Literature DB >> 25903301

Retention-time prediction for polycyclic aromatic compounds in reversed-phase capillary electro-chromatography.

Peter Feenstra1, Heidrun Gruber-Wölfler, Michael Brunsteiner, Johannes Khinast.   

Abstract

Log Po/w based models are often used for the retention time prediction of reversed phase liquid chromatography. Here, we present the investigation of the applicability of log Po/w based retention time predictions for the separation in capillary electro-chromatography (CEC). A test set of five polycyclic aromatic hydrocarbons was separated using two different stationary phases with three different mobile phases each. The resulting retention times were correlated with the experimental log Po/w values as well as with calculated log Po/w values. The used methods include quantitative structure property relationship (QSPR) models as well as molecular dynamic methods such as the linear interaction energy (LIE) or the Bennett acceptance ratio (BAR). The results indicate that rigorous simulation models are capable of accurately reproducing experimental results and that the electrophoretic mobility of analytes in CEC separations leads to significant deviations in the retention time prediction.

Entities:  

Year:  2015        PMID: 25903301     DOI: 10.1007/s00894-015-2668-3

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  29 in total

1.  Binding constants of neuraminidase inhibitors: An investigation of the linear interaction energy method.

Authors:  I D Wall; A R Leach; D W Salt; M G Ford; J W Essex
Journal:  J Med Chem       Date:  1999-12-16       Impact factor: 7.446

2.  Use of semi-permeable membrane devices and solid-phase extraction for the wide-range screening of microcontaminants in surface water by GC-AED/MS.

Authors:  Leo L P van Stee; Pim E G Leonards; Willem M G M van Loon; A Jan Hendriks; Johanna L Maas; Jaap Struijs; Udo A Th Brinkman
Journal:  Water Res       Date:  2002-11       Impact factor: 11.236

3.  Linear Interaction Energy (LIE) Models for Ligand Binding in Implicit Solvent:  Theory and Application to the Binding of NNRTIs to HIV-1 Reverse Transcriptase.

Authors:  Yang Su; Emilio Gallicchio; Kalyan Das; Eddy Arnold; Ronald M Levy
Journal:  J Chem Theory Comput       Date:  2007-01       Impact factor: 6.006

4.  The effect of solvent polarity on the accumulation of leachables from pharmaceutical product containers.

Authors:  Dennis Jenke; Alex Odufu; Mitchell Poss
Journal:  Eur J Pharm Sci       Date:  2005-10-24       Impact factor: 4.384

Review 5.  Calculation of protein-ligand binding affinities.

Authors:  Michael K Gilson; Huan-Xiang Zhou
Journal:  Annu Rev Biophys Biomol Struct       Date:  2007

6.  In vitro bioaccessibility of soil-bound polycyclic aromatic hydrocarbons in successive digestive compartments in cows.

Authors:  Stefan Jurjanz; Guido Rychen
Journal:  J Agric Food Chem       Date:  2007-09-20       Impact factor: 5.279

7.  Direct measurement of octanol-water partition coefficients by high-pressure liquid chromatography.

Authors:  M S Mirrlees; S J Moulton; C T Murphy; P J Taylor
Journal:  J Med Chem       Date:  1976-05       Impact factor: 7.446

8.  Ligand binding affinity prediction by linear interaction energy methods.

Authors:  T Hansson; J Marelius; J Aqvist
Journal:  J Comput Aided Mol Des       Date:  1998-01       Impact factor: 3.686

9.  The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin.

Authors:  W L Jorgensen; J Tirado-Rives
Journal:  J Am Chem Soc       Date:  1988-03-01       Impact factor: 15.419

10.  A new method for predicting binding affinity in computer-aided drug design.

Authors:  J Aqvist; C Medina; J E Samuelsson
Journal:  Protein Eng       Date:  1994-03
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