Literature DB >> 25986218

Infectious long non-coding RNAs.

Konstantina Katsarou1, A L N Rao2, Mina Tsagris3, Kriton Kalantidis4.   

Abstract

Long non protein coding RNAs (lncRNAs) constitute a large category of the RNA world, able to regulate different biological processes. In this review we are focusing on infectious lncRNAs, their classification, pathogenesis and impact on the infected organisms. Here they are presented in two separate groups: 'dependent lncRNAs' (comprising satellites RNA, Hepatitis D virus and lncRNAs of viral origin) which need a helper virus and 'independent lncRNAs' (viroids) that can self-replicate. Even though these lncRNA do not encode any protein, their structure and/or sequence comprise all the necessary information to drive specific interactions with host factors and regulate several cellular functions. These new data that have emerged during the last few years concerning lncRNAs modify the way we understand molecular biology's 'central dogma' and give new perspectives for applications and potential therapeutic strategies.
Copyright © 2015. Published by Elsevier B.V.

Keywords:  Hepatitis D virus; RNA satellites; Viroids; lncRNA

Mesh:

Substances:

Year:  2015        PMID: 25986218     DOI: 10.1016/j.biochi.2015.05.005

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  11 in total

Review 1.  Role of viruses, prions and miRNA in neurodegenerative disorders and dementia.

Authors:  Sayed Sartaj Sohrab; Mohd Suhail; Ashraf Ali; Mohammad Amjad Kamal; Azamal Husen; Fahim Ahmad; Esam Ibraheem Azhar; Nigel H Greig
Journal:  Virusdisease       Date:  2018-09-29

2.  Potato Spindle Tuber Viroid Modulates Its Replication through a Direct Interaction with a Splicing Regulator.

Authors:  Jian Jiang; Heather N Smith; Di Ren; Shachinthaka D Dissanayaka Mudiyanselage; Angus L Dawe; Lei Wang; Ying Wang
Journal:  J Virol       Date:  2018-09-26       Impact factor: 5.103

3.  Detection of Viroid RNA and vd-siRNA in N. benthamiana Plants: Northern Blot Analyses for Viroid and vd-siRNAs.

Authors:  Konstantina Katsarou; Nikoleta Kryovrysanaki; Kriton Kalantidis
Journal:  Methods Mol Biol       Date:  2022

Review 4.  Long Non-Coding RNAs: Emerging and Versatile Regulators in Host-Virus Interactions.

Authors:  Xing-Yu Meng; Yuzi Luo; Muhammad Naveed Anwar; Yuan Sun; Yao Gao; Huawei Zhang; Muhammad Munir; Hua-Ji Qiu
Journal:  Front Immunol       Date:  2017-11-28       Impact factor: 7.561

5.  Combined Activity of DCL2 and DCL3 Is Crucial in the Defense against Potato Spindle Tuber Viroid.

Authors:  Konstantina Katsarou; Eleni Mavrothalassiti; Wannes Dermauw; Thomas Van Leeuwen; Kriton Kalantidis
Journal:  PLoS Pathog       Date:  2016-10-12       Impact factor: 6.823

Review 6.  Small RNA-Omics for Plant Virus Identification, Virome Reconstruction, and Antiviral Defense Characterization.

Authors:  Mikhail M Pooggin
Journal:  Front Microbiol       Date:  2018-11-20       Impact factor: 5.640

7.  In silico survey of the central conserved regions in viroids of the Pospiviroidae family for conserved asymmetric loop structures.

Authors:  Paul Freidhoff; Michael F Bruist
Journal:  RNA       Date:  2019-05-23       Impact factor: 4.942

8.  Insight on Genes Affecting Tuber Development in Potato upon Potato spindle tuber viroid (PSTVd) Infection.

Authors:  Konstantina Katsarou; Yun Wu; Runxuan Zhang; Nicola Bonar; Jenny Morris; Pete E Hedley; Glenn J Bryan; Kriton Kalantidis; Csaba Hornyik
Journal:  PLoS One       Date:  2016-03-03       Impact factor: 3.240

9.  Functional diversity of long non-coding RNAs in immune regulation.

Authors:  Hua Geng; Xiao-Di Tan
Journal:  Genes Dis       Date:  2016-02-18

10.  Revisiting the Non-Coding Nature of Pospiviroids.

Authors:  Konstantina Katsarou; Charith Raj Adkar-Purushothama; Emilios Tassios; Martina Samiotaki; Christos Andronis; Purificación Lisón; Christoforos Nikolaou; Jean-Pierre Perreault; Kriton Kalantidis
Journal:  Cells       Date:  2022-01-13       Impact factor: 6.600

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