Literature DB >> 25956860

The hidden side of unstable DNA repeats: Mutagenesis at a distance.

Kartik A Shah1, Sergei M Mirkin2.   

Abstract

Structure-prone DNA repeats are common components of genomic DNA in all kingdoms of life. In humans, these repeats are linked to genomic instabilities that result in various hereditary disorders, including many cancers. It has long been known that DNA repeats are not only highly polymorphic in length but can also cause chromosomal fragility and stimulate gross chromosomal rearrangements, i.e., deletions, duplications, inversions, translocations and more complex shuffles. More recently, it has become clear that inherently unstable DNA repeats dramatically elevate mutation rates in surrounding DNA segments and that these mutations can occur up to ten kilobases away from the repetitive tract, a phenomenon we call repeat-induced mutagenesis (RIM). This review describes experimental data that led to the discovery and characterization of RIM and discusses the molecular mechanisms that could account for this phenomenon.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Cancer; Chromosomal fragility; Contractions; DNA repeats; Expansions; Hereditary Disease; Mutagenesis; Repair; Replication; Transcription

Mesh:

Substances:

Year:  2015        PMID: 25956860      PMCID: PMC4522329          DOI: 10.1016/j.dnarep.2015.04.020

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  101 in total

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Review 10.  Advances in mechanisms of genetic instability related to hereditary neurological diseases.

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  16 in total

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Review 5.  Role of recombination and replication fork restart in repeat instability.

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7.  Replication stress at microsatellites causes DNA double-strand breaks and break-induced replication.

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8.  Replication Stress Shapes a Protective Chromatin Environment across Fragile Genomic Regions.

Authors:  Jeongkyu Kim; David Sturgill; Robin Sebastian; Simran Khurana; Andy D Tran; Garrett B Edwards; Alex Kruswick; Sandra Burkett; Eri K Hosogane; William W Hannon; Urbain Weyemi; William M Bonner; Karolin Luger; Philipp Oberdoerffer
Journal:  Mol Cell       Date:  2017-12-14       Impact factor: 17.970

9.  Constraints and consequences of the emergence of amino acid repeats in eukaryotic proteins.

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10.  Non-B DNA: a major contributor to small- and large-scale variation in nucleotide substitution frequencies across the genome.

Authors:  Wilfried M Guiblet; Marzia A Cremona; Robert S Harris; Di Chen; Kristin A Eckert; Francesca Chiaromonte; Yi-Fei Huang; Kateryna D Makova
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