Literature DB >> 25900561

Stress responsive miRNAs and isomiRs in cereals.

Hikmet Budak1, Melda Kantar2, Reyyan Bulut2, Bala Ani Akpinar2.   

Abstract

Abiotic and biotic stress conditions are vital determinants in the production of cereals, the major caloric source in human nutrition. Small RNAs, miRNAs and isomiRs are central to post-transcriptional regulation of gene expression in a variety of cellular processes including development and stress responses. Several miRNAs have been identified using new technologies and have roles in stress responses in plants, including cereals. The overall knowledge about the cereal miRNA repertoire, as well as an understanding of complex miRNA mediated mechanisms of target regulation in response to stress conditions, is far from complete. Ongoing efforts that add to our understanding of complex miRNA machinery have implications in plant response to stress conditions. Additionally, sequence variants of miRNAs (isomiRNAs or isomiRs), regulation of their expression through dissection of upstream regulatory elements, the role of Processing-bodies (P-bodies) in miRNA exerted gene regulation and yet unveiled organellar plant miRNAs are newly emerging topics, which will contribute to the elucidation of the miRNA machinery and its role in cereal tolerance against abiotic and biotic stresses.
Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  P-bodies; Plants; cipomiRs; isomiRs; miRNA; mitomiRs

Mesh:

Substances:

Year:  2015        PMID: 25900561     DOI: 10.1016/j.plantsci.2015.02.008

Source DB:  PubMed          Journal:  Plant Sci        ISSN: 0168-9452            Impact factor:   4.729


  77 in total

1.  Root precursors of microRNAs in wild emmer and modern wheats show major differences in response to drought stress.

Authors:  Bala Ani Akpinar; Melda Kantar; Hikmet Budak
Journal:  Funct Integr Genomics       Date:  2015-07-15       Impact factor: 3.410

2.  Identification of drought-responsive microRNAs in tomato using high-throughput sequencing.

Authors:  Minmin Liu; Huiyang Yu; Gangjun Zhao; Qiufeng Huang; Yongen Lu; Bo Ouyang
Journal:  Funct Integr Genomics       Date:  2017-09-28       Impact factor: 3.410

Review 3.  Plant miRNAs: biogenesis, organization and origins.

Authors:  Hikmet Budak; B Ani Akpinar
Journal:  Funct Integr Genomics       Date:  2015-06-26       Impact factor: 3.410

4.  The Accumulation of miRNAs Differentially Modulated by Drought Stress Is Affected by Grafting in Grapevine.

Authors:  Chiara Pagliarani; Marco Vitali; Manuela Ferrero; Nicola Vitulo; Marco Incarbone; Claudio Lovisolo; Giorgio Valle; Andrea Schubert
Journal:  Plant Physiol       Date:  2017-02-24       Impact factor: 8.340

5.  Identification and characterization of durum wheat microRNAs in leaf and root tissues.

Authors:  Veronica Fileccia; Edoardo Bertolini; Paolo Ruisi; Dario Giambalvo; Alfonso Salvatore Frenda; Gina Cannarozzi; Zerihun Tadele; Cristina Crosatti; Federico Martinelli
Journal:  Funct Integr Genomics       Date:  2017-03-20       Impact factor: 3.410

6.  microRNAs differentially modulated in response to heat and drought stress in durum wheat cultivars with contrasting water use efficiency.

Authors:  Lorenzo Giusti; Erica Mica; Edoardo Bertolini; Anna Maria De Leonardis; Primetta Faccioli; Luigi Cattivelli; Cristina Crosatti
Journal:  Funct Integr Genomics       Date:  2016-10-12       Impact factor: 3.410

7.  Characterization of miRNAs responsive to exogenous ethylene in grapevine berries at whole genome level.

Authors:  Fanggui Zhao; Chen Wang; Jian Han; Xudong Zhu; Xiaopeng Li; Xicheng Wang; Jinggui Fang
Journal:  Funct Integr Genomics       Date:  2016-09-30       Impact factor: 3.410

8.  MicroRNAs in model and complex organisms.

Authors:  Hikmet Budak; Baohong Zhang
Journal:  Funct Integr Genomics       Date:  2017-05       Impact factor: 3.410

9.  High-throughput sequencing of small RNAs revealed the diversified cold-responsive pathways during cold stress in the wild banana (Musa itinerans).

Authors:  Weihua Liu; Chunzhen Cheng; Fanglan Chen; Shanshan Ni; Yuling Lin; Zhongxiong Lai
Journal:  BMC Plant Biol       Date:  2018-11-29       Impact factor: 4.215

10.  Water-deficit stress-responsive microRNAs and their targets in four durum wheat genotypes.

Authors:  Haipei Liu; Amanda J Able; Jason A Able
Journal:  Funct Integr Genomics       Date:  2016-08-25       Impact factor: 3.410

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