Literature DB >> 25907614

The unravelling of the ubiquitin system.

Aaron Ciechanover1.   

Abstract

Today, many scientific discoveries are made using a top-down experimental approach. The ubiquitin system was discovered using a 'classic' bottom-up approach to tackle the question: 'how are cellular proteins selectively degraded?' A simple proteolytic assay, which used a crude cell-extract, was all that was required to address this question; it was followed by fractionation and reconstitution experiments to decipher the role of the components in this multi-step process. This 'biochemistry at its best' approach, which was published in a periodical that today would not be regarded as highly visible, provided magnificent findings.

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Year:  2015        PMID: 25907614     DOI: 10.1038/nrm3982

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  17 in total

1.  Turnover of protein in growing and non-growing populations of Escherichia coli.

Authors:  J MANDELSTAM
Journal:  Biochem J       Date:  1958-05       Impact factor: 3.857

2.  Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A to heritable gene silencing and X inactivation.

Authors:  Mariana de Napoles; Jacqueline E Mermoud; Rika Wakao; Y Amy Tang; Mitusuhiro Endoh; Ruth Appanah; Tatyana B Nesterova; Jose Silva; Arie P Otte; Miguel Vidal; Haruhiko Koseki; Neil Brockdorff
Journal:  Dev Cell       Date:  2004-11       Impact factor: 12.270

Review 3.  Functions of lysosomes.

Authors:  C De Duve; R Wattiaux
Journal:  Annu Rev Physiol       Date:  1966       Impact factor: 19.318

4.  Immunochemical analysis of the turnover of ubiquitin-protein conjugates in intact cells. Relationship to the breakdown of abnormal proteins.

Authors:  A Hershko; E Eytan; A Ciechanover; A L Haas
Journal:  J Biol Chem       Date:  1982-12-10       Impact factor: 5.157

5.  ATP-dependent conjugation of reticulocyte proteins with the polypeptide required for protein degradation.

Authors:  A Ciechanover; H Heller; S Elias; A L Haas; A Hershko
Journal:  Proc Natl Acad Sci U S A       Date:  1980-03       Impact factor: 11.205

6.  Demonstration of two distinct high molecular weight proteases in rabbit reticulocytes, one of which degrades ubiquitin conjugates.

Authors:  L Waxman; J M Fagan; A L Goldberg
Journal:  J Biol Chem       Date:  1987-02-25       Impact factor: 5.157

7.  Ubiquitin-lysozyme conjugates. Identification and characterization of an ATP-dependent protease from rabbit reticulocyte lysates.

Authors:  R Hough; G Pratt; M Rechsteiner
Journal:  J Biol Chem       Date:  1986-02-15       Impact factor: 5.157

8.  Ubiquitin is the ATP-dependent proteolysis factor I of rabbit reticulocytes.

Authors:  K D Wilkinson; M K Urban; A L Haas
Journal:  J Biol Chem       Date:  1980-08-25       Impact factor: 5.157

9.  Components of ubiquitin-protein ligase system. Resolution, affinity purification, and role in protein breakdown.

Authors:  A Hershko; H Heller; S Elias; A Ciechanover
Journal:  J Biol Chem       Date:  1983-07-10       Impact factor: 5.157

10.  Isopeptide linkage between nonhistone and histone 2A polypeptides of chromosomal conjugate-protein A24.

Authors:  I L Goldknopf; H Busch
Journal:  Proc Natl Acad Sci U S A       Date:  1977-03       Impact factor: 11.205

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  86 in total

1.  Targeting the ubiquitin-conjugating enzyme E2D4 for cancer drug discovery-a structure-based approach.

Authors:  Vishwanath Ramatenki; Ramakrishna Dumpati; Rajender Vadija; Santhiprada Vellanki; Sarita Rajender Potlapally; Rohini Rondla; Uma Vuruputuri
Journal:  J Chem Biol       Date:  2016-12-24

2.  LPS promotes HBO1 stability via USP25 to modulate inflammatory gene transcription in THP-1 cells.

Authors:  Chen Long; Yandong Lai; Jin Li; Jiangsheng Huang; Chunbin Zou
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2018-08-04       Impact factor: 4.490

3.  Deubiquitinase Activity Profiling Identifies UCHL1 as a Candidate Oncoprotein That Promotes TGFβ-Induced Breast Cancer Metastasis.

Authors:  Sijia Liu; Román González-Prieto; Mengdi Zhang; Paul P Geurink; Raymond Kooij; Prasanna Vasudevan Iyengar; Maarten van Dinther; Erik Bos; Xiaobing Zhang; Sylvia E Le Dévédec; Bob van de Water; Roman I Koning; Hong-Jian Zhu; Wilma E Mesker; Alfred C O Vertegaal; Huib Ovaa; Long Zhang; John W M Martens; Peter Ten Dijke
Journal:  Clin Cancer Res       Date:  2019-12-19       Impact factor: 12.531

Review 4.  Targeted Protein Degradation by Small Molecules.

Authors:  Daniel P Bondeson; Craig M Crews
Journal:  Annu Rev Pharmacol Toxicol       Date:  2016-10-12       Impact factor: 13.820

5.  Inhibition of USP14 induces ER stress-mediated autophagy without apoptosis in lung cancer cell line A549.

Authors:  Ali-Asghar Moghadami; Elmira Aboutalebi Vand Beilankouhi; Ashkan Kalantary-Charvadeh; Masoud Hamzavi; Bashir Mosayyebi; Hassan Sedghi; Amir Ghorbani Haghjo; Saeed Nazari Soltan Ahmad
Journal:  Cell Stress Chaperones       Date:  2020-07-06       Impact factor: 3.667

6.  Loss of the deubiquitinase USP36 destabilizes the RNA helicase DHX33 and causes preimplantation lethality in mice.

Authors:  Julia M Fraile; Diana Campos-Iglesias; Francisco Rodríguez; Aurora Astudillo; Roser Vilarrasa-Blasi; Nuria Verdaguer-Dot; Miguel A Prado; Joao A Paulo; Steven P Gygi; José I Martín-Subero; José M P Freije; Carlos López-Otín
Journal:  J Biol Chem       Date:  2017-12-22       Impact factor: 5.157

7.  The UBC27-AIRP3 ubiquitination complex modulates ABA signaling by promoting the degradation of ABI1 in Arabidopsis.

Authors:  Wenbo Pan; Baoying Lin; Xiaoyuan Yang; Lijing Liu; Ran Xia; Jigang Li; Yaorong Wu; Qi Xie
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-19       Impact factor: 11.205

8.  Targeting STUB1-tissue factor axis normalizes hyperthrombotic uremic phenotype without increasing bleeding risk.

Authors:  Moshe Shashar; Mostafa E Belghasem; Shinobu Matsuura; Joshua Walker; Sean Richards; Faisal Alousi; Keshab Rijal; Vijaya B Kolachalama; Mercedes Balcells; Minami Odagi; Kazuo Nagasawa; Joel M Henderson; Amitabh Gautam; Richard Rushmore; Jean Francis; Daniel Kirchhofer; Kumaran Kolandaivelu; David H Sherr; Elazer R Edelman; Katya Ravid; Vipul C Chitalia
Journal:  Sci Transl Med       Date:  2017-11-22       Impact factor: 17.956

Review 9.  The MID1 gene product in physiology and disease.

Authors:  Rossella Baldini; Martina Mascaro; Germana Meroni
Journal:  Gene       Date:  2020-04-10       Impact factor: 3.688

Review 10.  Ubiquitin-proteasome signaling in lung injury.

Authors:  Natalia D Magnani; Laura A Dada; Jacob I Sznajder
Journal:  Transl Res       Date:  2018-04-23       Impact factor: 7.012

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