Literature DB >> 21579030

μ-η:η-Peroxido-bis-[nitratodioxido-bis(pyrrolidin-2-one)uranium(VI)].

Koichiro Takao, Yasuhisa Ikeda.   

Abstract

In the crystal structure of the title compound, [U(2)(NO(3))(2)O(4)(O(2))(C(4)H(7)NO)(4)], two UO(2) (2+) ions are connected by a μ-η(2):η(2)-O(2) unit. The O(2) unit shows 'side-on' coordination to both U atoms. An inversion center is located at the midpoint of the O-O bond in the O(2) unit, affording a centrosymmetrically expanded dimeric structure. The U-O(axial) bond lengths are 1.777 (4) Å and 1.784 (4) Å, indicating that the oxidation state of U is exclusively 6+, i.e., UO(2) (2+). Furthermore, the O-O distance is 1.492 (8) Å, which is typical of peroxide, O(2) (2-). The U atom is eight-coordinated in a hexa-gonal-bipyramidal geometry. The coordinating atoms of the nitrate and pyrrolidine-2-one ligands and the μ-η(2):η(2)-O(2) (2-) unit are located in the equatorial plane and form an irregular hexa-gon. An inter-molecular hydrogen bond is found between N-H of the pyrrolidine-2-one ligand and the coordinating O of the same ligand in a neighboring complex. A second inter-molecular hydrogen bond is found between the N-H of the other pyrrolidine-2-one ligand and one of the uranyl oxido atoms.

Entities:  

Year:  2010        PMID: 21579030      PMCID: PMC2979215          DOI: 10.1107/S1600536810013449

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structural chemistry of uran­yl(VI)–peroxido complexes, see: Haegele & Boeyens (1977 ▶); Charpin et al. (1985 ▶); Doyle et al. (1993 ▶); Rose et al. (1994 ▶); Thuéry et al. (1999 ▶); de Aquino et al. (2001 ▶); John et al. (2004 ▶); Masci & Thuéry (2005 ▶); Zehnder et al. (2005 ▶); Kubatko et al. (2007 ▶); Ikeda et al. (2007 ▶); Takao et al. (2009 ▶); Vaska (1976 ▶).

Experimental

Crystal data

[U2(NO3)2O4(O2)(C4H7NO)4] M = 1036.50 Triclinic, a = 8.783 (2) Å b = 8.899 (3) Å c = 9.587 (3) Å α = 68.24 (3)° β = 81.30 (2)° γ = 68.96 (2)° V = 649.4 (3) Å3 Z = 1 Mo Kα radiation μ = 12.54 mm−1 T = 173 K 0.30 × 0.20 × 0.20 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: numerical (NUMABS; Higashi, 1999 ▶) T min = 0.117, T max = 0.188 5524 measured reflections 2934 independent reflections 2727 reflections with I > 2σ(I) R int = 0.037

Refinement

R[F 2 > 2σ(F 2)] = 0.026 wR(F 2) = 0.064 S = 1.00 2934 reflections 181 parameters H-atom parameters constrained Δρmax = 2.04 e Å−3 Δρmin = −0.97 e Å−3 Data collection: PROCESS-AUTO (Rigaku/MSC, 2006 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2006 ▶); program(s) used to solve structure: DIRDIF99 (Beurskens et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: CrystalStructure. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810013449/om2328sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810013449/om2328Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[U2(NO3)2O4(O2)(C4H7NO)4]Z = 1
Mr = 1036.50F(000) = 478
Triclinic, P1Dx = 2.650 Mg m3
a = 8.783 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.899 (3) ÅCell parameters from 6275 reflections
c = 9.587 (3) Åθ = 3.1–27.5°
α = 68.24 (3)°µ = 12.54 mm1
β = 81.30 (2)°T = 173 K
γ = 68.96 (2)°Platelet, orange
V = 649.4 (3) Å30.30 × 0.20 × 0.20 mm
Rigaku R-AXIS RAPID diffractometer2934 independent reflections
Radiation source: fine-focus sealed tube2727 reflections with I > 2σ(I)
graphiteRint = 0.037
Detector resolution: 10.00 pixels mm-1θmax = 27.5°, θmin = 3.1°
ω scansh = −11→11
Absorption correction: numerical (NUMABS; Higashi, 1999)k = −11→11
Tmin = 0.117, Tmax = 0.188l = −12→12
5524 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.026Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.064H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.0387P)2 + 2.5299P] where P = (Fo2 + 2Fc2)/3
2934 reflections(Δ/σ)max < 0.001
181 parametersΔρmax = 2.04 e Å3
0 restraintsΔρmin = −0.97 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
U10.21945 (2)0.38333 (2)0.134424 (19)0.01484 (7)
O10.1573 (5)0.2025 (6)0.2384 (5)0.0283 (9)
O20.2956 (6)0.5569 (5)0.0387 (5)0.0290 (9)
O3−0.0454 (5)0.5419 (7)0.0555 (5)0.0427 (13)
O40.0681 (4)0.5317 (5)0.3068 (4)0.0184 (7)
O50.3773 (5)0.2945 (5)0.3554 (4)0.0233 (8)
O60.5044 (5)0.1836 (5)0.1196 (4)0.0253 (8)
O70.3597 (5)0.2765 (6)−0.0771 (5)0.0274 (9)
O80.6150 (5)0.1159 (6)−0.0778 (5)0.0320 (10)
N1−0.1016 (6)0.7323 (6)0.4011 (5)0.0219 (9)
H1−0.11090.65870.49080.026*
N20.6174 (6)0.3525 (6)0.3046 (6)0.0252 (10)
H20.60930.39510.20620.030*
N30.4985 (6)0.1888 (6)−0.0142 (5)0.0220 (9)
C1−0.0129 (6)0.6859 (6)0.2925 (6)0.0162 (9)
C2−0.0222 (7)0.8410 (7)0.1547 (6)0.0232 (11)
H2A−0.08990.84780.07740.028*
H2B0.08790.83900.11140.028*
C3−0.1017 (7)0.9916 (7)0.2126 (6)0.0220 (11)
H3A−0.01841.03450.22840.026*
H3B−0.18251.08690.14080.026*
C4−0.1845 (8)0.9175 (7)0.3610 (7)0.0289 (13)
H4A−0.16880.95930.43840.035*
H4B−0.30280.94770.34840.035*
C50.5058 (6)0.2954 (7)0.3950 (6)0.0183 (10)
C60.5538 (7)0.2302 (9)0.5552 (7)0.0285 (12)
H6A0.57540.10510.60040.034*
H6B0.46710.28820.61500.034*
C70.7558 (8)0.3392 (9)0.3818 (8)0.0336 (14)
H7A0.77000.45240.35360.040*
H7B0.85800.25790.35740.040*
C80.7105 (8)0.2736 (9)0.5478 (7)0.0314 (13)
H8A0.69060.36260.59330.038*
H8B0.79930.17030.60250.038*
U11U22U33U12U13U23
U10.01539 (10)0.01631 (10)0.01212 (10)−0.00364 (7)−0.00246 (6)−0.00480 (7)
O10.026 (2)0.029 (2)0.036 (2)−0.0151 (17)0.0063 (17)−0.0150 (19)
O20.039 (2)0.024 (2)0.023 (2)−0.0135 (18)0.0088 (17)−0.0083 (17)
O30.030 (2)0.058 (3)0.033 (2)0.019 (2)−0.0158 (19)−0.035 (3)
O40.0237 (18)0.0151 (17)0.0135 (16)−0.0020 (14)−0.0020 (14)−0.0053 (14)
O50.0199 (18)0.034 (2)0.0158 (18)−0.0079 (16)−0.0062 (14)−0.0077 (16)
O60.0233 (19)0.030 (2)0.0205 (19)−0.0036 (16)−0.0038 (15)−0.0099 (17)
O70.026 (2)0.030 (2)0.0210 (19)0.0021 (16)−0.0052 (16)−0.0117 (17)
O80.024 (2)0.034 (2)0.034 (2)−0.0005 (17)0.0046 (17)−0.019 (2)
N10.031 (2)0.012 (2)0.018 (2)−0.0049 (17)0.0034 (18)−0.0043 (17)
N20.028 (2)0.027 (2)0.020 (2)−0.011 (2)−0.0015 (19)−0.006 (2)
N30.024 (2)0.022 (2)0.021 (2)−0.0057 (18)−0.0002 (18)−0.0099 (19)
C10.019 (2)0.016 (2)0.015 (2)−0.0066 (18)−0.0017 (18)−0.0056 (19)
C20.035 (3)0.017 (2)0.015 (2)−0.009 (2)0.001 (2)−0.002 (2)
C30.022 (2)0.019 (3)0.021 (3)−0.006 (2)−0.001 (2)−0.002 (2)
C40.036 (3)0.017 (3)0.025 (3)−0.002 (2)0.007 (2)−0.006 (2)
C50.021 (2)0.015 (2)0.015 (2)−0.0003 (18)−0.0060 (19)−0.0050 (19)
C60.027 (3)0.043 (4)0.020 (3)−0.015 (3)−0.005 (2)−0.011 (3)
C70.027 (3)0.039 (4)0.042 (4)−0.016 (3)0.001 (3)−0.018 (3)
C80.029 (3)0.041 (4)0.030 (3)−0.013 (3)−0.007 (2)−0.015 (3)
U1—O11.777 (4)N2—C71.464 (8)
U1—O21.784 (4)N2—H20.8800
U1—O3i2.303 (4)C1—C21.503 (7)
U1—O32.315 (4)C2—C31.534 (8)
U1—O52.428 (4)C2—H2A0.9900
U1—O42.436 (4)C2—H2B0.9900
U1—O62.515 (4)C3—C41.524 (8)
U1—O72.523 (4)C3—H3A0.9900
U1—N32.960 (5)C3—H3B0.9900
O3—O3i1.492 (8)C4—H4A0.9900
O3—U1i2.303 (4)C4—H4B0.9900
O4—C11.264 (6)C5—C61.494 (7)
O5—C51.247 (6)C6—C81.543 (8)
O6—N31.275 (6)C6—H6A0.9900
O7—N31.284 (6)C6—H6B0.9900
O8—N31.211 (6)C7—C81.523 (9)
N1—C11.305 (7)C7—H7A0.9900
N1—C41.465 (7)C7—H7B0.9900
N1—H10.8800C8—H8A0.9900
N2—C51.321 (7)C8—H8B0.9900
O1—U1—O2175.6 (2)O8—N3—O6122.6 (5)
O1—U1—O3i90.6 (2)O8—N3—O7122.2 (5)
O2—U1—O3i93.5 (2)O6—N3—O7115.2 (4)
O1—U1—O390.0 (2)O8—N3—U1176.9 (4)
O2—U1—O394.2 (2)O6—N3—U157.5 (2)
O3i—U1—O337.70 (19)O7—N3—U157.9 (2)
O1—U1—O583.92 (18)O4—C1—N1123.2 (5)
O2—U1—O592.05 (18)O4—C1—C2126.9 (5)
O3i—U1—O5173.10 (16)N1—C1—C2109.9 (4)
O3—U1—O5137.69 (14)C1—C2—C3103.7 (4)
O1—U1—O491.03 (16)C1—C2—H2A111.0
O2—U1—O489.17 (16)C3—C2—H2A111.0
O3i—U1—O4106.98 (13)C1—C2—H2B111.0
O3—U1—O469.31 (13)C3—C2—H2B111.0
O5—U1—O468.98 (13)H2A—C2—H2B109.0
O1—U1—O689.08 (17)C4—C3—C2104.6 (4)
O2—U1—O687.70 (18)C4—C3—H3A110.8
O3i—U1—O6117.42 (13)C2—C3—H3A110.8
O3—U1—O6155.09 (14)C4—C3—H3B110.8
O5—U1—O666.88 (13)C2—C3—H3B110.8
O4—U1—O6135.59 (13)H3A—C3—H3B108.9
O1—U1—O796.11 (18)N1—C4—C3103.3 (4)
O2—U1—O784.17 (17)N1—C4—H4A111.1
O3i—U1—O767.09 (14)C3—C4—H4A111.1
O3—U1—O7104.63 (14)N1—C4—H4B111.1
O5—U1—O7117.64 (13)C3—C4—H4B111.1
O4—U1—O7170.69 (12)H4A—C4—H4B109.1
O6—U1—O750.79 (13)O5—C5—N2125.9 (5)
O1—U1—N393.83 (17)O5—C5—C6123.6 (5)
O2—U1—N384.52 (17)N2—C5—C6110.5 (5)
O3i—U1—N392.51 (14)C5—C6—C8104.3 (5)
O3—U1—N3130.14 (14)C5—C6—H6A110.9
O5—U1—N392.10 (13)C8—C6—H6A110.9
O4—U1—N3159.86 (13)C5—C6—H6B110.9
O6—U1—N325.29 (13)C8—C6—H6B110.9
O7—U1—N325.54 (13)H6A—C6—H6B108.9
O3i—O3—U1i71.6 (3)N2—C7—C8104.1 (5)
O3i—O3—U170.7 (3)N2—C7—H7A110.9
U1i—O3—U1142.30 (19)C8—C7—H7A110.9
C1—O4—U1134.6 (3)N2—C7—H7B110.9
C5—O5—U1141.9 (4)C8—C7—H7B110.9
N3—O6—U197.2 (3)H7A—C7—H7B109.0
N3—O7—U196.6 (3)C7—C8—C6106.1 (5)
C1—N1—C4114.3 (5)C7—C8—H8A110.5
C1—N1—H1122.9C6—C8—H8A110.5
C4—N1—H1122.9C7—C8—H8B110.5
C5—N2—C7114.4 (5)C6—C8—H8B110.5
C5—N2—H2122.8H8A—C8—H8B108.7
C7—N2—H2122.8
O1—U1—O3—O3i−91.0 (5)U1—O6—N3—O8176.3 (5)
O2—U1—O3—O3i90.3 (5)U1—O6—N3—O7−3.9 (5)
O5—U1—O3—O3i−172.0 (3)U1—O7—N3—O8−176.3 (5)
O4—U1—O3—O3i177.9 (5)U1—O7—N3—O63.9 (5)
O6—U1—O3—O3i−3.2 (8)O1—U1—N3—O8−173 (7)
O7—U1—O3—O3i5.3 (5)O2—U1—N3—O83(7)
N3—U1—O3—O3i4.0 (6)O3i—U1—N3—O896 (7)
O1—U1—O3—U1i−91.0 (5)O3—U1—N3—O894 (7)
O2—U1—O3—U1i90.3 (5)O5—U1—N3—O8−89 (7)
O3i—U1—O3—U1i0.000 (2)O4—U1—N3—O8−69 (7)
O5—U1—O3—U1i−172.0 (3)O6—U1—N3—O8−93 (7)
O4—U1—O3—U1i177.9 (5)O7—U1—N3—O891 (7)
O6—U1—O3—U1i−3.2 (8)O1—U1—N3—O6−79.7 (3)
O7—U1—O3—U1i5.3 (5)O2—U1—N3—O696.2 (3)
N3—U1—O3—U1i4.0 (6)O3i—U1—N3—O6−170.5 (3)
O1—U1—O4—C1−144.0 (5)O3—U1—N3—O6−172.9 (3)
O2—U1—O4—C140.4 (5)O5—U1—N3—O64.4 (3)
O3i—U1—O4—C1−53.0 (5)O4—U1—N3—O623.9 (6)
O3—U1—O4—C1−54.3 (5)O7—U1—N3—O6−175.8 (5)
O5—U1—O4—C1132.9 (5)O1—U1—N3—O796.2 (3)
O6—U1—O4—C1126.3 (4)O2—U1—N3—O7−87.9 (3)
O7—U1—O4—C1−3.8 (11)O3i—U1—N3—O75.3 (4)
N3—U1—O4—C1111.9 (5)O3—U1—N3—O72.9 (4)
O1—U1—O5—C5149.6 (6)O5—U1—N3—O7−179.8 (3)
O2—U1—O5—C5−28.6 (6)O4—U1—N3—O7−160.2 (3)
O3i—U1—O5—C5−172.1 (11)O6—U1—N3—O7175.8 (5)
O3—U1—O5—C5−127.0 (6)U1—O4—C1—N1171.1 (4)
O4—U1—O5—C5−116.9 (6)U1—O4—C1—C2−9.6 (8)
O6—U1—O5—C558.0 (6)C4—N1—C1—O4179.5 (5)
O7—U1—O5—C555.9 (6)C4—N1—C1—C20.2 (7)
N3—U1—O5—C556.0 (6)O4—C1—C2—C3−166.8 (5)
O1—U1—O6—N3101.0 (3)N1—C1—C2—C312.5 (6)
O2—U1—O6—N3−82.0 (3)C1—C2—C3—C4−19.4 (6)
O3i—U1—O6—N310.7 (4)C1—N1—C4—C3−12.8 (7)
O3—U1—O6—N312.9 (6)C2—C3—C4—N119.4 (6)
O5—U1—O6—N3−175.2 (3)U1—O5—C5—N2−3.6 (9)
O4—U1—O6—N3−168.5 (3)U1—O5—C5—C6176.3 (4)
O7—U1—O6—N32.3 (3)C7—N2—C5—O5179.5 (5)
O1—U1—O7—N3−86.1 (3)C7—N2—C5—C6−0.4 (7)
O2—U1—O7—N389.5 (3)O5—C5—C6—C8−174.8 (5)
O3i—U1—O7—N3−174.2 (4)N2—C5—C6—C85.1 (7)
O3—U1—O7—N3−177.7 (3)C5—N2—C7—C8−4.6 (7)
O5—U1—O7—N30.2 (4)N2—C7—C8—C67.3 (7)
O4—U1—O7—N3134.0 (7)C5—C6—C8—C7−7.6 (7)
O6—U1—O7—N3−2.3 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···O4ii0.882.032.885 (6)165
N2—H2···O2iii0.882.313.127 (7)156
U1—O11.777 (4)
U1—O21.784 (4)
U1—O3i2.303 (4)
U1—O32.315 (4)
U1—O52.428 (4)
U1—O42.436 (4)
U1—O62.515 (4)
U1—O72.523 (4)
O3—O3i1.492 (8)
O1—U1—O2175.6 (2)
O3i—U1—O337.70 (19)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O4ii0.882.032.885 (6)165
N2—H2⋯O2iii0.882.313.127 (7)156

Symmetry codes: (ii) ; (iii) .

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Authors:  Koichiro Takao; Satoru Tsushima; Shinobu Takao; Andreas C Scheinost; Gert Bernhard; Yasuhisa Ikeda; Christoph Hennig
Journal:  Inorg Chem       Date:  2009-10-19       Impact factor: 5.165

6.  Comparative study of uranyl(VI) and -(V) carbonato complexes in an aqueous solution.

Authors:  Atsushi Ikeda; Christoph Hennig; Satoru Tsushima; Koichiro Takao; Yasuhisa Ikeda; Andreas C Scheinost; Gert Bernhard
Journal:  Inorg Chem       Date:  2007-04-07       Impact factor: 5.165

  6 in total
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1.  Uranyl dication mediated photoswitching of a calix[4]pyrrole-based metal coordination cage.

Authors:  Juhoon Lee; James T Brewster; Bo Song; Vincent M Lynch; Inhong Hwang; Xiaopeng Li; Jonathan L Sessler
Journal:  Chem Commun (Camb)       Date:  2018-08-21       Impact factor: 6.222

2.  Crystal structure of μ-peroxido-κ(4) O (1),O (2):O (1'),O (2')-bis-[(nitrato-κO)(2,2':6',2''-terpyridine-κ(3) N,N',N'')dioxidouranium(VI)].

Authors:  Takeshi Kawasaki; Takafumi Kitazawa
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-04-25
  2 in total

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