Literature DB >> 25968988

Comparative genomics: beyond the horizon of the next research grant.

Frans Schuit1.   

Abstract

With the development of agriculture and food processing techniques, humanity has recently challenged the rules of a billion-year-old experiment called evolution. In this experiment the availability of food in a particular niche has been one of the major driving forces to shape particular species. Comparative genomics is a new research discipline that investigates two or more genomes from different species in order to find specific genetic adaptations that explain a 'workable match' between genetic make-up and environmental constraints such as nutrition. Three recent examples in the literature illustrate how selection of particular genes can contribute to species-specific adaptations that allow them to recognise, secure and digest particular types of food and metabolise its ingredients. There is growing consensus that the recent changes in human diet and physical activity play an active role in the rapid growth of the prevalence of obesity and diabetes. The working hypothesis of the present article is that in the future a more advanced level of comparative genomics of the many natural workable matches of natural species will lead to a much better understanding of the dynamics and regulation of integrated metabolism. It is anticipated that this deeper understanding will lead to novel insights into the mechanism of human diabetes and new strategies for diabetes prevention and treatment. This is one of a series of commentaries under the banner '50 years forward', giving personal opinions on future perspectives in diabetes, to celebrate the 50th anniversary of Diabetologia (1965-2015).

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Year:  2015        PMID: 25968988     DOI: 10.1007/s00125-015-3620-x

Source DB:  PubMed          Journal:  Diabetologia        ISSN: 0012-186X            Impact factor:   10.122


  16 in total

1.  Major taste loss in carnivorous mammals.

Authors:  Peihua Jiang; Jesusa Josue; Xia Li; Dieter Glaser; Weihua Li; Joseph G Brand; Robert F Margolskee; Danielle R Reed; Gary K Beauchamp
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-12       Impact factor: 11.205

2.  Sensory biology. Evolution of sweet taste perception in hummingbirds by transformation of the ancestral umami receptor.

Authors:  Maude W Baldwin; Yasuka Toda; Tomoya Nakagita; Mary J O'Connell; Kirk C Klasing; Takumi Misaka; Scott V Edwards; Stephen D Liberles
Journal:  Science       Date:  2014-08-22       Impact factor: 47.728

3.  The organization of the endocrine pancreas: a hypothetical unifying view of the phylogenetic differences.

Authors:  S Bonner-Weir; G C Weir
Journal:  Gen Comp Endocrinol       Date:  1979-05       Impact factor: 2.822

4.  Evolution of Darwin's finches and their beaks revealed by genome sequencing.

Authors:  Sangeet Lamichhaney; Jonas Berglund; Markus Sällman Almén; Khurram Maqbool; Manfred Grabherr; Alvaro Martinez-Barrio; Marta Promerová; Carl-Johan Rubin; Chao Wang; Neda Zamani; B Rosemary Grant; Peter R Grant; Matthew T Webster; Leif Andersson
Journal:  Nature       Date:  2015-02-11       Impact factor: 49.962

Review 5.  Malaria parasites and red cell variants: when a house is not a home.

Authors:  Steve M Taylor; Rick M Fairhurst
Journal:  Curr Opin Hematol       Date:  2014-05       Impact factor: 3.284

6.  Population genomics reveal recent speciation and rapid evolutionary adaptation in polar bears.

Authors:  Shiping Liu; Eline D Lorenzen; Matteo Fumagalli; Bo Li; Kelley Harris; Zijun Xiong; Long Zhou; Thorfinn Sand Korneliussen; Mehmet Somel; Courtney Babbitt; Greg Wray; Jianwen Li; Weiming He; Zhuo Wang; Wenjing Fu; Xueyan Xiang; Claire C Morgan; Aoife Doherty; Mary J O'Connell; James O McInerney; Erik W Born; Love Dalén; Rune Dietz; Ludovic Orlando; Christian Sonne; Guojie Zhang; Rasmus Nielsen; Eske Willerslev; Jun Wang
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

Review 7.  Applying evolutionary biology to address global challenges.

Authors:  Scott P Carroll; Peter Søgaard Jørgensen; Michael T Kinnison; Carl T Bergstrom; R Ford Denison; Peter Gluckman; Thomas B Smith; Sharon Y Strauss; Bruce E Tabashnik
Journal:  Science       Date:  2014-09-11       Impact factor: 47.728

8.  Adaptive evolution of the insulin two-gene system in mouse.

Authors:  Meng-Shin Shiao; Ben-Yang Liao; Manyuan Long; Hon-Tsen Yu
Journal:  Genetics       Date:  2008-02-01       Impact factor: 4.562

9.  Glucose transporter expression in an avian nectarivore: the ruby-throated hummingbird (Archilochus colubris).

Authors:  Kenneth C Welch; Amina Allalou; Prateek Sehgal; Jason Cheng; Aarthi Ashok
Journal:  PLoS One       Date:  2013-10-14       Impact factor: 3.240

10.  The transcriptional landscape of mouse beta cells compared to human beta cells reveals notable species differences in long non-coding RNA and protein-coding gene expression.

Authors:  Christopher Benner; Talitha van der Meulen; Elena Cacéres; Kristof Tigyi; Cynthia J Donaldson; Mark O Huising
Journal:  BMC Genomics       Date:  2014-07-22       Impact factor: 3.969

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  2 in total

1.  Diabetologia at 50: celebrating half a century of progress in diabetes research and care.

Authors:  Juleen R Zierath
Journal:  Diabetologia       Date:  2015-08       Impact factor: 10.122

2.  Unlocking conserved and diverged metabolic characteristics in cassava carbon assimilation via comparative genomics approach.

Authors:  Wanatsanan Siriwat; Saowalak Kalapanulak; Malinee Suksangpanomrung; Treenut Saithong
Journal:  Sci Rep       Date:  2018-11-09       Impact factor: 4.379

  2 in total

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