Literature DB >> 25954356

Characterizing the sublanguage of online breast cancer forums for medications, symptoms, and emotions.

Noémie Elhadad1, Shaodian Zhang1, Patricia Driscoll1, Samuel Brody2.   

Abstract

Online health communities play an increasingly prevalent role for patients and are the source of a growing body of research. A lexicon that represents the sublanguage of an online community is an important resource to enable analysis and tool development over this data source. This paper investigates a method to generate a lexicon representative of the language of members in a given community with respect to specific semantic types. We experiment with a breast cancer community and detect terms that belong to three semantic types: medications, symptoms and side effects, and emotions. We assess the ability of our automatically generated lexicons to detect new terms, and show that a data-driven approach captures the sublanguage of members in these communities, all the while increasing coverage of general-purpose terminologies. The code and the generated lexicons are made available to the research community.

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Mesh:

Year:  2014        PMID: 25954356      PMCID: PMC4419934     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  19 in total

1.  A hybrid knowledge-based and data-driven approach to identifying semantically similar concepts.

Authors:  Rimma Pivovarov; Noémie Elhadad
Journal:  J Biomed Inform       Date:  2012-01-25       Impact factor: 6.317

Review 2.  Empirical distributional semantics: methods and biomedical applications.

Authors:  Trevor Cohen; Dominic Widdows
Journal:  J Biomed Inform       Date:  2009-02-14       Impact factor: 6.317

3.  Mapping cancer patients' symptoms to UMLS concepts.

Authors:  Laura Slaughter; Cornelia Ruland; Ann Kristin Rotegård
Journal:  AMIA Annu Symp Proc       Date:  2005

4.  Quantifying incoherence in speech: an automated methodology and novel application to schizophrenia.

Authors:  Brita Elvevåg; Peter W Foltz; Daniel R Weinberger; Terry E Goldberg
Journal:  Schizophr Res       Date:  2007-04-16       Impact factor: 4.939

5.  Threading together patient expertise.

Authors:  Andrea Civan; Wanda Pratt
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

6.  Term identification methods for consumer health vocabulary development.

Authors:  Qing T Zeng; Tony Tse; Guy Divita; Alla Keselman; Jon Crowell; Allen C Browne; Sergey Goryachev; Long Ngo
Journal:  J Med Internet Res       Date:  2007-02-28       Impact factor: 5.428

7.  Semantically linking and browsing PubMed abstracts with gene ontology.

Authors:  Bhanu C Vanteru; Jahangheer S Shaik; Mohammed Yeasin
Journal:  BMC Genomics       Date:  2008       Impact factor: 3.969

8.  A side effect resource to capture phenotypic effects of drugs.

Authors:  Michael Kuhn; Monica Campillos; Ivica Letunic; Lars Juhl Jensen; Peer Bork
Journal:  Mol Syst Biol       Date:  2010-01-19       Impact factor: 11.429

9.  Using empirically constructed lexical resources for named entity recognition.

Authors:  Siddhartha Jonnalagadda; Trevor Cohen; Stephen Wu; Hongfang Liu; Graciela Gonzalez
Journal:  Biomed Inform Insights       Date:  2013-06-24

10.  Identifying medical terms in patient-authored text: a crowdsourcing-based approach.

Authors:  Diana Lynn MacLean; Jeffrey Heer
Journal:  J Am Med Inform Assoc       Date:  2013-05-05       Impact factor: 4.497

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  12 in total

1.  Leveraging cues from person-generated health data for peer matching in online communities.

Authors:  Andrea L Hartzler; Megan N Taylor; Albert Park; Troy Griffiths; Uba Backonja; David W McDonald; Sam Wahbeh; Cory Brown; Wanda Pratt
Journal:  J Am Med Inform Assoc       Date:  2016-02-05       Impact factor: 4.497

2.  Does sustained participation in an online health community affect sentiment?

Authors:  Shaodian Zhang; Erin Bantum; Jason Owen; Noémie Elhadad
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

3.  Characterization of Temporal Semantic Shifts of Peer-to-Peer Communication in a Health-Related Online Community: Implications for Data-driven Health Promotion.

Authors:  Vishnupriya Sridharan; Trevor Cohen; Nathan Cobb; Sahiti Myneni
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

4.  Content-specific network analysis of peer-to-peer communication in an online community for smoking cessation.

Authors:  Sahiti Myneni; Nathan K Cobb; Trevor Cohen
Journal:  AMIA Annu Symp Proc       Date:  2017-02-10

Review 5.  Aspiring to Unintended Consequences of Natural Language Processing: A Review of Recent Developments in Clinical and Consumer-Generated Text Processing.

Authors:  D Demner-Fushman; N Elhadad
Journal:  Yearb Med Inform       Date:  2016-11-10

6.  Speculation detection for Chinese clinical notes: Impacts of word segmentation and embedding models.

Authors:  Shaodian Zhang; Tian Kang; Xingting Zhang; Dong Wen; Noémie Elhadad; Jianbo Lei
Journal:  J Biomed Inform       Date:  2016-02-26       Impact factor: 6.317

7.  Longitudinal analysis of discussion topics in an online breast cancer community using convolutional neural networks.

Authors:  Shaodian Zhang; Edouard Grave; Elizabeth Sklar; Noémie Elhadad
Journal:  J Biomed Inform       Date:  2017-03-18       Impact factor: 6.317

8.  Automatically Detecting Failures in Natural Language Processing Tools for Online Community Text.

Authors:  Albert Park; Andrea L Hartzler; Jina Huh; David W McDonald; Wanda Pratt
Journal:  J Med Internet Res       Date:  2015-08-31       Impact factor: 5.428

9.  Online cancer communities as informatics intervention for social support: conceptualization, characterization, and impact.

Authors:  Shaodian Zhang; Erin O'Carroll Bantum; Jason Owen; Suzanne Bakken; Noémie Elhadad
Journal:  J Am Med Inform Assoc       Date:  2017-03-01       Impact factor: 4.497

10.  "We make choices we think are going to save us": Debate and stance identification for online breast cancer CAM discussions.

Authors:  Shaodian Zhang; Lin Qiu; Frank Chen; Weinan Zhang; Yong Yu; Noémie Elhadad
Journal:  Proc Int World Wide Web Conf       Date:  2017-04
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