Literature DB >> 25879997

Alternative mechanisms for O2 release and O-O bond formation in the oxygen evolving complex of photosystem II.

Xichen Li1, Per E M Siegbahn.   

Abstract

In a previous detailed study of all the steps of water oxidation in photosystem II, it was surprisingly found that O2 release is as critical for the rate as O-O bond formation. A new mechanism for O2 release has now been found, which can be described as an opening followed by a closing of the interior of the oxygen evolving complex. A transition state for peroxide rotation forming a superoxide radical, missed in the previous study, and a structural change around the outside manganese are two key steps in the new mechanism. However, O2 release may still remain rate-limiting. Additionally, for the step forming the O-O bond, an alternative, experimentally suggested, mechanism was investigated. The new model calculations can rule out the precise use of that mechanism. However, a variant with a rotation of the ligands around the outer manganese by about 30° will give a low barrier, competitive with the old DFT mechanism. Both these mechanisms use an oxyl-oxo mechanism for O-O bond formation involving the same two manganese atoms and the central oxo group (O5).

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Year:  2015        PMID: 25879997     DOI: 10.1039/c5cp00138b

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  14 in total

1.  Theoretical study of the EPR spectrum of the S3TyrZ metalloradical intermediate state of the O2-evolving complex of photosystem II.

Authors:  Georgia Zahariou; Nikolaos Ioannidis
Journal:  Photosynth Res       Date:  2016-05-11       Impact factor: 3.573

2.  Structure of photosystem II and substrate binding at room temperature.

Authors:  Iris D Young; Mohamed Ibrahim; Ruchira Chatterjee; Sheraz Gul; Franklin Fuller; Sergey Koroidov; Aaron S Brewster; Rosalie Tran; Roberto Alonso-Mori; Thomas Kroll; Tara Michels-Clark; Hartawan Laksmono; Raymond G Sierra; Claudiu A Stan; Rana Hussein; Miao Zhang; Lacey Douthit; Markus Kubin; Casper de Lichtenberg; Pham Long Vo; Håkan Nilsson; Mun Hon Cheah; Dmitriy Shevela; Claudio Saracini; Mackenzie A Bean; Ina Seuffert; Dimosthenis Sokaras; Tsu-Chien Weng; Ernest Pastor; Clemens Weninger; Thomas Fransson; Louise Lassalle; Philipp Bräuer; Pierre Aller; Peter T Docker; Babak Andi; Allen M Orville; James M Glownia; Silke Nelson; Marcin Sikorski; Diling Zhu; Mark S Hunter; Thomas J Lane; Andy Aquila; Jason E Koglin; Joseph Robinson; Mengning Liang; Sébastien Boutet; Artem Y Lyubimov; Monarin Uervirojnangkoorn; Nigel W Moriarty; Dorothee Liebschner; Pavel V Afonine; David G Waterman; Gwyndaf Evans; Philippe Wernet; Holger Dobbek; William I Weis; Axel T Brunger; Petrus H Zwart; Paul D Adams; Athina Zouni; Johannes Messinger; Uwe Bergmann; Nicholas K Sauter; Jan Kern; Vittal K Yachandra; Junko Yano
Journal:  Nature       Date:  2016-11-21       Impact factor: 49.962

Review 3.  From manganese oxidation to water oxidation: assembly and evolution of the water-splitting complex in photosystem II.

Authors:  Nicholas Oliver; Anton P Avramov; Dennis J Nürnberg; Holger Dau; Robert L Burnap
Journal:  Photosynth Res       Date:  2022-04-09       Impact factor: 3.429

4.  Nucleophilic water attack is not a possible mechanism for O-O bond formation in photosystem II.

Authors:  Per E M Siegbahn
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-24       Impact factor: 11.205

5.  Manganese-Hydroxido Complexes Supported by a Urea/Phosphinic Amide Tripodal Ligand.

Authors:  Victoria F Oswald; Andrew C Weitz; Saborni Biswas; Joseph W Ziller; Michael P Hendrich; A S Borovik
Journal:  Inorg Chem       Date:  2018-10-09       Impact factor: 5.165

6.  Structural rearrangements preceding dioxygen formation by the water oxidation complex of photosystem II.

Authors:  Han Bao; Robert L Burnap
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-27       Impact factor: 11.205

7.  Mechanistic Parameters of Electrocatalytic Water Oxidation on LiMn2 O4 in Comparison to Natural Photosynthesis.

Authors:  Lennart Köhler; Majid Ebrahimizadeh Abrishami; Vladimir Roddatis; Janis Geppert; Marcel Risch
Journal:  ChemSusChem       Date:  2017-10-27       Impact factor: 8.928

8.  O2 evolution and recovery of the water-oxidizing enzyme.

Authors:  Keisuke Kawashima; Tomohiro Takaoka; Hiroki Kimura; Keisuke Saito; Hiroshi Ishikita
Journal:  Nat Commun       Date:  2018-03-28       Impact factor: 14.919

9.  Interaction of methanol with the oxygen-evolving complex: atomistic models, channel identification, species dependence, and mechanistic implications.

Authors:  Marius Retegan; Dimitrios A Pantazis
Journal:  Chem Sci       Date:  2016-07-05       Impact factor: 9.825

10.  Reactive oxygen species leave a damage trail that reveals water channels in Photosystem II.

Authors:  Daniel A Weisz; Michael L Gross; Himadri B Pakrasi
Journal:  Sci Adv       Date:  2017-11-17       Impact factor: 14.136

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