Literature DB >> 25906993

A DNA ligase required for active DNA demethylation and genomic imprinting in Arabidopsis.

Yan Li1, Cheng-Guo Duan2, Xiaohong Zhu3, Weiqiang Qian4, Jian-Kang Zhu3.   

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Year:  2015        PMID： 25906993      PMCID： PMC4456619          DOI： 10.1038/cr.2015.45

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  14 in total

1.  One-way control of FWA imprinting in Arabidopsis endosperm by DNA methylation.

Authors:  Tetsu Kinoshita; Asuka Miura; Yeonhee Choi; Yuki Kinoshita; Xiaofeng Cao; Steven E Jacobsen; Robert L Fischer; Tetsuji Kakutani
Journal:  Science       Date:  2003-11-20       Impact factor: 47.728

2.  An evolutionarily conserved translation initiation mechanism regulates nuclear or mitochondrial targeting of DNA ligase 1 in Arabidopsis thaliana.

Authors:  Paul A Sunderland; Christopher E West; Wanda M Waterworth; Clifford M Bray
Journal:  Plant J       Date:  2006-06-20       Impact factor: 6.417

3.  HMG domain containing SSRP1 is required for DNA demethylation and genomic imprinting in Arabidopsis.

Authors:  Yoko Ikeda; Yuki Kinoshita; Daichi Susaki; Yuriko Ikeda; Megumi Iwano; Seiji Takayama; Tetsuya Higashiyama; Tetsuji Kakutani; Tetsu Kinoshita
Journal:  Dev Cell       Date:  2011-09-13       Impact factor: 12.270

4.  DNA LIGASE I exerts a maternal effect on seed development in Arabidopsis thaliana.

Authors:  Sebastien Andreuzza; Jing Li; Anne-Elisabeth Guitton; Jean-Emmanuel Faure; Sandrine Casanova; Jin-Sup Park; Yeonhee Choi; Zhong Chen; Frédéric Berger
Journal:  Development       Date:  2010-01       Impact factor: 6.868

5.  Arabidopsis ARP endonuclease functions in a branched base excision DNA repair pathway completed by LIG1.

Authors:  Dolores Córdoba-Cañero; Teresa Roldán-Arjona; Rafael R Ariza
Journal:  Plant J       Date:  2011-09-13       Impact factor: 6.417

6.  The Arabidopsis AtLIG4 gene is required for the repair of DNA damage, but not for the integration of Agrobacterium T-DNA.

Authors:  Haico van Attikum; Paul Bundock; René M Overmeer; Lan-Ying Lee; Stanton B Gelvin; Paul J J Hooykaas
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

7.  Molecular cloning and functional analysis of the Arabidopsis thaliana DNA ligase I homologue.

Authors:  R M Taylor; M J Hamer; J Rosamond; C M Bray
Journal:  Plant J       Date:  1998-04       Impact factor: 6.417

8.  ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase.

Authors:  Zhizhong Gong; Teresa Morales-Ruiz; Rafael R Ariza; Teresa Roldán-Arjona; Lisa David; Jian Kang Zhu
Journal:  Cell       Date:  2002-12-13       Impact factor: 41.582

9.  An AP endonuclease functions in active DNA demethylation and gene imprinting in Arabidopsis [corrected].

Authors:  Yan Li; Dolores Córdoba-Cañero; Weiqiang Qian; Xiaohong Zhu; Kai Tang; Huiming Zhang; Rafael R Ariza; Teresa Roldán-Arjona; Jian-Kang Zhu
Journal:  PLoS Genet       Date:  2015-01-08       Impact factor: 5.917

10.  DNA ligase 1 deficient plants display severe growth defects and delayed repair of both DNA single and double strand breaks.

Authors:  Wanda M Waterworth; Jaroslav Kozak; Claire M Provost; Clifford M Bray; Karel J Angelis; Christopher E West
Journal:  BMC Plant Biol       Date:  2009-06-26       Impact factor: 4.215
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  8 in total

1.  Critical roles of DNA demethylation in the activation of ripening-induced genes and inhibition of ripening-repressed genes in tomato fruit.

Authors:  Zhaobo Lang; Yihai Wang; Kai Tang; Dengguo Tang; Tatsiana Datsenka; Jingfei Cheng; Yijing Zhang; Avtar K Handa; Jian-Kang Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-15       Impact factor: 11.205

2.  The DNA demethylase ROS1 targets genomic regions with distinct chromatin modifications.

Authors:  Kai Tang; Zhaobo Lang; Heng Zhang; Jian-Kang Zhu
Journal:  Nat Plants       Date:  2016-10-31       Impact factor: 15.793

3.  Multi-omics data integration reveals link between epigenetic modifications and gene expression in sugar beet (Beta vulgaris subsp. vulgaris) in response to cold.

Authors:  Sindy Gutschker; José María Corral; Alfred Schmiedl; Frank Ludewig; Wolfgang Koch; Karin Fiedler-Wiechers; Olaf Czarnecki; Karsten Harms; Isabel Keller; Cristina Martins Rodrigues; Benjamin Pommerrenig; H Ekkehard Neuhaus; Wolfgang Zierer; Uwe Sonnewald; Christina Müdsam
Journal:  BMC Genomics       Date:  2022-02-17       Impact factor: 3.969

Review 4.  You shall not pass! A Chromatin barrier story in plants.

Authors:  Florent Velay; Louis-Valentin Méteignier; Christophe Laloi
Journal:  Front Plant Sci       Date:  2022-09-20       Impact factor: 6.627

5.  Involvement of MEM1 in DNA demethylation in Arabidopsis.

Authors:  Yanke Lu; Jie Dai; Liu Yang; Yumei La; Shaoxia Zhou; Sheng Qiang; Qianqian Wang; Feng Tan; Yufeng Wu; Weiwen Kong; Honggui La
Journal:  Plant Mol Biol       Date:  2020-01-04       Impact factor: 4.076

Review 6.  Active DNA demethylation: mechanism and role in plant development.

Authors:  Yan Li; Suresh Kumar; Weiqiang Qian
Journal:  Plant Cell Rep       Date:  2017-10-12       Impact factor: 4.570

7.  Genome-Wide Characterization of DNA Demethylase Genes and Their Association with Salt Response in Pyrus.

Authors:  Chunxiao Liu; Hui Li; Jing Lin; Ying Wang; Xiaoyang Xu; Zong-Ming Max Cheng; Yonghong Chang
Journal:  Genes (Basel)       Date:  2018-08-06       Impact factor: 4.096

Review 8.  Active DNA Demethylation in Plants.

Authors:  Jara Teresa Parrilla-Doblas; Teresa Roldán-Arjona; Rafael R Ariza; Dolores Córdoba-Cañero
Journal:  Int J Mol Sci       Date:  2019-09-21       Impact factor: 5.923
  8 in total

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