Literature DB >> 25895078

Crowdtruth validation: a new paradigm for validating algorithms that rely on image correspondences.

Lena Maier-Hein1, Daniel Kondermann, Tobias Roß, Sven Mersmann, Eric Heim, Sebastian Bodenstedt, Hannes Götz Kenngott, Alexandro Sanchez, Martin Wagner, Anas Preukschas, Anna-Laura Wekerle, Stefanie Helfert, Keno März, Arianeb Mehrabi, Stefanie Speidel, Christian Stock.   

Abstract

PURPOSE: Feature tracking and 3D surface reconstruction are key enabling techniques to computer-assisted minimally invasive surgery. One of the major bottlenecks related to training and validation of new algorithms is the lack of large amounts of annotated images that fully capture the wide range of anatomical/scene variance in clinical practice. To address this issue, we propose a novel approach to obtaining large numbers of high-quality reference image annotations at low cost in an extremely short period of time.
METHODS: The concept is based on outsourcing the correspondence search to a crowd of anonymous users from an online community (crowdsourcing) and comprises four stages: (1) feature detection, (2) correspondence search via crowdsourcing, (3) merging multiple annotations per feature by fitting Gaussian finite mixture models, (4) outlier removal using the result of the clustering as input for a second annotation task.
RESULTS: On average, 10,000 annotations were obtained within 24 h at a cost of $100. The annotation of the crowd after clustering and before outlier removal was of expert quality with a median distance of about 1 pixel to a publically available reference annotation. The threshold for the outlier removal task directly determines the maximum annotation error, but also the number of points removed.
CONCLUSIONS: Our concept is a novel and effective method for fast, low-cost and highly accurate correspondence generation that could be adapted to various other applications related to large-scale data annotation in medical image computing and computer-assisted interventions.

Mesh:

Year:  2015        PMID: 25895078     DOI: 10.1007/s11548-015-1168-3

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  9 in total

1.  Distributed human intelligence for colonic polyp classification in computer-aided detection for CT colonography.

Authors:  Tan B Nguyen; Shijun Wang; Vishal Anugu; Natalie Rose; Matthew McKenna; Nicholas Petrick; Joseph E Burns; Ronald M Summers
Journal:  Radiology       Date:  2012-01-24       Impact factor: 11.105

Review 2.  Crowdsourcing--harnessing the masses to advance health and medicine, a systematic review.

Authors:  Benjamin L Ranard; Yoonhee P Ha; Zachary F Meisel; David A Asch; Shawndra S Hill; Lance B Becker; Anne K Seymour; Raina M Merchant
Journal:  J Gen Intern Med       Date:  2013-07-11       Impact factor: 5.128

3.  Crowdsourcing for reference correspondence generation in endoscopic images.

Authors:  Lena Maier-Hein; Sven Mersmann; Daniel Kondermann; Christian Stock; Hannes Gotz Kenngott; Alexandro Sanchez; Martin Wagner; Anas Preukschas; Anna-Laura Wekerle; Stefanie Helfert; Sebastian Bodenstedt; Stefanie Speidel
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

4.  Can masses of non-experts train highly accurate image classifiers? A crowdsourcing approach to instrument segmentation in laparoscopic images.

Authors:  Lena Maier-Hein; Sven Mersmann; Daniel Kondermann; Sebastian Bodenstedt; Alexandro Sanchez; Christian Stock; Hannes Gotz Kenngott; Mathias Eisenmann; Stefanie Speidel
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

5.  A comparative study of correspondence-search algorithms in MIS images.

Authors:  Gustavo A Puerto; Gian-Luca Mariottini
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

6.  Crowd-Sourced Assessment of Technical Skills: a novel method to evaluate surgical performance.

Authors:  Carolyn Chen; Lee White; Timothy Kowalewski; Rajesh Aggarwal; Chris Lintott; Bryan Comstock; Katie Kuksenok; Cecilia Aragon; Daniel Holst; Thomas Lendvay
Journal:  J Surg Res       Date:  2013-10-10       Impact factor: 2.192

7.  Comparative validation of single-shot optical techniques for laparoscopic 3-D surface reconstruction.

Authors:  L Maier-Hein; A Groch; A Bartoli; S Bodenstedt; G Boissonnat; P-L Chang; N T Clancy; D S Elson; S Haase; E Heim; J Hornegger; P Jannin; H Kenngott; T Kilgus; B Müller-Stich; D Oladokun; S Röhl; T R Dos Santos; H-P Schlemmer; A Seitel; S Speidel; M Wagner; D Stoyanov
Journal:  IEEE Trans Med Imaging       Date:  2014-05-23       Impact factor: 10.048

8.  Crystal structure of a monomeric retroviral protease solved by protein folding game players.

Authors:  Firas Khatib; Frank DiMaio; Seth Cooper; Maciej Kazmierczyk; Miroslaw Gilski; Szymon Krzywda; Helena Zabranska; Iva Pichova; James Thompson; Zoran Popović; Mariusz Jaskolski; David Baker
Journal:  Nat Struct Mol Biol       Date:  2011-09-18       Impact factor: 15.369

9.  Distributed medical image analysis and diagnosis through crowd-sourced games: a malaria case study.

Authors:  Sam Mavandadi; Stoyan Dimitrov; Steve Feng; Frank Yu; Uzair Sikora; Oguzhan Yaglidere; Swati Padmanabhan; Karin Nielsen; Aydogan Ozcan
Journal:  PLoS One       Date:  2012-05-11       Impact factor: 3.240

  9 in total
  5 in total

1.  Large-scale medical image annotation with crowd-powered algorithms.

Authors:  Eric Heim; Tobias Roß; Alexander Seitel; Keno März; Bram Stieltjes; Matthias Eisenmann; Johannes Lebert; Jasmin Metzger; Gregor Sommer; Alexander W Sauter; Fides Regina Schwartz; Andreas Termer; Felix Wagner; Hannes Götz Kenngott; Lena Maier-Hein
Journal:  J Med Imaging (Bellingham)       Date:  2018-09-08

2.  Crowdsourcing for error detection in cortical surface delineations.

Authors:  Melanie Ganz; Daniel Kondermann; Jonas Andrulis; Gitte Moos Knudsen; Lena Maier-Hein
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-06-27       Impact factor: 2.924

Review 3.  Crowdsourcing: an overview and applications to ophthalmology.

Authors:  Xueyang Wang; Lucy Mudie; Christopher J Brady
Journal:  Curr Opin Ophthalmol       Date:  2016-05       Impact factor: 3.761

Review 4.  Surgical data science - from concepts toward clinical translation.

Authors:  Lena Maier-Hein; Matthias Eisenmann; Duygu Sarikaya; Keno März; Toby Collins; Anand Malpani; Johannes Fallert; Hubertus Feussner; Stamatia Giannarou; Pietro Mascagni; Hirenkumar Nakawala; Adrian Park; Carla Pugh; Danail Stoyanov; Swaroop S Vedula; Kevin Cleary; Gabor Fichtinger; Germain Forestier; Bernard Gibaud; Teodor Grantcharov; Makoto Hashizume; Doreen Heckmann-Nötzel; Hannes G Kenngott; Ron Kikinis; Lars Mündermann; Nassir Navab; Sinan Onogur; Tobias Roß; Raphael Sznitman; Russell H Taylor; Minu D Tizabi; Martin Wagner; Gregory D Hager; Thomas Neumuth; Nicolas Padoy; Justin Collins; Ines Gockel; Jan Goedeke; Daniel A Hashimoto; Luc Joyeux; Kyle Lam; Daniel R Leff; Amin Madani; Hani J Marcus; Ozanan Meireles; Alexander Seitel; Dogu Teber; Frank Ückert; Beat P Müller-Stich; Pierre Jannin; Stefanie Speidel
Journal:  Med Image Anal       Date:  2021-11-18       Impact factor: 13.828

5.  Crawling the German Health Web: Exploratory Study and Graph Analysis.

Authors:  Richard Zowalla; Thomas Wetter; Daniel Pfeifer
Journal:  J Med Internet Res       Date:  2020-07-24       Impact factor: 5.428

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.