Literature DB >> 25936628

Statistical structure of neural spiking under non-Poissonian or other non-white stimulation.

Tilo Schwalger1, Felix Droste, Benjamin Lindner.   

Abstract

Nerve cells in the brain generate sequences of action potentials with a complex statistics. Theoretical attempts to understand this statistics were largely limited to the case of a temporally uncorrelated input (Poissonian shot noise) from the neurons in the surrounding network. However, the stimulation from thousands of other neurons has various sorts of temporal structure. Firstly, input spike trains are temporally correlated because their firing rates can carry complex signals and because of cell-intrinsic properties like neural refractoriness, bursting, or adaptation. Secondly, at the connections between neurons, the synapses, usage-dependent changes in the synaptic weight (short-term plasticity) further shape the correlation structure of the effective input to the cell. From the theoretical side, it is poorly understood how these correlated stimuli, so-called colored noise, affect the spike train statistics. In particular, no standard method exists to solve the associated first-passage-time problem for the interspike-interval statistics with an arbitrarily colored noise. Assuming that input fluctuations are weaker than the mean neuronal drive, we derive simple formulas for the essential interspike-interval statistics for a canonical model of a tonically firing neuron subjected to arbitrarily correlated input from the network. We verify our theory by numerical simulations for three paradigmatic situations that lead to input correlations: (i) rate-coded naturalistic stimuli in presynaptic spike trains; (ii) presynaptic refractoriness or bursting; (iii) synaptic short-term plasticity. In all cases, we find severe effects on interval statistics. Our results provide a framework for the interpretation of firing statistics measured in vivo in the brain.

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Year:  2015        PMID: 25936628     DOI: 10.1007/s10827-015-0560-x

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  49 in total

1.  Effects of synaptic noise and filtering on the frequency response of spiking neurons.

Authors:  N Brunel; F S Chance; N Fourcaud; L F Abbott
Journal:  Phys Rev Lett       Date:  2001-03-05       Impact factor: 9.161

2.  Spike-frequency adaptation of a generalized leaky integrate-and-fire model neuron.

Authors:  Y H Liu; X J Wang
Journal:  J Comput Neurosci       Date:  2001 Jan-Feb       Impact factor: 1.621

3.  Role of synaptic filtering on the firing response of simple model neurons.

Authors:  Rubén Moreno-Bote; Néstor Parga
Journal:  Phys Rev Lett       Date:  2004-01-15       Impact factor: 9.161

Review 4.  The high-conductance state of neocortical neurons in vivo.

Authors:  Alain Destexhe; Michael Rudolph; Denis Paré
Journal:  Nat Rev Neurosci       Date:  2003-09       Impact factor: 34.870

5.  RANDOM WALK MODELS FOR THE SPIKE ACTIVITY OF A SINGLE NEURON.

Authors:  G L GERSTEIN; B MANDELBROT
Journal:  Biophys J       Date:  1964-01       Impact factor: 4.033

6.  Interspike interval statistics of neurons driven by colored noise.

Authors:  Benjamin Lindner
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-02-27

7.  Interspike interval statistics of a leaky integrate-and-fire neuron driven by Gaussian noise with large correlation times.

Authors:  Tilo Schwalger; Lutz Schimansky-Geier
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2008-03-14

8.  Firing frequency of leaky intergrate-and-fire neurons with synaptic current dynamics.

Authors:  N Brunel; S Sergi
Journal:  J Theor Biol       Date:  1998-11-07       Impact factor: 2.691

9.  Neuron dynamics in the presence of 1/f noise.

Authors:  Cameron Sobie; Arif Babul; Rogério de Sousa
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-05-12

10.  Power spectrum analysis of bursting cells in area MT in the behaving monkey.

Authors:  W Bair; C Koch; W Newsome; K Britten
Journal:  J Neurosci       Date:  1994-05       Impact factor: 6.167

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  16 in total

1.  Balanced ionotropic receptor dynamics support signal estimation via voltage-dependent membrane noise.

Authors:  Curtis M Marcoux; Stephen E Clarke; William H Nesse; Andre Longtin; Leonard Maler
Journal:  J Neurophysiol       Date:  2015-11-11       Impact factor: 2.714

2.  Exact analytical results for integrate-and-fire neurons driven by excitatory shot noise.

Authors:  Felix Droste; Benjamin Lindner
Journal:  J Comput Neurosci       Date:  2017-06-06       Impact factor: 1.621

3.  Towards a theory of cortical columns: From spiking neurons to interacting neural populations of finite size.

Authors:  Tilo Schwalger; Moritz Deger; Wulfram Gerstner
Journal:  PLoS Comput Biol       Date:  2017-04-19       Impact factor: 4.475

4.  An integrate-and-fire model to generate spike trains with long-range dependence.

Authors:  Alexandre Richard; Patricio Orio; Etienne Tanré
Journal:  J Comput Neurosci       Date:  2018-03-24       Impact factor: 1.621

5.  Low-dimensional spike rate models derived from networks of adaptive integrate-and-fire neurons: Comparison and implementation.

Authors:  Moritz Augustin; Josef Ladenbauer; Fabian Baumann; Klaus Obermayer
Journal:  PLoS Comput Biol       Date:  2017-06-23       Impact factor: 4.475

6.  The steady state and response to a periodic stimulation of the firing rate for a theta neuron with correlated noise.

Authors:  Jannik Franzen; Lukas Ramlow; Benjamin Lindner
Journal:  J Comput Neurosci       Date:  2022-10-22       Impact factor: 1.453

Review 7.  From the statistics of connectivity to the statistics of spike times in neuronal networks.

Authors:  Gabriel Koch Ocker; Yu Hu; Michael A Buice; Brent Doiron; Krešimir Josić; Robert Rosenbaum; Eric Shea-Brown
Journal:  Curr Opin Neurobiol       Date:  2017-08-30       Impact factor: 6.627

8.  Striatal network modeling in Huntington's Disease.

Authors:  Adam Ponzi; Scott J Barton; Kendra D Bunner; Claudia Rangel-Barajas; Emily S Zhang; Benjamin R Miller; George V Rebec; James Kozloski
Journal:  PLoS Comput Biol       Date:  2020-04-17       Impact factor: 4.475

9.  A Diffusion Approximation and Numerical Methods for Adaptive Neuron Models with Stochastic Inputs.

Authors:  Robert Rosenbaum
Journal:  Front Comput Neurosci       Date:  2016-04-22       Impact factor: 2.380

10.  Self-Consistent Scheme for Spike-Train Power Spectra in Heterogeneous Sparse Networks.

Authors:  Rodrigo F O Pena; Sebastian Vellmer; Davide Bernardi; Antonio C Roque; Benjamin Lindner
Journal:  Front Comput Neurosci       Date:  2018-03-02       Impact factor: 2.380

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