Literature DB >> 25919426

Automated frame selection process for high-resolution microendoscopy.

Ayumu Ishijima1, Richard A Schwarz2, Dongsuk Shin2, Sharon Mondrik2, Nadarajah Vigneswaran3, Ann M Gillenwater4, Sharmila Anandasabapathy5, Rebecca Richards-Kortum2.   

Abstract

We developed an automated frame selection algorithm for high-resolution microendoscopy video sequences. The algorithm rapidly selects a representative frame with minimal motion artifact from a short video sequence, enabling fully automated image analysis at the point-of-care. The algorithm was evaluated by quantitative comparison of diagnostically relevant image features and diagnostic classification results obtained using automated frame selection versus manual frame selection. A data set consisting of video sequences collected in vivo from 100 oral sites and 167 esophageal sites was used in the analysis. The area under the receiver operating characteristic curve was 0.78 (automated selection) versus 0.82 (manual selection) for oral sites, and 0.93 (automated selection) versus 0.92 (manual selection) for esophageal sites. The implementation of fully automated high-resolution microendoscopy at the point-of-care has the potential to reduce the number of biopsies needed for accurate diagnosis of precancer and cancer in low-resource settings where there may be limited infrastructure and personnel for standard histologic analysis.

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Year:  2015        PMID: 25919426      PMCID: PMC4412137          DOI: 10.1117/1.JBO.20.4.046014

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  18 in total

1.  A colon video analysis framework for polyp detection.

Authors:  Sun Young Park; Dustin Sargent; Inbar Spofford; Kirby G Vosburgh; Yousif A-Rahim
Journal:  IEEE Trans Biomed Eng       Date:  2012-02-21       Impact factor: 4.538

2.  Comparison of autofocus methods for automated microscopy.

Authors:  L Firestone; K Cook; K Culp; N Talsania; K Preston
Journal:  Cytometry       Date:  1991

3.  Information entropy measure for evaluation of image quality.

Authors:  Du-Yih Tsai; Yongbum Lee; Eri Matsuyama
Journal:  J Digit Imaging       Date:  2008-09       Impact factor: 4.056

4.  Computer-aided identification of ovarian cancer in confocal microendoscope images.

Authors:  Saurabh Srivastava; Jeffrey J Rodríguez; Andrew R Rouse; Molly A Brewer; Arthur F Gmitro
Journal:  J Biomed Opt       Date:  2008 Mar-Apr       Impact factor: 3.170

5.  Super-image mosaic of infant retinal fundus: selection and registration of the best-quality frames from videos.

Authors:  Enea Poletti; Giulio Benedetti; Alfredo Ruggeri
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2013

6.  High-resolution imaging in Barrett's esophagus: a novel, low-cost endoscopic microscope.

Authors:  Timothy J Muldoon; Sharmila Anandasabapathy; Dipen Maru; Rebecca Richards-Kortum
Journal:  Gastrointest Endosc       Date:  2008-10       Impact factor: 9.427

7.  Subcellular-resolution molecular imaging within living tissue by fiber microendoscopy.

Authors:  Timothy J Muldoon; Mark C Pierce; Dawn L Nida; Michelle D Williams; Ann Gillenwater; Rebecca Richards-Kortum
Journal:  Opt Express       Date:  2007-12-10       Impact factor: 3.894

8.  Noninvasive imaging of oral neoplasia with a high-resolution fiber-optic microendoscope.

Authors:  Timothy J Muldoon; Darren Roblyer; Michelle D Williams; Vanda M T Stepanek; Rebecca Richards-Kortum; Ann M Gillenwater
Journal:  Head Neck       Date:  2011-03-16       Impact factor: 3.147

9.  High-resolution fiber-optic microendoscopy for in situ cellular imaging.

Authors:  Mark Pierce; Dihua Yu; Rebecca Richards-Kortum
Journal:  J Vis Exp       Date:  2011-01-11       Impact factor: 1.355

10.  Automatic small bowel tumor diagnosis by using multi-scale wavelet-based analysis in wireless capsule endoscopy images.

Authors:  Daniel C Barbosa; Dalila B Roupar; Jaime C Ramos; Adriano C Tavares; Carlos S Lima
Journal:  Biomed Eng Online       Date:  2012-01-11       Impact factor: 2.819

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  10 in total

1.  Differential structured illumination microendoscopy for in vivo imaging of molecular contrast agents.

Authors:  Pelham Keahey; Preetha Ramalingam; Kathleen Schmeler; Rebecca R Richards-Kortum
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-12       Impact factor: 11.205

2.  The Role of Affordable, Point-of-Care Technologies for Cancer Care in Low- and Middle-Income Countries: A Review and Commentary.

Authors:  Karen Haney; Pushpa Tandon; Rao Divi; Miguel R Ossandon; Houston Baker; Paul C Pearlman
Journal:  IEEE J Transl Eng Health Med       Date:  2017-11-23       Impact factor: 3.316

Review 3.  Screening for esophageal squamous cell carcinoma: recent advances.

Authors:  Don C Codipilly; Yi Qin; Sanford M Dawsey; John Kisiel; Mark Topazian; David Ahlquist; Prasad G Iyer
Journal:  Gastrointest Endosc       Date:  2018-04-27       Impact factor: 9.427

4.  In Vivo Multimodal Optical Imaging: Improved Detection of Oral Dysplasia in Low-Risk Oral Mucosal Lesions.

Authors:  Eric C Yang; Richard A Schwarz; Alexander K Lang; Nancy Bass; Hawraa Badaoui; Imran S Vohra; Katelin D Cherry; Michelle D Williams; Ann M Gillenwater; Nadarajah Vigneswaran; Rebecca R Richards-Kortum
Journal:  Cancer Prev Res (Phila)       Date:  2018-06-14

5.  Prospective Evaluation of Multimodal Optical Imaging with Automated Image Analysis to Detect Oral Neoplasia In Vivo.

Authors:  Timothy Quang; Emily Q Tran; Richard A Schwarz; Michelle D Williams; Nadarajah Vigneswaran; Ann M Gillenwater; Rebecca Richards-Kortum
Journal:  Cancer Prev Res (Phila)       Date:  2017-08-01

6.  Automated software-assisted diagnosis of esophageal squamous cell neoplasia using high-resolution microendoscopy.

Authors:  Mimi C Tan; Sheena Bhushan; Timothy Quang; Richard Schwarz; Kalpesh H Patel; Xinying Yu; Zhengqi Li; Guiqi Wang; Fan Zhang; Xueshan Wang; Hong Xu; Rebecca R Richards-Kortum; Sharmila Anandasabapathy
Journal:  Gastrointest Endosc       Date:  2020-07-16       Impact factor: 9.427

7.  Quantitative analysis of in vivo high-resolution microendoscopic images for the detection of neoplastic colorectal polyps.

Authors:  Yubo Tang; Alexandros D Polydorides; Sharmila Anandasabapathy; Rebecca R Richards-Kortum
Journal:  J Biomed Opt       Date:  2018-11       Impact factor: 3.170

Review 8.  Multiphoton intravital microscopy in small animals: motion artefact challenges and technical solutions.

Authors:  D Soulet; J Lamontagne-Proulx; B Aubé; D Davalos
Journal:  J Microsc       Date:  2020-03-05       Impact factor: 1.758

9.  Towards monitoring dysplastic progression in the oral cavity using a hybrid fiber-bundle imaging and spectroscopy probe.

Authors:  Gage J Greening; Haley M James; Mary K Dierks; Nontapoth Vongkittiargorn; Samantha M Osterholm; Narasimhan Rajaram; Timothy J Muldoon
Journal:  Sci Rep       Date:  2016-05-25       Impact factor: 4.379

Review 10.  In-vivo optical imaging in head and neck oncology: basic principles, clinical applications and future directions.

Authors:  Chenzhou Wu; John Gleysteen; Nutte Tarn Teraphongphom; Yi Li; Eben Rosenthal
Journal:  Int J Oral Sci       Date:  2018-03-18       Impact factor: 6.344

  10 in total

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