Literature DB >> 28422957

Towards a theory of cortical columns: From spiking neurons to interacting neural populations of finite size.

Tilo Schwalger1, Moritz Deger1,2, Wulfram Gerstner1.   

Abstract

Neural population equations such as neural mass or field models are widely used to study brain activity on a large scale. However, the relation of these models to the properties of single neurons is unclear. Here we derive an equation for several interacting populations at the mesoscopic scale starting from a microscopic model of randomly connected generalized integrate-and-fire neuron models. Each population consists of 50-2000 neurons of the same type but different populations account for different neuron types. The stochastic population equations that we find reveal how spike-history effects in single-neuron dynamics such as refractoriness and adaptation interact with finite-size fluctuations on the population level. Efficient integration of the stochastic mesoscopic equations reproduces the statistical behavior of the population activities obtained from microscopic simulations of a full spiking neural network model. The theory describes nonlinear emergent dynamics such as finite-size-induced stochastic transitions in multistable networks and synchronization in balanced networks of excitatory and inhibitory neurons. The mesoscopic equations are employed to rapidly integrate a model of a cortical microcircuit consisting of eight neuron types, which allows us to predict spontaneous population activities as well as evoked responses to thalamic input. Our theory establishes a general framework for modeling finite-size neural population dynamics based on single cell and synapse parameters and offers an efficient approach to analyzing cortical circuits and computations.

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Year:  2017        PMID: 28422957      PMCID: PMC5415267          DOI: 10.1371/journal.pcbi.1005507

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  112 in total

1.  Population dynamics of spiking neurons: fast transients, asynchronous states, and locking.

Authors:  W Gerstner
Journal:  Neural Comput       Date:  2000-01       Impact factor: 2.026

2.  Neurodynamics of biased competition and cooperation for attention: a model with spiking neurons.

Authors:  Gustavo Deco; Edmund T Rolls
Journal:  J Neurophysiol       Date:  2005-02-09       Impact factor: 2.714

3.  Stimulus dependence of local field potential spectra: experiment versus theory.

Authors:  Francesca Barbieri; Alberto Mazzoni; Nikos K Logothetis; Stefano Panzeri; Nicolas Brunel
Journal:  J Neurosci       Date:  2014-10-29       Impact factor: 6.167

4.  A feedforward inhibitory circuit mediates lateral refinement of sensory representation in upper layer 2/3 of mouse primary auditory cortex.

Authors:  Ling-yun Li; Xu-ying Ji; Feixue Liang; Ya-tang Li; Zhongju Xiao; Huizhong W Tao; Li I Zhang
Journal:  J Neurosci       Date:  2014-10-08       Impact factor: 6.167

5.  How local excitation-inhibition ratio impacts the whole brain dynamics.

Authors:  Gustavo Deco; Adrián Ponce-Alvarez; Patric Hagmann; Gian Luca Romani; Dante Mantini; Maurizio Corbetta
Journal:  J Neurosci       Date:  2014-06-04       Impact factor: 6.167

6.  The cell-type specific cortical microcircuit: relating structure and activity in a full-scale spiking network model.

Authors:  Tobias C Potjans; Markus Diesmann
Journal:  Cereb Cortex       Date:  2012-12-02       Impact factor: 5.357

7.  Cooperative Subnetworks of Molecularly Similar Interneurons in Mouse Neocortex.

Authors:  Mahesh M Karnani; Jesse Jackson; Inbal Ayzenshtat; Jason Tucciarone; Kasra Manoocheri; William G Snider; Rafael Yuste
Journal:  Neuron       Date:  2016-03-24       Impact factor: 17.173

8.  Mean-field description and propagation of chaos in networks of Hodgkin-Huxley and FitzHugh-Nagumo neurons.

Authors:  Javier Baladron; Diego Fasoli; Olivier Faugeras; Jonathan Touboul
Journal:  J Math Neurosci       Date:  2012-05-31       Impact factor: 1.300

9.  Automated High-Throughput Characterization of Single Neurons by Means of Simplified Spiking Models.

Authors:  Christian Pozzorini; Skander Mensi; Olivier Hagens; Richard Naud; Christof Koch; Wulfram Gerstner
Journal:  PLoS Comput Biol       Date:  2015-06-17       Impact factor: 4.475

10.  A Markov model for the temporal dynamics of balanced random networks of finite size.

Authors:  Fereshteh Lagzi; Stefan Rotter
Journal:  Front Comput Neurosci       Date:  2014-12-03       Impact factor: 2.380

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  36 in total

1.  A gradient flow formulation for the stochastic Amari neural field model.

Authors:  Christian Kuehn; Jonas M Tölle
Journal:  J Math Biol       Date:  2019-06-18       Impact factor: 2.259

Review 2.  From point process observations to collective neural dynamics: Nonlinear Hawkes process GLMs, low-dimensional dynamics and coarse graining.

Authors:  Wilson Truccolo
Journal:  J Physiol Paris       Date:  2017-05-25

3.  Low-dimensional spike rate models derived from networks of adaptive integrate-and-fire neurons: Comparison and implementation.

Authors:  Moritz Augustin; Josef Ladenbauer; Fabian Baumann; Klaus Obermayer
Journal:  PLoS Comput Biol       Date:  2017-06-23       Impact factor: 4.475

4.  NetPyNE Implementation and Scaling of the Potjans-Diesmann Cortical Microcircuit Model.

Authors:  Cecilia Romaro; Fernando Araujo Najman; William W Lytton; Antonio C Roque; Salvador Dura-Bernal
Journal:  Neural Comput       Date:  2021-06-11       Impact factor: 2.026

5.  Brain signal predictions from multi-scale networks using a linearized framework.

Authors:  Espen Hagen; Steinn H Magnusson; Torbjørn V Ness; Geir Halnes; Pooja N Babu; Charl Linssen; Abigail Morrison; Gaute T Einevoll
Journal:  PLoS Comput Biol       Date:  2022-08-12       Impact factor: 4.779

6.  Synchronization, Stochasticity, and Phase Waves in Neuronal Networks With Spatially-Structured Connectivity.

Authors:  Anirudh Kulkarni; Jonas Ranft; Vincent Hakim
Journal:  Front Comput Neurosci       Date:  2020-10-19       Impact factor: 2.380

7.  Generation of Sharp Wave-Ripple Events by Disinhibition.

Authors:  Roberta Evangelista; Gaspar Cano; Claire Cooper; Dietmar Schmitz; Nikolaus Maier; Richard Kempter
Journal:  J Neurosci       Date:  2020-09-10       Impact factor: 6.167

8.  Stability of stochastic finite-size spiking-neuron networks: Comparing mean-field, 1-loop correction and quasi-renewal approximations.

Authors:  Dmitrii Todorov; Wilson Truccolo
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2019-07

Review 9.  Biological constraints on neural network models of cognitive function.

Authors:  Friedemann Pulvermüller; Rosario Tomasello; Malte R Henningsen-Schomers; Thomas Wennekers
Journal:  Nat Rev Neurosci       Date:  2021-06-28       Impact factor: 34.870

10.  A stochastic-field description of finite-size spiking neural networks.

Authors:  Grégory Dumont; Alexandre Payeur; André Longtin
Journal:  PLoS Comput Biol       Date:  2017-08-07       Impact factor: 4.475

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