Literature DB >> 25896534

A genome-wide association study identifies a new locus associated with the response to anti-TNF therapy in rheumatoid arthritis.

A Julià1, A Fernandez-Nebro2, F Blanco3, A Ortiz4, J D Cañete5, J Maymó6, M Alperi-López7, B Fernández-Gutierrez8, A Olivè9, H Corominas10, A Erra11, I Acosta-Colman1, A Alonso1, M López-Lasanta1, R Tortosa1, J Tornero12, S Marsal1.   

Abstract

Anti-Tumor Necrosis Factor (anti-TNF) drugs are biologic agents commonly used to treat rheumatoid arthritis (RA). However, anti-TNFs are not effective in approximately one out of four treated patients. We conducted a Genome-Wide Association Study (GWAS) to identify the genetic variation associated with the response to anti-TNF therapy in RA. In the discovery stage, 372 RA patients treated with an anti-TNF agent (infliximab, adalimumab or etanercept) were analyzed and treatment response was defined at 12 weeks of therapy. We found a genome-wide significant association in the MED15 gene with the response to etanercept (P<1.5e-8). Using an independent cohort of 245 RA patients, we performed a replication study of the most significant GWAS associations. We replicated the association at the MED15 locus and found suggestive evidence of association in the previously associated MAFB locus. The results of this study suggest novel mechanisms associated with the response to anti-TNF therapies.

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Year:  2015        PMID: 25896534     DOI: 10.1038/tpj.2015.31

Source DB:  PubMed          Journal:  Pharmacogenomics J        ISSN: 1470-269X            Impact factor:   3.550


  36 in total

1.  A linear complexity phasing method for thousands of genomes.

Authors:  Olivier Delaneau; Jonathan Marchini; Jean-François Zagury
Journal:  Nat Methods       Date:  2011-12-04       Impact factor: 28.547

2.  Principal components analysis corrects for stratification in genome-wide association studies.

Authors:  Alkes L Price; Nick J Patterson; Robert M Plenge; Michael E Weinblatt; Nancy A Shadick; David Reich
Journal:  Nat Genet       Date:  2006-07-23       Impact factor: 38.330

3.  Virally mediated MafB transduction induces the monocyte commitment of human CD34+ hematopoietic stem/progenitor cells.

Authors:  C Gemelli; M Montanari; E Tenedini; T Zanocco Marani; T Vignudelli; M Siena; R Zini; S Salati; E Tagliafico; R Manfredini; A Grande; S Ferrari
Journal:  Cell Death Differ       Date:  2006-02-03       Impact factor: 15.828

4.  Immunologic features of chromosome 22q11.2 deletion syndrome (DiGeorge syndrome/velocardiofacial syndrome).

Authors:  A F Jawad; D M McDonald-Mcginn; E Zackai; K E Sullivan
Journal:  J Pediatr       Date:  2001-11       Impact factor: 4.406

5.  The Disease Activity Score and the EULAR response criteria.

Authors:  J Fransen; P L C M van Riel
Journal:  Clin Exp Rheumatol       Date:  2005 Sep-Oct       Impact factor: 4.473

6.  Genome-wide association scan identifies candidate polymorphisms associated with differential response to anti-TNF treatment in rheumatoid arthritis.

Authors:  Chunyu Liu; Franak Batliwalla; Wentian Li; Annette Lee; Ronenn Roubenoff; Evan Beckman; Houman Khalili; Aarti Damle; Marlena Kern; Richard Furie; Josée Dupuis; Robert M Plenge; Marieke J H Coenen; Timothy W Behrens; John P Carulli; Peter K Gregersen
Journal:  Mol Med       Date:  2008 Sep-Oct       Impact factor: 6.354

Review 7.  Anti-TNF biologic agents: still the therapy of choice for rheumatoid arthritis.

Authors:  Peter C Taylor; Marc Feldmann
Journal:  Nat Rev Rheumatol       Date:  2009-10       Impact factor: 20.543

8.  Lack of validation of genetic variants associated with anti-tumor necrosis factor therapy response in rheumatoid arthritis: a genome-wide association study replication and meta-analysis.

Authors:  Ana Márquez; Aida Ferreiro-Iglesias; Cristina L Dávila-Fajardo; Ariana Montes; Dora Pascual-Salcedo; Eva Perez-Pampin; Manuel J Moreno-Ramos; Rosa García-Portales; Federico Navarro; Virginia Moreira; César Magro; Rafael Caliz; Miguel Angel Ferrer; Juan José Alegre-Sancho; Beatriz Joven; Patricia Carreira; Alejandro Balsa; Yiannis Vasilopoulos; Theologia Sarafidou; José Cabeza-Barrera; Javier Narvaez; Enrique Raya; Juan D Cañete; Antonio Fernández-Nebro; María del Carmen Ordóñez; Arturo R de la Serna; Berta Magallares; Juan J Gomez-Reino; Antonio González; Javier Martín
Journal:  Arthritis Res Ther       Date:  2014-03-11       Impact factor: 5.156

9.  An integrated map of genetic variation from 1,092 human genomes.

Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

Review 10.  Leukotrienes, mast cells, and T cells.

Authors:  Iain B McInnes
Journal:  Arthritis Res Ther       Date:  2003-10-15       Impact factor: 5.156

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  18 in total

1.  Rheumatoid arthritis: Biomarkers of response to TNF inhibition in RA.

Authors:  Prabha Ranganathan
Journal:  Nat Rev Rheumatol       Date:  2015-06-16       Impact factor: 20.543

2.  Brief Report: The Role of Rare Protein-Coding Variants in Anti-Tumor Necrosis Factor Treatment Response in Rheumatoid Arthritis.

Authors:  Jing Cui; Dorothee Diogo; Eli A Stahl; Helena Canhao; Xavier Mariette; Jeffrey D Greenberg; Yukinori Okada; Dimitrios A Pappas; Robert S Fulton; Paul P Tak; Michael T Nurmohamed; Annette Lee; David E Larson; Fina Kurreeman; Tracie L Deluca; Michelle O'Laughlin; Catrina C Fronick; Lucinda L Fulton; Elaine R Mardis; Irene E van der Horst-Bruinsma; Gert-Jan Wolbink; Peter K Gregersen; Joel M Kremer; J Bart A Crusius; Niek de Vries; Tom W J Huizinga; João Eurico Fonseca; Corinne Miceli-Richard; Elizabeth W Karlson; Marieke J H Coenen; Anne Barton; Robert M Plenge; Soumya Raychaudhuri
Journal:  Arthritis Rheumatol       Date:  2017-04       Impact factor: 10.995

Review 3.  Potential clinical biomarkers in rheumatoid arthritis with an omic approach.

Authors:  Yolima Puentes-Osorio; Pedro Amariles; Miguel Ángel Calleja; Vicente Merino; Juan Camilo Díaz-Coronado; Daniel Taborda
Journal:  Auto Immun Highlights       Date:  2021-05-31

4.  Validation study of genetic biomarkers of response to TNF inhibitors in rheumatoid arthritis.

Authors:  Rosario Lopez-Rodriguez; Eva Perez-Pampin; Ana Marquez; Francisco J Blanco; Beatriz Joven; Patricia Carreira; Miguel Angel Ferrer; Rafael Caliz; Lara Valor; Javier Narvaez; Juan D Cañete; Maria Del Carmen Ordoñez; Sara Manrique-Arija; Yiannis Vasilopoulos; Alejandro Balsa; Dora Pascual-Salcedo; Manuel J Moreno-Ramos; Juan Jose Alegre-Sancho; Federico Navarro-Sarabia; Virginia Moreira; Rosa Garcia-Portales; Enrique Raya; Cesar Magro-Checa; Javier Martin; Juan J Gomez-Reino; Antonio Gonzalez
Journal:  PLoS One       Date:  2018-05-07       Impact factor: 3.240

Review 5.  Systematic review and meta-analysis: pharmacogenetics of anti-TNF treatment response in rheumatoid arthritis.

Authors:  S Bek; A B Bojesen; J V Nielsen; J Sode; S Bank; U Vogel; V Andersen
Journal:  Pharmacogenomics J       Date:  2017-06-13       Impact factor: 3.550

Review 6.  Genetic Polymorphisms Associated with Rheumatoid Arthritis Development and Antirheumatic Therapy Response.

Authors:  Dmitry S Mikhaylenko; Marina V Nemtsova; Irina V Bure; Ekaterina B Kuznetsova; Ekaterina A Alekseeva; Vadim V Tarasov; Alexander N Lukashev; Marina I Beloukhova; Andrei A Deviatkin; Andrey A Zamyatnin
Journal:  Int J Mol Sci       Date:  2020-07-11       Impact factor: 5.923

7.  Evaluation of 12 GWAS-drawn SNPs as biomarkers of rheumatoid arthritis response to TNF inhibitors. A potential SNP association with response to etanercept.

Authors:  Aida Ferreiro-Iglesias; Ariana Montes; Eva Perez-Pampin; Juan D Cañete; Enrique Raya; Cesar Magro-Checa; Yiannis Vasilopoulos; Rafael Caliz; Miguel Angel Ferrer; Beatriz Joven; Patricia Carreira; Alejandro Balsa; Dora Pascual-Salcedo; Francisco J Blanco; Manuel J Moreno-Ramos; Sara Manrique-Arija; María Del Carmen Ordoñez; Juan Jose Alegre-Sancho; Javier Narvaez; Federico Navarro-Sarabia; Virginia Moreira; Lara Valor; Rosa Garcia-Portales; Ana Marquez; Juan J Gomez-Reino; Javier Martin; Antonio Gonzalez
Journal:  PLoS One       Date:  2019-02-28       Impact factor: 3.240

8.  A Combined Transcriptomic and Genomic Analysis Identifies a Gene Signature Associated With the Response to Anti-TNF Therapy in Rheumatoid Arthritis.

Authors:  Adrià Aterido; Juan D Cañete; Jesús Tornero; Francisco Blanco; Benjamín Fernández-Gutierrez; Carolina Pérez; Mercedes Alperi-López; Alex Olivè; Héctor Corominas; Víctor Martínez-Taboada; Isidoro González; Antonio Fernández-Nebro; Alba Erra; María López-Lasanta; Mireia López Corbeto; Núria Palau; Sara Marsal; Antonio Julià
Journal:  Front Immunol       Date:  2019-07-02       Impact factor: 7.561

9.  A longitudinal genome-wide association study of anti-tumor necrosis factor response among Japanese patients with rheumatoid arthritis.

Authors:  Kyoko Honne; Ingileif Hallgrímsdóttir; Chunsen Wu; Ronnie Sebro; Nicholas P Jewell; Takeo Sakurai; Masahiro Iwamoto; Seiji Minota; Damini Jawaheer
Journal:  Arthritis Res Ther       Date:  2016-01-18       Impact factor: 5.156

10.  Previously reported PDE3A-SLCO1C1 genetic variant does not correlate with anti-TNF response in a large UK rheumatoid arthritis cohort.

Authors:  Samantha Louise Smith; Darren Plant; Xiu Hue Lee; Jonathan Massey; Kimme Hyrich; Ann W Morgan; Anthony G Wilson; John Isaacs; Anne Barton
Journal:  Pharmacogenomics       Date:  2016-05-16       Impact factor: 2.533

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