Literature DB >> 25910244

Small molecule fluoride toxicity agonists.

James W Nelson1, Mark S Plummer2, Kenneth F Blount2, Tyler D Ames2, Ronald R Breaker3.   

Abstract

Fluoride is a ubiquitous anion that inhibits a wide variety of metabolic processes. Here, we report the identification of a series of compounds that enhance fluoride toxicity in Escherichia coli and Streptococcus mutans. These molecules were isolated by using a high-throughput screen (HTS) for compounds that increase intracellular fluoride levels as determined via a fluoride riboswitch reporter fusion construct. A series of derivatives were synthesized to examine structure-activity relationships, leading to the identification of compounds with improved activity. Thus, we demonstrate that small molecule fluoride toxicity agonists can be identified by HTS from existing chemical libraries by exploiting a natural fluoride riboswitch. In addition, our findings suggest that some molecules might be further optimized to function as binary antibacterial agents when combined with fluoride.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 25910244      PMCID: PMC4617673          DOI: 10.1016/j.chembiol.2015.03.016

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  36 in total

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2.  Eukaryotic resistance to fluoride toxicity mediated by a widespread family of fluoride export proteins.

Authors:  Sanshu Li; Kathryn D Smith; Jared H Davis; Patricia B Gordon; Ronald R Breaker; Scott A Strobel
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-30       Impact factor: 11.205

Review 3.  Riboswitches: discovery of drugs that target bacterial gene-regulatory RNAs.

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4.  Nature of urea-fluoride interaction: incipient and definitive proton transfer.

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Review 5.  Themes and variations in riboswitch structure and function.

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Journal:  Biochim Biophys Acta       Date:  2014-02-28

6.  Phenyl thiazolyl urea and carbamate derivatives as new inhibitors of bacterial cell-wall biosynthesis.

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Journal:  Bioorg Med Chem Lett       Date:  2004-01-05       Impact factor: 2.823

Review 7.  Whither triclosan?

Authors:  A D Russell
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8.  Novel riboswitch ligand analogs as selective inhibitors of guanine-related metabolic pathways.

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Journal:  Bioorg Med Chem Lett       Date:  2003-08-04       Impact factor: 2.823

10.  Design and antimicrobial action of purine analogues that bind Guanine riboswitches.

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  14 in total

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2.  Employing a ZTP Riboswitch to Detect Bacterial Folate Biosynthesis Inhibitors in a Small Molecule High-Throughput Screen.

Authors:  Kevin R Perkins; Ruben M Atilho; Michelle H Moon; Ronald R Breaker
Journal:  ACS Chem Biol       Date:  2019-11-14       Impact factor: 5.100

3.  An Archaeal Fluoride-Responsive Riboswitch Provides an Inducible Expression System for Hyperthermophiles.

Authors:  Michael Clayton Speed; Brett W Burkhart; Jonathan W Picking; Thomas J Santangelo
Journal:  Appl Environ Microbiol       Date:  2018-03-19       Impact factor: 4.792

Review 4.  Metalloriboswitches: RNA-based inorganic ion sensors that regulate genes.

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Journal:  J Biol Chem       Date:  2017-04-28       Impact factor: 5.157

5.  Microwell Fluoride Screen for Chemical, Enzymatic, and Cellular Reactions Reveals Latent Microbial Defluorination Capacity for -CF3 Groups.

Authors:  Madison D Bygd; Kelly G Aukema; Jack E Richman; Lawrence P Wackett
Journal:  Appl Environ Microbiol       Date:  2022-04-18       Impact factor: 5.005

6.  An in vivo high-throughput screening for riboswitch ligands using a reverse reporter gene system.

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Journal:  Sci Rep       Date:  2017-08-10       Impact factor: 4.379

7.  A bacterial riboswitch class senses xanthine and uric acid to regulate genes associated with purine oxidation.

Authors:  Diane Yu; Ronald R Breaker
Journal:  RNA       Date:  2020-04-28       Impact factor: 4.942

Review 8.  Synthetic biology for pharmaceutical drug discovery.

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Journal:  Drug Des Devel Ther       Date:  2015-12-03       Impact factor: 4.162

9.  High Affinity Binding of N2-Modified Guanine Derivatives Significantly Disrupts the Ligand Binding Pocket of the Guanine Riboswitch.

Authors:  Michal M Matyjasik; Simone D Hall; Robert T Batey
Journal:  Molecules       Date:  2020-05-13       Impact factor: 4.411

10.  Rare variants of the FMN riboswitch class in Clostridium difficile and other bacteria exhibit altered ligand specificity.

Authors:  Ruben M Atilho; Kevin R Perkins; Ronald R Breaker
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