Literature DB >> 25937823

Tensor-based Multi-view Feature Selection with Applications to Brain Diseases.

Bokai Cao1, Lifang He2, Xiangnan Kong3, Philip S Yu1, Zhifeng Hao4, Ann B Ragin5.   

Abstract

In the era of big data, we can easily access information from multiple views which may be obtained from different sources or feature subsets. Generally, different views provide complementary information for learning tasks. Thus, multi-view learning can facilitate the learning process and is prevalent in a wide range of application domains. For example, in medical science, measurements from a series of medical examinations are documented for each subject, including clinical, imaging, immunologic, serologic and cognitive measures which are obtained from multiple sources. Specifically, for brain diagnosis, we can have different quantitative analysis which can be seen as different feature subsets of a subject. It is desirable to combine all these features in an effective way for disease diagnosis. However, some measurements from less relevant medical examinations can introduce irrelevant information which can even be exaggerated after view combinations. Feature selection should therefore be incorporated in the process of multi-view learning. In this paper, we explore tensor product to bring different views together in a joint space, and present a dual method of tensor-based multi-view feature selection (dual-Tmfs) based on the idea of support vector machine recursive feature elimination. Experiments conducted on datasets derived from neurological disorder demonstrate the features selected by our proposed method yield better classification performance and are relevant to disease diagnosis.

Entities:  

Keywords:  brain diseases; feature selection; multi-view learning; tensor

Year:  2014        PMID: 25937823      PMCID: PMC4415282          DOI: 10.1109/ICDM.2014.26

Source DB:  PubMed          Journal:  Proc IEEE Int Conf Data Min        ISSN: 1550-4786


  10 in total

1.  Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy.

Authors:  Hanchuan Peng; Fuhui Long; Chris Ding
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2005-08       Impact factor: 6.226

2.  Discriminative Feature Selection for Uncertain Graph Classification.

Authors:  Xiangnan Kong; Philip S Yu; Xue Wang; Ann B Ragin
Journal:  Proc SIAM Int Conf Data Min       Date:  2013

3.  Feature Selection in the Tensor Product Feature Space.

Authors:  Aaron Smalter; Jun Huan; Gerald Lushington
Journal:  Proc IEEE Int Conf Data Min       Date:  2009

4.  DuSK: A Dual Structure-preserving Kernel for Supervised Tensor Learning with Applications to Neuroimages.

Authors:  Lifang He; Xiangnan Kong; Philip S Yu; Ann B Ragin; Zhifeng Hao; Xiaowei Yang
Journal:  Proc SIAM Int Conf Data Min       Date:  2014

5.  Validity of the Karnofsky Performance Status in an HIV-infected sample.

Authors:  M W O'Dell; D P Lubeck; P O'Driscoll; S Matsuno
Journal:  J Acquir Immune Defic Syndr Hum Retrovirol       Date:  1995-11-01

Review 6.  Biomarkers of HIV-1 CNS infection and injury.

Authors:  R W Price; L G Epstein; J T Becker; P Cinque; M Gisslen; L Pulliam; J C McArthur
Journal:  Neurology       Date:  2007-10-30       Impact factor: 9.910

7.  Neuronal damage in the cerebral cortex of AIDS brains: a morphometric study.

Authors:  S Weis; H Haug; H Budka
Journal:  Acta Neuropathol       Date:  1993       Impact factor: 17.088

8.  Magnetic resonance imaging measurement of gray matter volume reductions in HIV dementia.

Authors:  E H Aylward; P D Brettschneider; J C McArthur; G J Harris; T E Schlaepfer; J D Henderer; P E Barta; A Y Tien; G D Pearlson
Journal:  Am J Psychiatry       Date:  1995-07       Impact factor: 18.112

9.  Structural brain alterations can be detected early in HIV infection.

Authors:  Ann B Ragin; Hongyan Du; Renee Ochs; Ying Wu; Christina L Sammet; Alfred Shoukry; Leon G Epstein
Journal:  Neurology       Date:  2012-11-28       Impact factor: 9.910

10.  CD4+ T cell depletion during all stages of HIV disease occurs predominantly in the gastrointestinal tract.

Authors:  Jason M Brenchley; Timothy W Schacker; Laura E Ruff; David A Price; Jodie H Taylor; Gregory J Beilman; Phuong L Nguyen; Alexander Khoruts; Matthew Larson; Ashley T Haase; Daniel C Douek
Journal:  J Exp Med       Date:  2004-09-13       Impact factor: 14.307

  10 in total
  5 in total

Review 1.  A review of heterogeneous data mining for brain disorder identification.

Authors:  Bokai Cao; Xiangnan Kong; Philip S Yu
Journal:  Brain Inform       Date:  2015-09-30

2.  Identifying HIV-induced subgraph patterns in brain networks with side information.

Authors:  Bokai Cao; Xiangnan Kong; Jingyuan Zhang; Philip S Yu; Ann B Ragin
Journal:  Brain Inform       Date:  2015-11-16

3.  Rigorous optimisation of multilinear discriminant analysis with Tucker and PARAFAC structures.

Authors:  Laura Frølich; Tobias Søren Andersen; Morten Mørup
Journal:  BMC Bioinformatics       Date:  2018-05-30       Impact factor: 3.169

4.  Computer-Aided Multi-Target Management of Emergent Alzheimer's Disease.

Authors:  Hyunjo Kim; Hyunwook Han
Journal:  Bioinformation       Date:  2018-05-05

5.  Determinants of HIV-induced brain changes in three different periods of the early clinical course: A data mining analysis.

Authors:  Bokai Cao; Xiangnan Kong; Casey Kettering; Philip Yu; Ann Ragin
Journal:  Neuroimage Clin       Date:  2015-08-01       Impact factor: 4.881

  5 in total

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