Literature DB >> 25910407

Somatic mosaicism: implications for disease and transmission genetics.

Ian M Campbell1, Chad A Shaw2, Pawel Stankiewicz1, James R Lupski3.   

Abstract

Nearly all of the genetic material among cells within an organism is identical. However, single-nucleotide variants (SNVs), small insertions/deletions (indels), copy-number variants (CNVs), and other structural variants (SVs) continually accumulate as cells divide during development. This process results in an organism composed of countless cells, each with its own unique personal genome. Thus, every human is undoubtedly mosaic. Mosaic mutations can go unnoticed, underlie genetic disease or normal human variation, and may be transmitted to the next generation as constitutional variants. We review the influence of the developmental timing of mutations, the mechanisms by which they arise, methods for detecting mosaic variants, and the risk of passing these mutations on to the next generation.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  mosaicism; postzygotic mutation; recurrence risk; somatic mosaicism; transmission genetics

Mesh:

Year:  2015        PMID: 25910407      PMCID: PMC4490042          DOI: 10.1016/j.tig.2015.03.013

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  104 in total

1.  Detection of low-level mosaicism by array CGH in routine diagnostic specimens.

Authors:  Blake C Ballif; Emily A Rorem; Kyle Sundin; Matt Lincicum; Shannon Gaskin; Justine Coppinger; Catherine D Kashork; Lisa G Shaffer; Bassem A Bejjani
Journal:  Am J Med Genet A       Date:  2006-12-15       Impact factor: 2.802

2.  The origin, migration and fine morphology of human primordial germ cells.

Authors:  T Fujimoto; Y Miyayama; M Fuyuta
Journal:  Anat Rec       Date:  1977-07

3.  High rate of mosaicism in individuals with Cornelia de Lange syndrome.

Authors:  Sylvia A Huisman; Egbert J W Redeker; Saskia M Maas; Marcel M Mannens; Raoul C M Hennekam
Journal:  J Med Genet       Date:  2013-03-15       Impact factor: 6.318

Review 4.  Next-generation sequencing platforms.

Authors:  Elaine R Mardis
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2013       Impact factor: 10.745

5.  Exclusion of chromosomal mosaicism: tables of 90%, 95% and 99% confidence limits and comments on use.

Authors:  E B Hook
Journal:  Am J Hum Genet       Date:  1977-01       Impact factor: 11.025

6.  Utility of SNP arrays in detecting, quantifying, and determining meiotic origin of tetrasomy 12p in blood from individuals with Pallister-Killian syndrome.

Authors:  Laura K Conlin; Maninder Kaur; Kosuke Izumi; Lindsey Campbell; Alisha Wilkens; Dinah Clark; Matthew A Deardorff; Elaine H Zackai; Phillip Pallister; Hakon Hakonarson; Nancy B Spinner; Ian D Krantz
Journal:  Am J Med Genet A       Date:  2012-11-20       Impact factor: 2.802

7.  Somatic mosaic activating mutations in PIK3CA cause CLOVES syndrome.

Authors:  Kyle C Kurek; Valerie L Luks; Ugur M Ayturk; Ahmad I Alomari; Steven J Fishman; Samantha A Spencer; John B Mulliken; Margot E Bowen; Guilherme L Yamamoto; Harry P W Kozakewich; Matthew L Warman
Journal:  Am J Hum Genet       Date:  2012-05-31       Impact factor: 11.025

8.  Diagnosis of CMT1A duplications and HNPP deletions by interphase FISH: implications for testing in the cytogenetics laboratory.

Authors:  L G Shaffer; G M Kennedy; A S Spikes; J R Lupski
Journal:  Am J Med Genet       Date:  1997-03-31

9.  Beyond translesion synthesis: polymerase κ fidelity as a potential determinant of microsatellite stability.

Authors:  Suzanne E Hile; Xiaoxiao Wang; Marietta Y W T Lee; Kristin A Eckert
Journal:  Nucleic Acids Res       Date:  2011-10-22       Impact factor: 16.971

10.  Parental somatic mosaicism is underrecognized and influences recurrence risk of genomic disorders.

Authors:  Ian M Campbell; Bo Yuan; Caroline Robberecht; Rolph Pfundt; Przemyslaw Szafranski; Meriel E McEntagart; Sandesh C S Nagamani; Ayelet Erez; Magdalena Bartnik; Barbara Wiśniowiecka-Kowalnik; Katie S Plunkett; Amber N Pursley; Sung-Hae L Kang; Weimin Bi; Seema R Lalani; Carlos A Bacino; Mala Vast; Karen Marks; Michael Patton; Peter Olofsson; Ankita Patel; Joris A Veltman; Sau Wai Cheung; Chad A Shaw; Lisenka E L M Vissers; Joris R Vermeesch; James R Lupski; Paweł Stankiewicz
Journal:  Am J Hum Genet       Date:  2014-07-31       Impact factor: 11.025

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  94 in total

Review 1.  Protective alleles and modifier variants in human health and disease.

Authors:  Andrew R Harper; Shalini Nayee; Eric J Topol
Journal:  Nat Rev Genet       Date:  2015-10-27       Impact factor: 53.242

Review 2.  Somatic mosaicism: on the road to cancer.

Authors:  Luis C Fernández; Miguel Torres; Francisco X Real
Journal:  Nat Rev Cancer       Date:  2015-12-18       Impact factor: 60.716

Review 3.  Biological Processes Discovered by High-Throughput Sequencing.

Authors:  Brian J Reon; Anindya Dutta
Journal:  Am J Pathol       Date:  2016-01-30       Impact factor: 4.307

Review 4.  Detecting Somatic Mutations in Normal Cells.

Authors:  Yanmei Dou; Heather D Gold; Lovelace J Luquette; Peter J Park
Journal:  Trends Genet       Date:  2018-05-03       Impact factor: 11.639

5.  Alternative outcomes of pathogenic complex somatic structural variations in the genomes of NF1 and NF2 patients.

Authors:  Meng-Chang Hsiao; Arkadiusz Piotrowski; Andrzej Brunon Poplawski; Tom Callens; Chuanhua Fu; Ludwine Messiaen
Journal:  Neurogenetics       Date:  2017-03-11       Impact factor: 2.660

6.  De novo unbalanced translocations have a complex history/aetiology.

Authors:  Maria Clara Bonaglia; Nehir Edibe Kurtas; Edoardo Errichiello; Sara Bertuzzo; Silvana Beri; Mana M Mehrjouy; Aldesia Provenzano; Debora Vergani; Vanna Pecile; Francesca Novara; Paolo Reho; Marilena Carmela Di Giacomo; Giancarlo Discepoli; Roberto Giorda; Micheala A Aldred; Cíntia Barros Santos-Rebouças; Andressa Pereira Goncalves; Diane N Abuelo; Sabrina Giglio; Ivana Ricca; Fabrizia Franchi; Philippos Patsalis; Carolina Sismani; María Angeles Morí; Julián Nevado; Niels Tommerup; Orsetta Zuffardi
Journal:  Hum Genet       Date:  2018-10-01       Impact factor: 4.132

7.  Detection and quantification of a KIF11 mosaicism in a subject presenting familial exudative vitreoretinopathy with microcephaly.

Authors:  Dyah W Karjosukarso; Frans P M Cremers; C Erik van Nouhuys; Rob W J Collin
Journal:  Eur J Hum Genet       Date:  2018-09-04       Impact factor: 4.246

Review 8.  Mechanisms underlying structural variant formation in genomic disorders.

Authors:  Claudia M B Carvalho; James R Lupski
Journal:  Nat Rev Genet       Date:  2016-02-29       Impact factor: 53.242

Review 9.  Mosaicism in Cutaneous Disorders.

Authors:  Young H Lim; Zoe Moscato; Keith A Choate
Journal:  Annu Rev Genet       Date:  2017-11-27       Impact factor: 16.830

10.  Exonic Mosaic Mutations Contribute Risk for Autism Spectrum Disorder.

Authors:  Deidre R Krupp; Rebecca A Barnard; Yannis Duffourd; Sara A Evans; Ryan M Mulqueen; Raphael Bernier; Jean-Baptiste Rivière; Eric Fombonne; Brian J O'Roak
Journal:  Am J Hum Genet       Date:  2017-08-31       Impact factor: 11.025

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