Literature DB >> 25955854

Optimal MAP Parameters Estimation in STAPLE Using Local Intensity Similarity Information.

Subrahmanyam Gorthi, Alireza Akhondi-Asl, Simon K Warfield.   

Abstract

In recent years, fusing segmentation results obtained based on multiple template images has become a standard practice in many medical imaging applications. Such multiple-templates-based methods are found to provide more reliable and accurate segmentations than the single-template-based methods. In this paper, we present a new approach for learning prior knowledge about the performance parameters of template images using the local intensity similarity information; we also propose a methodology to incorporate that prior knowledge through the estimation of the optimal MAP parameters. The proposed method is evaluated in the context of segmentation of structures in the brain magnetic resonance images by comparing our results with some of the state-of-the-art segmentation methods. These experiments have clearly demonstrated the advantages of learning and incorporating prior knowledge about the performance parameters using the proposed method.

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Year:  2015        PMID: 25955854      PMCID: PMC4587381          DOI: 10.1109/JBHI.2015.2428279

Source DB:  PubMed          Journal:  IEEE J Biomed Health Inform        ISSN: 2168-2194            Impact factor:   5.772


  15 in total

1.  Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation.

Authors:  Simon K Warfield; Kelly H Zou; William M Wells
Journal:  IEEE Trans Med Imaging       Date:  2004-07       Impact factor: 10.048

2.  Incorporating priors on expert performance parameters for segmentation validation and label fusion: a maximum a posteriori STAPLE.

Authors:  Olivier Commowick; Simon K Warfield
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

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4.  Shape-based averaging.

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5.  Combination strategies in multi-atlas image segmentation: application to brain MR data.

Authors:  Xabier Artaechevarria; Arrate Munoz-Barrutia; Carlos Ortiz-de-Solorzano
Journal:  IEEE Trans Med Imaging       Date:  2009-02-18       Impact factor: 10.048

6.  A logarithmic opinion pool based STAPLE algorithm for the fusion of segmentations with associated reliability weights.

Authors:  Alireza Akhondi-Asl; Lennox Hoyte; Mark E Lockhart; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2014-06-12       Impact factor: 10.048

7.  Characterizing spatially varying performance to improve multi-atlas multi-label segmentation.

Authors:  Andrew J Asman; Bennett A Landman
Journal:  Inf Process Med Imaging       Date:  2011

8.  A generative model for image segmentation based on label fusion.

Authors:  Mert R Sabuncu; B T Thomas Yeo; Koen Van Leemput; Bruce Fischl; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2010-06-17       Impact factor: 10.048

9.  Robust statistical label fusion through COnsensus Level, Labeler Accuracy, and Truth Estimation (COLLATE).

Authors:  Andrew J Asman; Bennett A Landman
Journal:  IEEE Trans Med Imaging       Date:  2011-04-29       Impact factor: 10.048

10.  Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.

Authors:  Arno Klein; Jesper Andersson; Babak A Ardekani; John Ashburner; Brian Avants; Ming-Chang Chiang; Gary E Christensen; D Louis Collins; James Gee; Pierre Hellier; Joo Hyun Song; Mark Jenkinson; Claude Lepage; Daniel Rueckert; Paul Thompson; Tom Vercauteren; Roger P Woods; J John Mann; Ramin V Parsey
Journal:  Neuroimage       Date:  2009-01-13       Impact factor: 6.556

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