342 (5) | C12—C13 | 1.369 (6) |
| N2—C10 | 1.347 (5) | C12—H12 | 0.9500 |
| N3—C15 | 1.343 (5) | C13—C14 | 1.380 (7) |
| N3—C11 | 1.348 (5) | C13—H13 | 0.9500 |
| C1—C2 | 1.386 (6) | C14—C15 | 1.393 (6) |
| C1—H1 | 0.9500 | C14—H14 | 0.9500 |
| C2—C3 | 1.380 (6) | C15—H15 | 0.9500 |
| Cg(C1–C5/N1)···Cg(C6–C10/N2)ii | 3.659 (3) | ||
| O1—U1—O2 | 177.31 (13) | N1—C1—H1 | 118.3 |
| O1—U1—O3 | 91.64 (14) | C2—C1—H1 | 118.3 |
| O1—U1—O3i | 90.58 (14) | C3—C2—C1 | 118.7 (4) |
| O1—U1—O4 | 85.85 (12) | C3—C2—H2 | 120.7 |
| O2—U1—O3 | 90.58 (14) | C1—C2—H2 | 120.7 |
| O2—U1—O3i | 90.28 (15) | C2—C3—C4 | 118.7 (4) |
| O2—U1—O4 | 96.43 (12) | C2—C3—H3 | 120.7 |
| O3i—U1—O3 | 37.12 (13) | C4—C3—H3 | 120.7 |
| O3—U1—O4 | 66.75 (10) | C5—C4—C3 | 119.2 (4) |
| O3i—U1—O4 | 103.66 (10) | C5—C4—H4 | 120.4 |
| O1—U1—N1 | 89.42 (13) | C3—C4—H4 | 120.4 |
| O2—U1—N1 | 88.43 (13) | N1—C5—C4 | 122.8 (4) |
| O3—U1—N1 | 108.56 (10) | N1—C5—C6 | 115.1 (4) |
| O3i—U1—N1 | 71.44 (10) | C4—C5—C6 | 122.1 (4) |
| O4—U1—N1 | 173.19 (10) | N2—C6—C7 | 121.7 (4) |
| O1—U1—N2 | 76.01 (12) | N2—C6—C5 | 115.9 (4) |
| O2—U1—N2 | 101.52 (12) | C7—C6—C5 | 122.4 (4) |
| O3—U1—N2 | 163.57 (12) | C8—C7—C6 | 118.9 (4) |
| O3i—U1—N2 | 130.60 (10) | C8—C7—H7 | 120.5 |
| O4—U1—N2 | 121.97 (10) | C6—C7—H7 | 120.5 |
| O1—U1—N3 | 100.67 (13) | C7—C8—C9 | 119.4 (4) |
| O2—U1—N3 | 78.83 (13) | C7—C8—H8 | 120.3 |
| O3—U1—N3 | 133.88 (11) | C9—C8—H8 | 120.3 |
| O3i—U1—N3 | 166.46 (13) | C8—C9—C10 | 118.7 (4) |
| O4—U1—N3 | 70.03 (11) | C8—C9—H9 | 120.6 |
| N1—U1—N2 | 61.29 (11) | C10—C9—H9 | 120.6 |
| N1—U1—N3 | 115.77 (11) | N2—C10—C9 | 121.8 (4) |
| N2—U1—N3 | 60.44 (11) | N2—C10—C11 | 115.3 (4) |
| O3i—O3—U1i | 72.0 (2) | C9—C10—C11 | 122.8 (4) |
| O3i—O3—U1 | 70.9 (2) | N3—C11—C12 | 121.2 (4) |
| U1i—O3—U1 | 142.88 (13) | N3—C11—C10 | 115.4 (4) |
| N4—O4—U1 | 124.6 (3) | C12—C11—C10 | 123.3 (4) |
| C1—N1—C5 | 117.1 (4) | C13—C12—C11 | 118.4 (4) |
| C1—N1—U1 | 119.7 (3) | C13—C12—H12 | 120.8 |
| C5—N1—U1 | 121.8 (3) | C11—C12—H12 | 120.8 |
| C6—N2—C10 | 119.3 (4) | C12—C13—C14 | 120.9 (4) |
| C6—N2—U1 | 118.7 (3) | C12—C13—H13 | 119.6 |
| C10—N2—U1 | 117.7 (3) | C14—C13—H13 | 119.6 |
| C11—N3—C15 | 119.2 (4) | C13—C14—C15 | 117.7 (4) |
| C11—N3—U1 | 119.9 (3) | C13—C14—H14 | 121.2 |
| C15—N3—U1 | 119.1 (3) | C15—C14—H14 | 121.2 |
| O4—N4—O5 | 120.4 (4) | N3—C15—C14 | 122.4 (4) |
| O4—N4—O6 | 116.9 (4) | N3—C15—H15 | 118.8 |
| O5—N4—O6 | 122.7 (4) | C14—C15—H15 | 118.8 |
| N1—C1—C2 | 123.4 (4) |
| H··· | ||||
| C1—H1···O3i | 0.95 | 2.28 | 2.773 (6) | 112 |
| C1—H1···O4i | 0.95 | 2.59 | 3.225 (5) | 125 |
| C2—H2···O6i | 0.95 | 2.59 | 3.357 (6) | 137 |
| C3—H3···O1iii | 0.95 | 2.58 | 3.176 (6) | 121 |
| C4—H4···O1iii | 0.95 | 2.55 | 3.162 (6) | 122 |
| C12—H12···O5iv | 0.95 | 2.32 | 3.256 (6) | 169 |
| C14—H14···O6v | 0.95 | 2.48 | 3.246 (7) | 138 |
| C15—H15··· | 0.95 | 2.62 | 3.512 (5) | 157 |
| Atom | Deviation |
| U1 | 0.0370(0.0010) |
| O3 | 0.0090(0.0041) |
| O3i | 0.0555(0.0042) |
| O4 | -0.2956(0.0023) |
| N1 | 0.1666(0.0024) |
| N2 | -0.4723(0.0024) |
| N3 | 0.4999(0.0024) |
| U1O1 | 1.777(3) |
| U1O2 | 1.775(3) |
| U1O3 | 2.340(3) |
| U1O3i | 2.325(3) |
| U1O4 | 2.479(3) |
| U1N1 | 2.574(3) |
| U1N2 | 2.634(3) |
| U1N3 | 2.593(3) |
| O3O3i | 1.485(6) |
| O4N4 | 1.295(5) |
| O5N4 | 1.232(5) |
| O6N4 | 1.240(4) |
| O1U1O2 | 177.31(13) |
| O1U1O3 | 91.64(14) |
| O1U1O3i | 90.58(14) |
| O1U1O4 | 85.85(12) |
| O3iU1O3 | 37.12(13) |
| O3U1O4 | 66.75(10) |
| O1U1N1 | 89.42(13) |
| O3iU1N1 | 71.44(10) |
| O1U1N2 | 76.01(12) |
| O1U1N3 | 100.67(13) |
| O4U1N3 | 70.03(11) |
| N1U1N2 | 61.29(11) |
| N2U1N3 | 60.44(11) |
Symmetry code: (i) .
Hydrogen-bond geometry (, )
Cg2 is the centroid of the C6C10/N2 ring.
|
|
| H |
|
|
|---|---|---|---|---|
| C1H1O3i | 0.95 | 2.28 | 2.773(6) | 112 |
| C1H1O4i | 0.95 | 2.59 | 3.225(5) | 125 |
| C2H2O6i | 0.95 | 2.59 | 3.357(6) | 137 |
| C3H3O1ii | 0.95 | 2.58 | 3.176(6) | 121 |
| C4H4O1ii | 0.95 | 2.55 | 3.162(6) | 122 |
| C12H12O5iii | 0.95 | 2.32 | 3.256(6) | 169 |
| C14H14O6iv | 0.95 | 2.48 | 3.246(7) | 138 |
| C15H15 | 0.95 | 2.62 | 3.512(5) | 157 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .