Literature DB >> 25968993

Measurement of the modulation transfer function of an X-ray microscope based on multiple Fourier orders analysis of a Siemens star.

Joaquín Otón, Carlos Oscar S Sorzano, Roberto Marabini, Eva Pereiro, Jose M Carazo.   

Abstract

Soft X-ray tomography (SXT) is becoming a powerful imaging technique to analyze eukaryotic whole cells close to their native state. Central to the analysis of the quality of SXT 3D reconstruction is the estimation of the spatial resolution and Depth of Field of the X-ray microscope. In turn, the characterization of the Modulation Transfer Function (MTF) of the optical system is key to calculate both parameters. Consequently, in this work we introduce a fully automated technique to accurately estimate the transfer function of such an optical system. Our proposal is based on the preprocessing of the experimental images to obtain an estimate of the input pattern, followed by the analysis in Fourier space of multiple orders of a Siemens Star test sample, extending in this way its measured frequency range.

Year:  2015        PMID: 25968993     DOI: 10.1364/OE.23.009567

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  6 in total

1.  Characterization of transfer function, resolution and depth of field of a soft X-ray microscope applied to tomography enhancement by Wiener deconvolution.

Authors:  Joaquín Otón; Eva Pereiro; Ana J Pérez-Berná; Laia Millach; Carlos Oscar S Sorzano; Roberto Marabini; José M Carazo
Journal:  Biomed Opt Express       Date:  2016-11-14       Impact factor: 3.732

2.  PSF correction in soft X-ray tomography.

Authors:  Axel Ekman; Venera Weinhardt; Jian-Hua Chen; Gerry McDermott; Mark A Le Gros; Carolyn Larabell
Journal:  J Struct Biol       Date:  2018-06-13       Impact factor: 2.867

3.  Intracellular nanoparticles mass quantification by near-edge absorption soft X-ray nanotomography.

Authors:  Jose Javier Conesa; Joaquín Otón; Michele Chiappi; Jose María Carazo; Eva Pereiro; Francisco Javier Chichón; José L Carrascosa
Journal:  Sci Rep       Date:  2016-03-10       Impact factor: 4.379

4.  XTEND: Extending the depth of field in cryo soft X-ray tomography.

Authors:  Joaquín Otón; Eva Pereiro; José J Conesa; Francisco J Chichón; Daniel Luque; Javier M Rodríguez; Ana J Pérez-Berná; Carlos Oscar S Sorzano; Joanna Klukowska; Gabor T Herman; Javier Vargas; Roberto Marabini; José L Carrascosa; José M Carazo
Journal:  Sci Rep       Date:  2017-04-04       Impact factor: 4.379

5.  Cryo-soft X-ray tomography: using soft X-rays to explore the ultrastructure of whole cells.

Authors:  Maria Harkiolaki; Michele C Darrow; Matthew C Spink; Ewelina Kosior; Kyle Dent; Elizabeth Duke
Journal:  Emerg Top Life Sci       Date:  2018-04-20

6.  Cryo-soft X-ray tomography as a quantitative three-dimensional tool to model nanoparticle:cell interaction.

Authors:  Michele Chiappi; José Javier Conesa; Eva Pereiro; Carlos Oscar Sánchez Sorzano; María Josefa Rodríguez; Katja Henzler; Gerd Schneider; Francisco Javier Chichón; José L Carrascosa
Journal:  J Nanobiotechnology       Date:  2016-03-03       Impact factor: 10.435

  6 in total

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