Hao Zhang1, Zimu Xu2, Jie Shen3, Xu Li1, Lili Ding1, Jie Ma4, Yan Lan3, Weidong Xia5, Cheng Cheng6, Qiang Sun2, Zelong Zhang2, Paul K Chu7. 1. School of Life Science, University of Science and Technology of China, Hefei, Anhui Province 230026, People's Republic of China. 2. Department of Thermal Science and Energy Engineering, University of Science and Technology of China, Hefei, Anhui Province 230026, People's Republic of China. 3. 1] nstitute of Plasma Physics, Chinese Academy of Sciences, P. O. Box 1126, Hefei 230031, P. R. China [2] Center of Medical Physics and Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, People's Republic of China. 4. Center of Medical Physics and Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, People's Republic of China. 5. 1] School of Life Science, University of Science and Technology of China, Hefei, Anhui Province 230026, People's Republic of China [2] Department of Thermal Science and Energy Engineering, University of Science and Technology of China, Hefei, Anhui Province 230026, People's Republic of China. 6. 1] nstitute of Plasma Physics, Chinese Academy of Sciences, P. O. Box 1126, Hefei 230031, P. R. China [2] Center of Medical Physics and Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei 230031, People's Republic of China [3] Department of Physics and Materials Science, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China. 7. Department of Physics and Materials Science, City University of Hong Kong, Tat Chee Avenue, Kowloon, Hong Kong, China.
Abstract
Proteins are carriers of biological functions and the effects of atmospheric-pressure non-thermal plasmas on proteins are important to applications such as sterilization and plasma-induced apoptosis of cancer cells. Herein, we report our detailed investigation of the effects of helium-oxygen non-thermal dielectric barrier discharge (DBD) plasmas on the inactivation of lactate dehydrogenase (LDH) enzyme solutions. Circular dichroism (CD) and dynamic light scattering (DLS) indicate that the loss of activity stems from plasma-induced modification of the secondary molecular structure as well as polymerization of the peptide chains. Raising the treatment intensity leads to a reduced alpha-helix content, increase in the percentage of the beta-sheet regions and random sequence, as well as gradually decreasing LDH activity. However, the structure of the LDH plasma-treated for 300 seconds exhibits a recovery trend after storage for 24 h and its activity also increases slightly. By comparing direct and indirect plasma treatments, plasma-induced LDH inactivation can be attributed to reactive species (RS) in the plasma, especially ones with a long lifetime including hydrogen peroxide, ozone, and nitrate ion which play the major role in the alteration of the macromolecular structure and molecular diameter in lieu of heat, UV radiation, and charged particles.
Proteins are carriers of biological functions and the effects of atmospheric-pressure non-thermal plasmas on proteins are important to applications such as sterilization and plasma-induced apoptosis of cancer cells. Herein, we report our detailed investigation of the effects of helium-oxygen non-thermal dielectric barrier discharge (DBD) plasmas on the inactivation of lactate dehydrogenase (LDH) enzyme solutions. Circular dichroism (CD) and dynamic light scattering (DLS) indicate that the loss of activity stems from plasma-induced modification of the secondary molecular structure as well as polymerization of the peptide chains. Raising the treatment intensity leads to a reduced alpha-helix content, increase in the percentage of the beta-sheet regions and random sequence, as well as gradually decreasing LDH activity. However, the structure of the LDH plasma-treated for 300 seconds exhibits a recovery trend after storage for 24 h and its activity also increases slightly. By comparing direct and indirect plasma treatments, plasma-induced LDH inactivation can be attributed to reactive species (RS) in the plasma, especially ones with a long lifetime including hydrogen peroxide, ozone, and nitrate ion which play the major role in the alteration of the macromolecular structure and molecular diameter in lieu of heat, UV radiation, and charged particles.
Owing to advantages such as production of highly reactive species at low temperature and
flexible operation12, atmospheric-pressure non-thermal plasmas have
attracted much attention in biology and biomedicine3 and applications
include plasma sterilization4567891011, living tissue
treatment12, blood coagulation13, cell detachment1415, induction of apoptosis161718, cell
proliferation19, cancer therapy2021222324, and
so on. However, even though the biological effects of atmospheric-pressure plasmas have
been investigated and several possible mechanisms have been suggested, systematic
verification of these hypotheses is still lacking and the precise mechanism is still not
well understood. To gain further insight, it is necessary to study not only the
biological effects of cells and tissues, but also their interaction with cold plasmas on
the molecular level. Proteins are the main vehicles of biological functions and account
for 68% of the dry weight of cells and tissues. There have been investigations on the
use of atmospheric-pressure plasmas to modify the secondary structure of proteins in
aqueous solutions and inactivate infectious prion proteins under dry conditions. For
example, discharge plasmas inactivate and induce Heme degradation of horseradishperoxidase in the phosphate buffer (PBS) solution25, inactivates lysozyme
in an aqueous solution26, activates lipase in the PBS solution27, and inactivates polyphenoloxidase (PPO) and peroxidase (POD) in a model
food system28. However, in spite of recent progress, the molecular
mechanism between plasmas and enzymatic activity is still unclear. In this work
described in this paper, a dielectric barrier discharge (DBD) plasma is used to treat
lactate dehydrogenase (LDH), an important sugar metabolic enzyme2930
and the mechanism of protein inactivation and effects on cell metabolism are
investigated.
Results and discussion
Emission spectrometry and mass spectrometry of DBD plasmas
The typical optical spectrum of the helium-oxygenDBD plasma (Fig.
1) between 200 and 900 nm is displayed in Fig. 2. The dominant emission lines illustrate the presence of the
metastable helium atom He (728.1 nm, 706.5 nm,
667.8 nm, 587.5 nm, 501.5 nm,
447.1 nm and 388.8 nm), OH radical
(306-310 nm), and atomic oxygen (OI: 799.5 nm,
777.2 nm, 715.7 nm; OII: 656.5 nm, and
578.4 nm). In addition, the detected reactive species associated
with nitrogen are excited nitrogen molecules between 300 and
400 nm.
Figure 1
The atmospheric-pressure DBD plasma device.
Figure 2
Optical emission spectra of the helium-oxygen DBD plasma.
Figures 3(a) depict the time-averaged mass spectra of
positive and negative ions obtained at a distance of 5 mm from the
bottom of the quartz glass DBD plasma to the orifice of the mass spectrometer.
Ions up to 100 amu are detected. The positive mass spectrum in Fig. 3a shows about there are 10 predominant species in the
helium-oxygen plasma, namely O2+,
H3O+,
H3O+(H2O), N2+,
O+, NO+, as well as small portions of
H2O+, N2H+,
NO2+. In the negative spectrum in Fig. 3(b), more than 10 species are detected and the main species
are O−, OH−,
H3O−,
O2−,
(OH)O−,
OH−(H2O),
NO2−,
O3−, and
NO3−.
Figure 3
Mass spectra of the helium-oxygen DBD plasma: (a) Positive ions,
(b) Negative ions.
The DBD plasma produces a variety of ions and free radicals in the gas phase.
These active ions and free radicals react with water and produce various
biologically active reactive species (RS) in the liquid phase such as ones with
a long lifetime including hydrogen peroxide (H2O2), ozone
(O3), and nitrate ion
(NO3−) as well as short-lived RS including
hydroxyl radical (OH−), superoxide
(O2−), and singlet oxygen31. Ozone is produced in the DBD plasma by the interaction between
atomic oxygen and oxygen in the gas phase and then spreads into the liquid
phase. Oxygen reduction by two electrons forms hydrogen peroxide, while the
nitrate ion is produced by the reaction between nitrogen dioxide and water. In
this study, some known long-lived species in the liquid are measured and the
possible production mechanism is shown in Table 1. RS is
highly reactive which can mediate the bio-macromolecules via the cell
membrane or intercellularly. By comparing the direct treatment of LDH with
indirect treatment, the effects of the short-lived RS in the liquid phase can be
explored.
Table 1
DBD plasma production of biologically relevant RS.
RS
Formula
Plasma reactions
Hydrogen peroxide
H2O2
H2O+ + H2O → OH• + H3O+
OH• + OH• → H2O2
Ozone
O3
O + O + M → O2 + Ma)
O + O2 + O2 → O3 + O2
O + O2 → O2+O2
Nitrate
NO3−
NO + O3 → NO2 + O2
2NO2 + H2O→ HNO2 + HNO3
Ma), Third body particle.
Concentration of RS
The sample solutions were treated by the non-thermal DBD plasma. Since the LDH
enzyme is dissolved in PBS, the RS in PBS created by the plasma are expected to
affect the LDH enzyme. Figure 4 shows the RS
concentrations including those of ozone, hydrogen peroxide, and nitrate ion for
different treatment time. The RS concentrations increase with the plasma
exposure time. The hydrogen peroxide, nitrate ion, and ozone concentrations
increase from 0.077 mg/L to 158.5 mg/L,
0.098 mg/L to 25.5 mg/L, and 0.34 mg/L to
3.6 mg/L, respectively, after 300 s.
Figure 4
Concentrations of reactive species as a function of treatment time between 0
and 300 s.
The RS concentrations after storage (0 to 24 h) are monitored as
shown in Fig. 5 which shows two different trends for the
three kinds of long-lived RS. For ozone and hydrogen peroxide, the
concentrations decrease within 24 h. The concentration of ozone
drops from 3.6 mg/L to 2.9 mg/L whereas that of hydrogen
peroxide diminishes from 158 mg/L to 103.5 mg/L.
However, the nitrate ion content rises from 25.5 mg/L to
27.1 mg/L in the first 3 hours possibly due to oxidation
of nitrite ions and then stabilizes in the remaining time.
Figure 5
Concentrations of reactive species after plasma treatment for
300 s treatment and different storage time from 0 to
24 h.
Inactivation of LDH by plasma treatment
The LDH protease solution is exposed to the helium-oxygen non-thermal dielectric
barrier discharge plasma directly and indirectly and the absolute LDH activity
is assessed after treatment for one hour. As shown in Fig.
6, the LDH activity decreases steadily with exposure time regardless
of treatment modes revealing that inactivation of the LDH activity increases
with time. Compared to the direct treatment, reduction of the LDH activity is
less in the indirect treatment for the same time. However, as reported
previously on lipase treated by a plasma jet2732, there is no
difference in the enzymatic activity between the direct and indirect treatment.
This may be due to the special physical and chemical properties of proteins and
difference in the sensitivity of different proteins for different plasma. In our
study, the difference in LDH enzymatic activity between the direct treatment and
indirect treatment can be attributed to the difference in the RS in the two
modes. Compared to the indirect treatment, besides the effects of the long-lived
RS (hydrogen peroxide, ozone, and nitrate ions in the PBS solution), there are
short-lived RS such as OH˙,
O2−, and O2
(1Δg) as well as UV in the direct treatment3133343536. Hence, the RS may be responsible for the
slightly larger effects in the direct treatment.
Figure 6
Plasma inactivation kinetics of LDH in the direct and indirect modes for
different treatment time from 0 to 300 s.
To investigate the continuous effects of the LDH activity after plasma treatment,
the LDH is treated for 300 s in both the direct and indirect modes.
The treated LDH samples are stored at 4 °C and the
activity is monitored at different time points. The change in the enzyme
activity with storage time is shown in Fig. 7. The enzyme
activity declines quickly in the first three hours and then gradually from three
to twelve hours. The results indicate that there are continuous effects on the
LDH activity regardless of treatment modes attributable to the long-lived RS
(hydrogen peroxide, ozone, and nitrate ion) in the PBS created by the DBD
plasma. Hydrogen peroxide can oxidize proteins effectively causing the protein
to denature as follows37:
Figure 7
Residual activity of LDH after plasma treatment for 300 s and
storage from 0 to 24 h.
In addition, many amino acids can be modified by ozone38, for
example,With regard to nitrate ions, conformational change or protein denaturation result
from changing the electrical charges3940. In comparison with
the indirect treatment, the decrease in the LDH activity is smaller in the
direct treatment, suggesting that the short-lived RS (OH˙,
O2−, and O2
(1Δg)) and UV produce only minor effects on the
LDH activity. Therefore, the possible mechanism of the continuous effect on
protein by DBD plasma is due to hydrogen peroxide4142, ozone,
and nitrate ions which cause chemical modification of the LDH molecule or
between the molecules254344. More experiments are needed to
clarify the synergistic effects. As shown in Fig. 7, the
LDH enzyme activity exhibits an unexpected increase after storage for
24 hours. This phenomenon indicates some
“re-naturing” of the LDH protease after the DBD plasma
treatment after a while. A possible reason is that after a long time, the
inactivation effect is reversible or the functional domains that are hidden in
the interior of the hydrophilic amino acids induced by the DBD plasma are
exposed again. This topic will be discussed further later.
CD analysis
Figures 8(a) depict the CD spectra of the LDH after direct
and indirect treatment for 0-300 s and one hour after the plasma
treatment. The spectra show the typical negative peak at 208 nm
corresponding to the percentage of the α-helical structure in the
enzyme and a shoulder at 218 nm indicating the percentage of the
β-sheet structure. Flattening of these two regions with increasing
plasma exposure times indicates reduction in the helical structure and larger
β-sheet content. In addition, there is a positive peak at
230 nm and the negative peak represents the turn at
200 nm. The changes illustrate that the secondary structure of the
proteins change with treatment time depending on the concentration of RS in the
PBS created by the plasma.
Figure 8
CD spectra and secondary structure percentages of the LDH solution after
direct and indirect treatment for 0-300 s: (a) LDH after
direct treatment, (b) LDH after indirect treatment, and (c)
Exact percentages of the different secondary structures of the LDH protease
solution.
The exact percentages of the different structures are calculated from the
corrected spectra. The ordered secondary structure of LDH mostly consists of
α-helices and turns and the relative content of the
β-sheet structure is smaller. As shown in Fig.
8(c), the amounts of turns and α-helix structure decrease
drastically with treatment time while the number of random areas and
particularly amount of β-sheet structures increase strikingly,
indicating that the secondary structure of the LDH enzyme is altered by the
plasma. In the LDH solution after the direct treatment, the α-helix
content decreases from 33.20 to 20.60%, whereas the β-sheet content
increases from 12.30 to 22.70% after treatment for 300 s. In the
indirect treatment, the α-helix content decreases from 33.10 to
22.60% and the β-sheet content increases from 12.30 to 21.70%. The
loss in the α-helix content and increase in the β-sheet
content are similar in both treatment modes, indicating that the long-lived RS
in the PBS may play primary roles in the structural changes in the LDH
enzyme354546.In a complex plasma, many reactions can cause conformational and secondary
structural changes, but all of them are likely initiated by the inherent RS36. These RS are able to cleave peptide bonds and modify amino acid
chains thereby producing secondary structure changes. The sulfur-containing
amino acids such as cysteine and aromatic amino acids are particularly
susceptible. Concerning LDH, the active sites are more flexible compared with
the other structure and these amino acids such as Arg-171, His-195, Arg-109 and
Asp-168 play a key role in the active sites47 and all are
involved in the formation of the α-helical structure. Therefore,
there is a strong correlation between the enzyme activity and
α-helical structure. Oxidation of even one single amino acid in the
protein can affect its function. For example, oxidation of histidine-195 at the
active side of the LDH can result in loss of activity because the active sites
cannot combine with the substrate.Figures 9(a) show the CD spectra after storing at
4 °C for different time after plasma treatment for
300 s directly and indirectly, respectively. The DBD plasma has
continuous effects on the secondary structure of LDH protease but the effects
are attenuated after storage and as shown in Fig. 9(c),
after storage for 24 h, the second structures exhibit recovery which
coincides with that of the enzyme activity further demonstrating that the change
in enzyme activity is associated with the change of secondary structure induced
by DBD plasma48.
Figure 9
CD spectra and secondary structure percentages of the LDH solution after
direct and indirect treatment for 300 s and storage from 0 to
24 h: (a) LDH after direct treatment, (b) LDH
after indirect treatment, and (c) Exact percentages of the different
secondary structures of the LDH protease solution.
DLS analysis
The hydrodynamic radius and particle distribution of the LDH protease solution
are determined by means of dynamic light scattering by analyzing the combined
behavior to better understand the effects of atmospheric-pressure plasma on LDH.
The hydrodynamic radius of the LDH protease solution in the different treatment
modes for different treatment time are shown in Figs. 10
and 11, respectively. Figures
10(a) and 11(a) show that the LDH protease
solution without the treatment has a mass peak of the contribution ratio of
100%, molecular radius of 4.9 nm, and molecular weight of
140 kDa. As shown in Figs. 10(b) and 11(b), the average hydrodynamic radius increases with
treatment time and the particle distribution also changes. The results indicate
that the DBD plasma can promote molecular aggregation between the LDH molecules
in this concentration range to generate larger and more complex
supramolecules4950. A possible explanation involves the
modification of amino acid, electrostatic interactions, and hydrophobic
interactions. Ozone (O3)38 and particularly hydrogen
peroxide (H2O2)37 are able to oxidize the
amino acid side chains (cysteine) to form protein–protein
cross-linkage515253. In the direct treatment for
180 s, the hydrodynamic radius and molecular weight increase to
15.5 nm and 2056 kDa, respectively (Fig.10 (b)) and these values are larger than those after the
indirect treatment (Fig.11 (b)). These differences may be
attributed to the effects of UV radiation and short-lived reactive species
created by the plasma. Figures 10(c) and 11(c) show two new peaks after plasma treatment for
300 s. A possible mechanism is that weak stability of the irregular
supramolecules which further polymerize with increasing treatment time. After a
high degree of polymerization, the supramolecules disintegrate to two new
polymeric molecules spontaneously5455.
Figure 10
DLS spectra of directly treated LDH for 0-300 s: (a)
0 s, (b) 180 s, and (c)
300 s.
Figure 11
DLS spectra of the indirectly treated LDH for 0-300 s: (a)
0 s, (b) 180 s, and (c)
300 s.
The DBD plasma continuous effect on the hydrodynamic radius and particle
distribution of LDH protease solution are assessed. As shown in Figs. 10 and 11, polymerization increases in
the initial 12 hours and the hydrodynamic radius of the new
supramolecules gradually increases (Figs. 12(a); Figs. 13(a)). Moreover, the DLS spectrum acquired after
24 hours shows that there are new small polymers (Fig. 12(c) and 13(c)). A possible explanation
is that the supramolecules disintegrate into two new polymeric molecules
spontaneously and this is the major reason for the aforementioned enzyme
recovery.
Figure 12
DLS spectra of the directly treated LDH for 300 s and storage for
0, 12, and 24 h: (a) 0 h, (b) 12 h,
and (c) 24 h.
Figure 13
DLS spectra of the indirectly treateld LDH for 300 s and storage
for 0, 12, and 24 h: (a) 0 h, (b)
12 h, and (c) 24 h.
Based on the above results, there is a strong correlation between the loss in the
enzyme activity and change in the molecular structure depending on the RS
produced by DBD plasma. The molecular mechanism of LDH inactivation can be
described as follows. First, in the molecule, some important amino acids are
modified by the RS and the secondary structure changes, especially the structure
of the active center, and the active sites lose recognition and catalytic
functions. Secondly, between the molecules, the peptide chains polymerize to
form irregular supramolecules which wrap up the small quantity of active sites
and hence, the LDH is unable to participate in the catalytic reaction.
Aggregation of molecules decreases the enzyme activity and also protects the
active sites from being modified by RS. When the supramolecules disintegrate
spontaneously after storing for a long time, the protected active sites are
exposed again causing recovery as shown in Fig. 14. All
in all, the changes in the secondary structure and hydrodynamic radius coincide
with the loss and recovery of the enzyme activity. The results suggest that the
enzymatic activity change arises from not only intramolecular chemical
modification, but also intermolecular aggregation.
Figure 14
Molecular mechanism showing recovery of the LDH enzyme activity.
pH and temperature
The relationship between the temperature and pH of the LDH protease solution with
treatment time is shown in Fig. 15. The highest
temperature is 24 °C after plasma exposure for
300 s and the pH remains at about 7.5 before and after the plasma
treatment because the PBS has the buffering capability. Since the temperature
and pH do not reach values that can cause enzyme inactivation, their effects can
be neglected.
Figure 15
Temperature and pH time profile of the plasma-treated PBS.
Conclusion
A helium-oxygen non-thermal DBD plasma is employed to treat LDH as a model enzyme in
PBS. The concentrations of the long-lived RS in the plasma-treated PBS, for
instance, hydrogen peroxide, nitrate ions, and ozone, increase with treatment time
but decrease with storage time except nitrate. The LDH activity decreases
significantly with plasma treatment time or storage time in the first
12 h regardless of treatment modes, but recovers slightly after storing
for 24 h. The CD and DLS results suggest the mechanisms to explain the
change in the LDH activity. It is likely due to modification of the secondary
structure in the molecule and peptide chain polymerization between the molecules as
a result of the reactive species created by the DBD plasma. By comparing the direct
and indirect plasma treatment, the changes in the LDH activity can be attributed to
the RS, especially long-lived ones such as hydrogen peroxide, ozone, and nitrate ion
instead of heat, UV radiation, and charged particles.
Materials and methods
Discharge Apparatus and Plasma treatment
The atmospheric-pressure DBD plasma is depicted in Fig. 1.
The DBD plasma reactors consist of a hollow plexiglass as a reactor chamber on
which there are two air inlet and outlet holes. The high-voltage electrode is a
32 mm diameter copper cylinder covered by 1 mm thick
quartz glass as the insulating dielectric barrier and the ground electrode is a
37 mm diameter copper cylinder. The discharge gap between the bottom
of the quartz glass and sample surface is 5 mm. An alternating
current power supply operating in frequencies between 10 and 42 kHz
with variable output voltages between 0 and 50 kV (peak to peak) is
used.Helium (99.99% pure) and oxygen (99.99% pure) were the carrier gases and the flow
rates regulated by flow meters were 80 L/h and 10 L/h,
respectively. In order to eliminate as much air from the reactor chamber as
possible, the working gas was bled into the chamber for 5 minutes
before the experiment. The non-thermal DBD plasma was generated at voltage of
14 kV (peak to peak) at a frequency of 24 kHz with a
discharge power density of about 1 W/cm2. One ml of
the LDH enzyme solutions in a 35 mm diameter petri dish was treated
by the DBD plasma and they were put on ice and stored in a cool bag in order to
avoid unintentional inactivation after the treatment. In addition, because the
depth of plasma penetration was limited, neither charged particles nor reactive
species generated in the plasma could interact directly with the LDH in the
solution. Hence, we investigated the LDH treated by direct and indirect plasma
treatment to demonstrate the inactivation effects of the reactive species
induced by the plasma. In the direct treatment, the plasma was used to treat the
LDH enzyme solution whereas in the indirect treatment, the solution without LDH
was first exposed to the plasma followed by introduction of the protein to the
treated solution instantly.
Atomic emission spectrometry and molecular-beam mass
spectrometry
The optical emission spectra of the helium-oxygen non-thermal dielectric barrier
discharge (DBD) plasmas were acquired on the AvaSpec-2048-8-RM spectrometer
equipped with gratings of 2,400 grooves/mm at a spectral range
between 200 and 900 nm. A molecular-beam mass spectrometer (MBMS,
Hiden EQP mass/energy analyzer HPR 60) was operated in the time-averaged mode.
The distance between the bottom of the quartz glass of the DBD plasma and
orifice of the mass spectrometer was 5 mm.
Enzymes
LDH (from rabbit muscle, Type V, HM0037, sigma-Aldrich, Shanghai, China) in the
mitochondria of eukaryotic cells as tetramer can catalyze dehydrogenation of
lactate to pyruvate which can take part in the Krebs cycle to provide energy to
the cells or organism. The samples were dissolved in phosphate buffer solution
(PBS, pH = 7.5) to an initial concentrations of
5 mg/ml and ultrasonically degassed. The enzyme solutions were
divided into small portions of 1 ml, put into 1.5 ml
centrifuge tubes, and stored at −20 °C until
usage. These stock solutions were prepared once for the whole study.
Enzyme activity assays
The LDH activity was monitored using the double antibody sandwich method. The
purified rabbit LDH antibody was used to coat the microtiter plate wells and
make the solid-phase antibody. The LDH antibody was mixed with horseradishperoxidase (HRP) to form the antibody-antigen-enzyme-antibody complex. After
washing and addition of tetramethylbenzidine (TMB), the solution turned blue due
to the HRP enzyme-catalyzed reaction. Sulfuric acid was added and the color
change was monitored spectrophotometrically at 450 nm. The
concentration of the rabbit LDH was determined by comparing the optical density
(OD) with the standard curve. The absorbance was determined with respect to a
value on a microplate reader (Varioskan Flash, Thermo Scientific, Finland). The
measurement was completed within 15 min after adding the solution
and the LDH liquid samples were diluted five times prior to the measurement. The
enzyme activity was expressed as the absolute one and the error represented the
standard deviation derived from at least six independent measurements.
Circular dichroism spectroscopy
The CD spectra were acquired in the UV range from 200 to 250 nm on a
Jasco-810-CD spectropolarimeter (Japan Spectroscopic Company, Tokyo, Japan) with
a 500 μl sample quartz cup. The LDH enzyme solutions
were diluted from 5 mg/ml to 0.15 mg/ml before the CD
spectra were obtained. The quartz sample cup was cleaned by doubly distilled
water and the secondary structure fractions were calculated from the spectra
using the CD analysis software. The absorbance was also measured at
25 °C.
Dynamic light scattering (DLS)
The samples were injected into a sample cell (50 μl) in
the Dynapro-MS800 (ATC, England) instrument illuminated by a 25 mW
and 750 nm solid-state laser at a fixed scattering angle
θ = 90o equipped with a
digital autocorrelator. The delay time was linearly spaced to sample the broad
distributions properly. The measurements were performed at
25 °C and the data were then collected after temperature
stabilization for 10 to 15 min. Before the test, the samples were
filtered using inorganic membrane filters (whatman, Anatop10 Plus,
0.22 μm), centrifuged at 10,000 rpm for
10 minutes, and degassed while attention was paid to make sure there
were no bubbles in the samples.The particle size was related to the translational diffusivity (D) and the
instrument calculated the diffusivity (D) of the molecules in the sample based
on autocorrelation of the scattered light intensity. The hydrodynamic radius of
the molecules was derived from D using a uniform sphere and
Stokes–Einstein equation,
D = kT/6 πηr, where
k is Boltzmann’s constant, T is the absolute temperature,
η is the viscosity of the liquid in which the particle is moving,
and r is the hydrodynamic diameter56. This equation assumes that
the particles move independently of each another. Finally, the DynaPro-MS800
estimated the molecular weight according to the existing model of molecular
radius / molecular weight and the distribution of particles in the solution.
Measurement of RS in PBS induced by plasma
When the plasma reacts with the liquid such as deionized water or PBS, RS are
produced but direct monitoring of RS in the liquid is difficult due to the short
half-life and high reactivity. Here, we only measured the concentration of the
long-lived RS such as hydrogen peroxide, nitrate, and ozone in the
plasma-treated liquid (PBS solution) spectrophotometrically on the PhotoLab
6100(WTW, Germany). The test kits were 18789, 09713, and 00607 respectively and
the test methods were according to the WTW company website57.For the LDH protease solutions, the temperature was measured by an infrared
thermometer (Raytek ST20 XB) and regular thermometer. The pH values were
determined using a Basic PH meter (PB-10, Sartorius, Germany). The temperature
and pH of the enzyme solutions were measured simultaneously.
Author Contributions
W.X. and C.C. led the project and supervised all experiments. H.Z., Z.X., J.S., X.L.,
L.D. J.M., Y.L., Q.S. and Z.Z conducted experiments and measurements. W.X., C.C. and
P.C. co-led data analysis and physical interpretations. All authors discussed the
results. H.Z, W.X., C.C. and P.C. co-wrote the manuscript.
Additional Information
How to cite this article: Zhang, H. et al. Effects and Mechanism of
Atmospheric-Pressure Dielectric Barrier Discharge Cold Plasma on Lactate
Dehydrogenase (LDH) Enzyme. Sci. Rep.
5, 10031; doi: 10.1038/srep10031 (2015).
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