Literature DB >> 25992719

Modeling macromolecular motions by x-ray-scattering-constrained molecular dynamics.

Robert P Rambo1, John A Tainer2.   

Abstract

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Year:  2015        PMID： 25992719      PMCID： PMC4457040          DOI： 10.1016/j.bpj.2015.04.023

Source DB:  PubMed          Journal:  Biophys J        ISSN： 0006-3495            Impact factor:   4.033


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  13 in total

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Journal:  Curr Opin Struct Biol       Date:  2004-02       Impact factor: 6.809

2.  Refinement of multidomain protein structures by combination of solution small-angle X-ray scattering and NMR data.

Authors:  Alexander Grishaev; Justin Wu; Jill Trewhella; Ad Bax
Journal:  J Am Chem Soc       Date:  2005-11-30       Impact factor: 15.419

3.  A target function for quaternary structural refinement from small angle scattering and NMR orientational restraints.

Authors:  Frank Gabel; Bernd Simon; Michael Sattler
Journal:  Eur Biophys J       Date:  2006-01-14       Impact factor: 1.733

4.  Interpretation of solution x-ray scattering by explicit-solvent molecular dynamics.

Authors:  Po-Chia Chen; Jochen S Hub
Journal:  Biophys J       Date:  2015-05-19       Impact factor: 4.033

5.  Validating solution ensembles from molecular dynamics simulation by wide-angle X-ray scattering data.

Authors:  Po-Chia Chen; Jochen S Hub
Journal:  Biophys J       Date:  2014-07-15       Impact factor: 4.033

6.  Comprehensive macromolecular conformations mapped by quantitative SAXS analyses.

Authors:  Greg L Hura; Helen Budworth; Kevin N Dyer; Robert P Rambo; Michal Hammel; Cynthia T McMurray; John A Tainer
Journal:  Nat Methods       Date:  2013-06       Impact factor: 28.547

7.  Normal Mode Flexible Fitting of High-Resolution Structures of Biological Molecules Toward SAXS Data.

Authors:  Christian Gorba; Florence Tama
Journal:  Bioinform Biol Insights       Date:  2010-06-21

8.  Review of the fundamental theories behind small angle X-ray scattering, molecular dynamics simulations, and relevant integrated application.

Authors:  Lauren Boldon; Fallon Laliberte; Li Liu
Journal:  Nano Rev       Date:  2015-02-25

9.  Sliding rocks on Racetrack Playa, Death Valley National Park: first observation of rocks in motion.

Authors:  Richard D Norris; James M Norris; Ralph D Lorenz; Jib Ray; Brian Jackson
Journal:  PLoS One       Date:  2014-08-27       Impact factor: 3.240

10.  Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS).

Authors:  Greg L Hura; Angeli L Menon; Michal Hammel; Robert P Rambo; Farris L Poole; Susan E Tsutakawa; Francis E Jenney; Scott Classen; Kenneth A Frankel; Robert C Hopkins; Sung-Jae Yang; Joseph W Scott; Bret D Dillard; Michael W W Adams; John A Tainer
Journal:  Nat Methods       Date:  2009-07-20       Impact factor: 28.547
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  2 in total

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Journal:  Biochemistry       Date:  2017-07-03       Impact factor: 3.162

2.  Discriminative SKP2 Interactions with CDK-Cyclin Complexes Support a Cyclin A-Specific Role in p27KIP1 Degradation.

Authors:  Marco Salamina; Bailey C Montefiore; Mengxi Liu; Daniel J Wood; Richard Heath; James R Ault; Lan-Zhen Wang; Svitlana Korolchuk; Arnaud Baslé; Martyna W Pastok; Judith Reeks; Natalie J Tatum; Frank Sobott; Stefan T Arold; Michele Pagano; Martin E M Noble; Jane A Endicott
Journal:  J Mol Biol       Date:  2021-01-07       Impact factor: 5.469
  2 in total

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