Literature DB >> 25934393

A Conserved Residue Cluster That Governs Kinetics of ATP-dependent Gating of Kir6.2 Potassium Channels.

Roger S Zhang1, Jordan D Wright1, Stephan A Pless2, John-Jose Nunez1, Robin Y Kim1, Jenny B W Li1, Runying Yang1, Christopher A Ahern3, Harley T Kurata4.   

Abstract

ATP-sensitive potassium (KATP) channels are heteromultimeric complexes of an inwardly rectifying Kir channel (Kir6.x) and sulfonylurea receptors. Their regulation by intracellular ATP and ADP generates electrical signals in response to changes in cellular metabolism. We investigated channel elements that control the kinetics of ATP-dependent regulation of KATP (Kir6.2 + SUR1) channels using rapid concentration jumps. WT Kir6.2 channels re-open after rapid washout of ATP with a time constant of ∼60 ms. Extending similar kinetic measurements to numerous mutants revealed fairly modest effects on gating kinetics despite significant changes in ATP sensitivity and open probability. However, we identified a pair of highly conserved neighboring amino acids (Trp-68 and Lys-170) that control the rate of channel opening and inhibition in response to ATP. Paradoxically, mutations of Trp-68 or Lys-170 markedly slow the kinetics of channel opening (500 and 700 ms for W68L and K170N, respectively), while increasing channel open probability. Examining the functional effects of these residues using φ value analysis revealed a steep negative slope. This finding implies that these residues play a role in lowering the transition state energy barrier between open and closed channel states. Using unnatural amino acid incorporation, we demonstrate the requirement for a planar amino acid at Kir6.2 position 68 for normal channel gating, which is potentially necessary to localize the ϵ-amine of Lys-170 in the phosphatidylinositol 4,5-bisphosphate-binding site. Overall, our findings identify a discrete pair of highly conserved residues with an essential role for controlling gating kinetics of Kir channels.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  KATP channel; PIP2; diabetes; gating; ion channel; kinetics; ligand-dependent gating; potassium channel

Mesh:

Substances:

Year:  2015        PMID: 25934393      PMCID: PMC4505460          DOI: 10.1074/jbc.M114.631960

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  53 in total

1.  Functional analysis of a structural model of the ATP-binding site of the KATP channel Kir6.2 subunit.

Authors:  Jennifer F Antcliff; Shozeb Haider; Peter Proks; Mark S P Sansom; Frances M Ashcroft
Journal:  EMBO J       Date:  2005-01-13       Impact factor: 11.598

Review 2.  KATP channels as molecular sensors of cellular metabolism.

Authors:  Colin G Nichols
Journal:  Nature       Date:  2006-03-23       Impact factor: 49.962

3.  Cation-pi interactions in structural biology.

Authors:  J P Gallivan; D A Dougherty
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

4.  Octameric stoichiometry of the KATP channel complex.

Authors:  S Shyng; C G Nichols
Journal:  J Gen Physiol       Date:  1997-12       Impact factor: 4.086

5.  KCNJ11 activating mutations in Italian patients with permanent neonatal diabetes.

Authors:  Ornella Massa; Dario Iafusco; Elena D'Amato; Anna L Gloyn; Andrew T Hattersley; Bruno Pasquino; Giorgio Tonini; Francesco Dammacco; Giorgio Zanette; Franco Meschi; Ottavia Porzio; Gianfranco Bottazzo; Antonino Crinó; Renata Lorini; Franco Cerutti; Maurizio Vanelli; Fabrizio Barbetti
Journal:  Hum Mutat       Date:  2005-01       Impact factor: 4.878

6.  Molecular analysis of ATP-sensitive K channel gating and implications for channel inhibition by ATP.

Authors:  S Trapp; P Proks; S J Tucker; F M Ashcroft
Journal:  J Gen Physiol       Date:  1998-09       Impact factor: 4.086

7.  PIP2 and PIP as determinants for ATP inhibition of KATP channels.

Authors:  T Baukrowitz; U Schulte; D Oliver; S Herlitze; T Krauter; S J Tucker; J P Ruppersberg; B Fakler
Journal:  Science       Date:  1998-11-06       Impact factor: 47.728

8.  Membrane phospholipid control of nucleotide sensitivity of KATP channels.

Authors:  S L Shyng; C G Nichols
Journal:  Science       Date:  1998-11-06       Impact factor: 47.728

9.  Biophysics and structure of the patch and the gigaseal.

Authors:  Thomas M Suchyna; Vladislav S Markin; Frederick Sachs
Journal:  Biophys J       Date:  2009-08-05       Impact factor: 4.033

Review 10.  Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp.

Authors:  D A Dougherty
Journal:  Science       Date:  1996-01-12       Impact factor: 47.728

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2.  Computational Identification of Novel Kir6 Channel Inhibitors.

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4.  Rational incorporation of any unnatural amino acid into proteins by machine learning on existing experimental proofs.

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5.  Atomic mutagenesis in ion channels with engineered stoichiometry.

Authors:  John D Lueck; Adam L Mackey; Daniel T Infield; Jason D Galpin; Jing Li; Benoît Roux; Christopher A Ahern
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6.  Pore- and voltage sensor-targeted KCNQ openers have distinct state-dependent actions.

Authors:  Caroline K Wang; Shawn M Lamothe; Alice W Wang; Runying Y Yang; Harley T Kurata
Journal:  J Gen Physiol       Date:  2018-10-29       Impact factor: 4.086

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