| Literature DB >> 25878808 |
Oscar F Vázquez-Vuelvas1, René A Enríquez-Figueroa1, Héctor García-Ortega2, Marcos Flores-Alamo2, Armando Pineda-Contreras1.
Abstract
The title chalcone derivative, C13H10O2, adopts an E conformation about the C=C double bond. The mol-ecule is composed of a furanyl and a phenyl ring, bridged by an α,β-unsaturated carbonyl system, which are inclined to one another by 24.07 (7)°. In the crystal, mol-ecules are connected by weak C-H⋯O hydrogen bonds involving the carbonyl O atom acting as a trifurcated acceptor and C-H⋯π inter-actions, forming ribbons extending along the c-axis direction.Entities:
Keywords: Claisen–Schmidt reaction; biological activity; chalcone derivative; crystal structure; hydrogen bonding; zigzag fashion.
Year: 2015 PMID: 25878808 PMCID: PMC4384596 DOI: 10.1107/S205698901500047X
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level.
Hydrogen-bond geometry (, )
Cg1 and Cg2 are the centroids of the O1/C10C13 furanyl ring and the C1C6 phenyl ring, respectively.
|
|
| H |
|
|
|---|---|---|---|---|
| C3H3O2i | 0.95 | 2.51 | 3.457(2) | 151 |
| C9H9O2ii | 0.95 | 2.62 | 3.416(1) | 142 |
| C11H11O2ii | 0.95 | 2.51 | 3.277(2) | 138 |
| C6H6 | 0.95 | 2.88 | 3.687(2) | 144 |
| C13H13 | 0.95 | 2.71 | 3.519(9) | 143 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .
Figure 2A partial packing diagram of the title compound, showing the hydrogen-bonded supramolecular assembly via C—H⋯O interactions (blue dashed lines).
Figure 3A partial packing diagram of the title compound, showing the C—H⋯π stacking interactions, depicted as blue and purple dotted lines for the C6—H6⋯Cg1 and C13—H13⋯Cg2 contacts, respectively. H atoms not involved in hydrogen-bonding interactions have been omitted for clarity.
Experimental details
| Crystal data | |
| Chemical formula | C13H10O2 |
|
| 198.21 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 130 |
|
| 9.5296(7), 10.1383(7), 11.1595(7) |
| () | 103.922(6) |
|
| 1046.49(13) |
|
| 4 |
| Radiation type | Mo |
| (mm1) | 0.08 |
| Crystal size (mm) | 0.50 0.45 0.32 |
| Data collection | |
| Diffractometer | Agilent Xcalibur Atlas Gemini |
| Absorption correction | Multi-scan ( |
|
| 0.781, 1 |
| No. of measured, independent and observed [ | 8114, 2553, 1755 |
|
| 0.019 |
| (sin /)max (1) | 0.691 |
| Refinement | |
|
| 0.045, 0.115, 1.04 |
| No. of reflections | 2553 |
| No. of parameters | 136 |
| H-atom treatment | H-atom parameters constrained |
| max, min (e 3) | 0.11, 0.17 |
Computer programs: CrysAlis PRO (Agilent, 2011 ▸), SHELXS2013 and SHELXL2013 (Sheldrick, 2008 ▸, 2015 ▸), ORTEP-3 for Windows and WinGX (Farrugia, 2012 ▸), Mercury (Macrae et al., 2006 ▸) and DIAMOND (Brandenburg, 2012 ▸).
| C13H10O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2252 reflections |
| θ = 3.8–29.4° | |
| µ = 0.08 mm−1 | |
| β = 103.922 (6)° | Prism, colorless |
| 0.50 × 0.45 × 0.32 mm | |
| Agilent Xcalibur Atlas Gemini diffractometer | 2553 independent reflections |
| Graphite monochromator | 1755 reflections with |
| Detector resolution: 10.4685 pixels mm-1 | |
| ω scans | θmax = 29.4°, θmin = 3.8° |
| Absorption correction: multi-scan ( | |
| 8114 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 2553 reflections | Δρmax = 0.11 e Å−3 |
| 136 parameters | Δρmin = −0.17 e Å−3 |
| Experimental. Absorption correction: CrysAlisPro, Agilent Technologies (Agilent, 2011) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| O1 | 0.96039 (10) | 0.15914 (10) | 0.09922 (8) | 0.0619 (3) | |
| C1 | 0.65936 (13) | −0.05129 (13) | 0.39220 (11) | 0.0465 (3) | |
| O2 | 0.50969 (10) | −0.03589 (12) | 0.19207 (8) | 0.0724 (3) | |
| C7 | 0.62831 (14) | −0.01269 (13) | 0.25976 (11) | 0.0499 (3) | |
| C9 | 0.72460 (14) | 0.06998 (13) | 0.09060 (12) | 0.0498 (3) | |
| H9 | 0.6322 | 0.049 | 0.0396 | 0.06* | |
| C8 | 0.74268 (14) | 0.04814 (14) | 0.21095 (11) | 0.0516 (3) | |
| H8 | 0.8312 | 0.0724 | 0.2662 | 0.062* | |
| C10 | 0.82803 (14) | 0.12119 (13) | 0.02963 (11) | 0.0477 (3) | |
| C11 | 0.82469 (15) | 0.13668 (14) | −0.09089 (12) | 0.0549 (3) | |
| H11 | 0.7452 | 0.1182 | −0.1585 | 0.066* | |
| C6 | 0.76975 (15) | 0.00494 (14) | 0.48148 (12) | 0.0551 (4) | |
| H6 | 0.8309 | 0.0694 | 0.4587 | 0.066* | |
| C12 | 0.96066 (16) | 0.18535 (14) | −0.09817 (13) | 0.0587 (4) | |
| H12 | 0.991 | 0.2057 | −0.1711 | 0.07* | |
| C2 | 0.57275 (16) | −0.14617 (15) | 0.42759 (13) | 0.0605 (4) | |
| H2 | 0.4966 | −0.1857 | 0.3675 | 0.073* | |
| C13 | 1.03802 (17) | 0.19718 (16) | 0.01731 (14) | 0.0649 (4) | |
| H13 | 1.1349 | 0.2281 | 0.0399 | 0.078* | |
| C5 | 0.79115 (17) | −0.03262 (17) | 0.60379 (13) | 0.0674 (4) | |
| H5 | 0.8662 | 0.0069 | 0.6649 | 0.081* | |
| C4 | 0.70484 (19) | −0.12620 (19) | 0.63691 (15) | 0.0745 (5) | |
| H4 | 0.72 | −0.1517 | 0.721 | 0.089* | |
| C3 | 0.59661 (19) | −0.18335 (18) | 0.54951 (16) | 0.0740 (5) | |
| H3 | 0.5375 | −0.2492 | 0.573 | 0.089* |
| O1 | 0.0544 (6) | 0.0759 (7) | 0.0512 (5) | −0.0135 (5) | 0.0044 (4) | 0.0031 (5) |
| C1 | 0.0452 (7) | 0.0491 (7) | 0.0454 (7) | 0.0025 (5) | 0.0115 (5) | −0.0024 (5) |
| O2 | 0.0504 (6) | 0.1151 (9) | 0.0482 (6) | −0.0173 (6) | 0.0049 (4) | −0.0038 (6) |
| C7 | 0.0457 (7) | 0.0577 (8) | 0.0448 (7) | −0.0021 (6) | 0.0080 (5) | −0.0071 (6) |
| C9 | 0.0469 (7) | 0.0538 (8) | 0.0471 (7) | −0.0012 (6) | 0.0085 (5) | −0.0031 (6) |
| C8 | 0.0476 (7) | 0.0602 (8) | 0.0455 (7) | −0.0060 (6) | 0.0081 (5) | −0.0030 (6) |
| C10 | 0.0470 (7) | 0.0475 (7) | 0.0468 (7) | −0.0015 (5) | 0.0078 (5) | −0.0010 (5) |
| C11 | 0.0556 (8) | 0.0610 (8) | 0.0473 (7) | −0.0025 (7) | 0.0110 (6) | −0.0014 (6) |
| C6 | 0.0585 (8) | 0.0595 (8) | 0.0467 (7) | −0.0017 (6) | 0.0113 (6) | −0.0054 (6) |
| C12 | 0.0610 (9) | 0.0609 (9) | 0.0582 (8) | 0.0001 (7) | 0.0217 (7) | 0.0050 (7) |
| C2 | 0.0546 (8) | 0.0661 (9) | 0.0605 (9) | −0.0038 (7) | 0.0129 (6) | 0.0034 (7) |
| C13 | 0.0533 (8) | 0.0721 (10) | 0.0702 (10) | −0.0104 (7) | 0.0164 (7) | 0.0086 (8) |
| C5 | 0.0675 (10) | 0.0847 (11) | 0.0461 (8) | 0.0074 (8) | 0.0060 (7) | −0.0061 (8) |
| C4 | 0.0788 (11) | 0.0943 (13) | 0.0523 (9) | 0.0182 (10) | 0.0193 (8) | 0.0168 (9) |
| C3 | 0.0742 (11) | 0.0777 (11) | 0.0742 (11) | 0.0007 (8) | 0.0256 (9) | 0.0199 (9) |
| O1—C13 | 1.3627 (17) | C11—H11 | 0.95 |
| O1—C10 | 1.3678 (15) | C6—C5 | 1.3840 (19) |
| C1—C2 | 1.3855 (19) | C6—H6 | 0.95 |
| C1—C6 | 1.3857 (18) | C12—C13 | 1.327 (2) |
| C1—C7 | 1.4882 (17) | C12—H12 | 0.95 |
| O2—C7 | 1.2218 (15) | C2—C3 | 1.377 (2) |
| C7—C8 | 1.4664 (18) | C2—H2 | 0.95 |
| C9—C8 | 1.3308 (17) | C13—H13 | 0.95 |
| C9—C10 | 1.4236 (18) | C5—C4 | 1.364 (2) |
| C9—H9 | 0.95 | C5—H5 | 0.95 |
| C8—H8 | 0.95 | C4—C3 | 1.366 (2) |
| C10—C11 | 1.3468 (18) | C4—H4 | 0.95 |
| C11—C12 | 1.407 (2) | C3—H3 | 0.95 |
| C13—O1—C10 | 105.91 (10) | C5—C6—H6 | 119.9 |
| C2—C1—C6 | 118.81 (12) | C1—C6—H6 | 119.9 |
| C2—C1—C7 | 118.43 (11) | C13—C12—C11 | 106.25 (13) |
| C6—C1—C7 | 122.76 (12) | C13—C12—H12 | 126.9 |
| O2—C7—C8 | 120.74 (12) | C11—C12—H12 | 126.9 |
| O2—C7—C1 | 119.78 (12) | C3—C2—C1 | 120.25 (14) |
| C8—C7—C1 | 119.44 (11) | C3—C2—H2 | 119.9 |
| C8—C9—C10 | 127.34 (12) | C1—C2—H2 | 119.9 |
| C8—C9—H9 | 116.3 | C12—C13—O1 | 111.18 (13) |
| C10—C9—H9 | 116.3 | C12—C13—H13 | 124.4 |
| C9—C8—C7 | 121.16 (12) | O1—C13—H13 | 124.4 |
| C9—C8—H8 | 119.4 | C4—C5—C6 | 120.22 (15) |
| C7—C8—H8 | 119.4 | C4—C5—H5 | 119.9 |
| C11—C10—O1 | 109.34 (12) | C6—C5—H5 | 119.9 |
| C11—C10—C9 | 131.84 (12) | C5—C4—C3 | 120.17 (14) |
| O1—C10—C9 | 118.76 (11) | C5—C4—H4 | 119.9 |
| C10—C11—C12 | 107.32 (12) | C3—C4—H4 | 119.9 |
| C10—C11—H11 | 126.3 | C4—C3—C2 | 120.40 (16) |
| C12—C11—H11 | 126.3 | C4—C3—H3 | 119.8 |
| C5—C6—C1 | 120.15 (14) | C2—C3—H3 | 119.8 |
| C2—C1—C7—O2 | 19.4 (2) | C9—C10—C11—C12 | −176.65 (14) |
| C6—C1—C7—O2 | −159.66 (14) | C2—C1—C6—C5 | −0.7 (2) |
| C2—C1—C7—C8 | −158.15 (13) | C7—C1—C6—C5 | 178.37 (13) |
| C6—C1—C7—C8 | 22.74 (19) | C10—C11—C12—C13 | −0.29 (17) |
| C10—C9—C8—C7 | −176.31 (13) | C6—C1—C2—C3 | 0.0 (2) |
| O2—C7—C8—C9 | −5.4 (2) | C7—C1—C2—C3 | −179.11 (14) |
| C1—C7—C8—C9 | 172.14 (12) | C11—C12—C13—O1 | −0.03 (18) |
| C13—O1—C10—C11 | −0.50 (16) | C10—O1—C13—C12 | 0.33 (17) |
| C13—O1—C10—C9 | 177.07 (12) | C1—C6—C5—C4 | 0.8 (2) |
| C8—C9—C10—C11 | 173.72 (14) | C6—C5—C4—C3 | −0.1 (2) |
| C8—C9—C10—O1 | −3.2 (2) | C5—C4—C3—C2 | −0.7 (3) |
| O1—C10—C11—C12 | 0.49 (16) | C1—C2—C3—C4 | 0.7 (3) |
| H··· | ||||
| C3—H3···O2i | 0.95 | 2.51 | 3.457 (2) | 151 |
| C9—H9···O2ii | 0.95 | 2.62 | 3.416 (1) | 142 |
| C11—H11···O2ii | 0.95 | 2.51 | 3.277 (2) | 138 |
| C6—H6··· | 0.95 | 2.88 | 3.687 (2) | 144 |
| C13—H13··· | 0.95 | 2.71 | 3.519 (9) | 143 |