| Literature DB >> 25993007 |
Liang Sun1, Caiyou Hu2, Yu Qian3, Chenguang Zheng4, Qinghua Liang2, Zeping Lv2, Zezhi Huang5, Keyan Qi6, Jin Huang7, Qin Zhou2, Ze Yang1.
Abstract
BACKGROUND: Glucose homeostasis is a trait of healthy ageing and is crucial to the elderly, but less consideration has been given to the age composition in most studies involving genetics and hyperglycemia.Entities:
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Year: 2015 PMID: 25993007 PMCID: PMC4439071 DOI: 10.1371/journal.pone.0126696
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Demographic and metabolic characteristics of the study samples.
| LLI | MI_S | MI_N |
|
| |
|---|---|---|---|---|---|
| AGE (years) | 92.5±3.6 | 45.9±8.2 | 46.8±10.3 | <0.001 | <0.001 |
| Samples (n) | 506 | 830 | 701 | NA | NA |
| Gender (male %) | 26.5 | 66.3 | 55.9 | <0.001 | <0.001 |
| FH (%) | 42.0 | 48.1 | 44.7 | 0.028 | 0.341 |
| FPG (mmol/L) | 5.7±1.4 | 6.3±1.4 | 5.9±0.9 | 0.021 | 0.049 |
| HbA1c (%) | 5.9±1.8 | 6.1±2.2 | 6.0±2.6 | 0.033 | 0.027 |
| HOMA-IR | 2.2±0.4 | 2.6±1.1 | 2.4±0.7 | 0.014 | 0.018 |
| BMI (kg/m2) | 18.6±3.7 | 23.6±3.2 | 23.5±4.5 | <0.001 | <0.001 |
| SBP (mmHg) | 149.1±23.0 | 124.1±16.2 | 118.1±16.1 | <0.001 | <0.001 |
| DBP (mmHg) | 79.9±12.2 | 76.1±10.6 | 74.2±10.6 | 0.017 | <0.001 |
| TC (mmol/L) | 4.8±1.1 | 5.1±0.9 | 4.9±0.3 | 0.029 | 0.048 |
| TG (mmol/L) | 1.3±0.9 | 2.6±1.3 | 2.4±1.1 | <0.001 | <0.001 |
| HDL-cholesterol (mmol/L) | 1.3±0.3 | 1.2±0.2 | 1.2±0.2 | 0.347 | 0.281 |
| LDL-cholesterol (mmol/L) | 2.9±0.9 | 2.7±0.8 | 2.4±0.5 | 0.033 | 0.026 |
|
| 14.6 | 18.9 | 21.3 | 0.044 | 0.003 |
Data are shown as the mean±SD or n; FH: fasting hyperglycemia; LLI: long-lived individuals; MI_S: middle-aged controls (southern); MI_N: middle-aged (northern); HbA1c: hemoglobin A1c; HOMA-IR: homeostasis model assessment of insulin resistance; BMI: body mass index; SBP: systolic blood pressure; DBP: diastolic blood pressure; TC: total cholesterol; TG: triglyceride; HDL: high density lipoprotein; LDL: low density lipoprotein; NA: not available.
a p values of post-hoc pair-wise comparisons of the parameters between LLI and MI_S.
b p values of post-hoc pair-wise comparisons of the parameters between LLI and MI_N.
c after log-transformed to normalize skewed distribution.
d comparison of categorical variable based on Chi-square test.
Minor allele frequencies of the FOXO3 tSNPs in three cohorts.
| Variants in | Position | LLI (n = 506) | MI_S (n = 830) | MI_N (n = 701) | |||
|---|---|---|---|---|---|---|---|
| MAF |
| MAF |
| MAF |
| ||
| rs2802288 (G/A) | 109002908 | 0.33/0.41 | 0.014 | 0.31/0.33 | 0.310 | 0.29/0.32 | 0.170 |
| rs2802290 (A/G) | 109012373 | 0.30/0.36 | 0.040 | 0.31/0.34 | 0.151 | 0.29/0.33 | 0.097 |
| rs2802292 (T/G) | 109015211 | 0.31/0.38 | 0.019 | 0.29/0.33 | 0.077 | 0.30/0.32 | 0.267 |
| rs2764264 (T/C) | 109041154 | 0.33/0.39 | 0.053 | 0.30/0.33 | 0.173 | 0.29/0.31 | 0.293 |
| rs7341233 (T/C) | 109046973 | 0.17/0.18 | 0.717 | 0.18/0.19 | 0.646 | 0.18/0.19 | 0.657 |
| rs13217795 (T/C) | 109080791 | 0.30/0.35 | 0.111 | 0.27/0.30 | 0.335 | 0.25/0.27 | 0.336 |
| rs3800231 (G/A) | 109104959 | 0.33/0.36 | 0.281 | 0.29/0.31 | 0.244 | 0.28/0.30 | 0.450 |
MAF: minor allele frequency; FH: fasting hyperglycemia; LLI: long-lived individuals; MI_S: middle-aged controls (southern); MI_N: middle-aged (northern).
a the minor allele corresponds to the latter base in each description of variants, separated by a “/”.
b Position on Chromosome 6 (GRCh36/hg18).
c Comparisons under allele-contrast model between FH cases and contros.
Fig 1Graphical representation of the polymorphisms and LD structure across FOXO3 in the subjects of this study.
The FOXO3 locus consists of four exons (thin dark-shaded boxes represent UTRs, and thick dark-shaded boxes represent coding exons). The thin lines represent introns. The relative locations of seven variants are listed. Two linkage disequilibrium (LD) blocks are defined. The measures of LD (D’) among paired of variants are shown graphically by color (r2). A white box represents very low LD, and a dark box represents very high LD. The constitutions and frequencies of three common haplotypes in block 1 are listed.
Comparisons of effects on risk of FH between LLI and middle-aged subjects.
| Comparison | LLI (n = 506) | MI_S (n = 830) | MI_N (n = 701) | |||
|---|---|---|---|---|---|---|
| OR (95%CI) |
| OR (95%CI) |
| OR (95%CI) |
| |
| rs2802288 (G/A) | ||||||
| Modelcca | 0.72 (0.56–0.94) | 0.014 | 0.90 (0.73–1.10) | 0.310 | 0.85 (0.68–1.07) | 0.170 |
| Modeladj | 0.77 (0.50–0.99) | 0.019 | 0.94 (0.77–1.16) | 0.420 | 0.91 (0.72–1.14) | 0.372 |
| rs2802290 (A/G) | ||||||
| Modelcca | 0.76 (0.58–0.99) | 0.040 | 0.86 (0.70–1.06) | 0.151 | 0.83 (0.66–1.04) | 0.097 |
| Modeladj | 0.81 (0.62–1.05) | 0.128 | 0.90 (0.74–1.11) | 0.214 | 0.94 (0.75–1.17) | 0.301 |
| rs2802292 (T/G) | ||||||
| Modelcca | 0.73 (0.56–0.95) | 0.019 | 0.83(0.67–1.02) | 0.077 | 0.88 (0.70–1.10) | 0.267 |
| Modeladj | 0.67 (0.51–0.87) | 0.012 | 0.92 (0.75–1.13) | 0.171 | 1.04 (0.83–1.30) | 0.349 |
| Haplotype2:AGGC | ||||||
| Modelperm | 0.67 (0.51–0.87) | 0.019 | 1.09 (0.83–1.42) | 0.441 | 1.26(0.96–1.65) | 0.496 |
| Modeladj | 0.74 (0.57–0.95) | 0.043 | 1.12 (0.85–1.47) | 0.462 | 0.97 (0.74–1.28) | 0.253 |
LLI: long-lived individuals; MI_S: middle-aged controls (southern); MI_N: middle-aged (northern); FH: fasting hyperglycemia;Modelcca, Modeladj and Modelperm corresponded to allele contrast, adjusted for confounding factors (BMI, age, gender, drinking, current smoking and APOE*e4 status) and permutation corrections for multiple comparisons (n = 8000).
a between Haplotype2 and all other haplotypes combine.
Fig 2Comparisons of alleles and haplotypes in FOXO3 and tertiles of hyperglycemia related parameters in each cohort.
MAF: minor allele frequency; T1,T2 and T3 represents the lowest, middle and highest tertile, respectively. p-values were obtained from logistic regression analysis adjusted for age and gender. Only in LLI, was a significant contribution of FOXO3 found. Both frequencies of rs2802288*A and rs2802292*G were reduced when A) fasting plasma glucose and B) HbA1c increased. C) The frequency of Haplotype 2 “AGGC” in block 1 decreased when fasting plasma glucose increased. D) The frequency of rs2802292*G decreased when HOMA-IR increased.
Fig 3Schematic of the potential hypothesis for an inconsistence in genetic and environmental determinants across human lifespan.
SNPs having more severe effects on glucose homeostasis are likely to have resulted in earlier mortality, removing them/their effects from the long-lived cohort, and that this allows them to easier detect other variants having more modest effects.