| Literature DB >> 25866490 |
Carlo De Pieri1, Josef Vuch2, Eleonora De Martino1, Anna M Bianco1, Luca Ronfani1, Emmanouil Athanasakis1, Barbara Bortot1, Sergio Crovella3, Andrea Taddio3, Giovanni M Severini1, Alberto Tommasini1.
Abstract
BACKGROUND: Periodic fever syndromes (PFS) are an emerging group of autoinflammatory disorders. Clinical overlap exists and multiple genetic analyses may be needed to assist diagnosis. We evaluated the diagnostic value of a 5-gene sequencing panel (5GP) in patients with undiagnosed PFS.Entities:
Keywords: Auto-inflammatory diseases; Genetics; Periodic fever syndromes
Mesh:
Substances:
Year: 2015 PMID: 25866490 PMCID: PMC4393620 DOI: 10.1186/s12969-015-0006-z
Source DB: PubMed Journal: Pediatr Rheumatol Online J ISSN: 1546-0096 Impact factor: 3.054
Figure 1Patients who underwent the analysis of the 5 HPF- related genes.
Main clinical features in patients with uncertain genetic results
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| Yes | 7/19 (36.8) | 0.2 (0.04-0.9) | 0.03 |
| No | 10/13 (76.9) | ||
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| Yes | 9/21 (42.9) | 0.3 (0.1-1.1) | 0.06 |
| No | 15/21 (71.4) | ||
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| Yes | 19/29 (65.5) | 3.0 (0.8-11.8) | 0.1 |
| No | 5/13 (38.5) | ||
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| Yes | 11/22 (50.0) | 0.5 (0.2-1.9) | 0.3 |
| No | 13/20 (65.0) | ||
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| Yes | 14/22 (63.6) | 1.8 (0.5-6.0) | 0.4 |
| No | 10/20 (50.0) | ||
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| Yes | 2/6 (33.3) | 0.3 (0.1-2.0) | 0.4f |
| No | 22/36 (61.1) | ||
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| Yes | 7/14 (50.0) | 0.6 (0.2-2.4) | 0.5 |
| No | 17/28 (60.7) | ||
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| Yes | 3/4 (75.0) | 2.4 (0.2-25.5) | 0.6f |
| No | 21/38 (55.3) | ||
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| Yes | 3/5 (60.0) | 1.1 (0.1-11.6) | 1.0f |
| No | 4/7 (57.1) | ||
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| Yes | 3/6 (50.0) | 0.7 (0.1-4.0) | 1.0f |
| No | 21/36 (58.3) |
#Available for 32 subjects receiving corticosteroids.
fFisher exact test.
*Available for 12 subjects receiving colchicine.
Figure 2Descriptive differences between all the genotype subset. Legend: MU: multiple uncertain, SU: single uncertain, Hz: heterozygous, SNP: single nucleotide polymorphism.
Genotypes and interpretation of patients with uncertain genetic results
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| 1 | NLRP12/NM_144687.2 | rs141245482/c.910C > T H304Y | < 0.01 | Single mutations of uncertain significance |
| 2 | NLRP3/NM_001079821.2 | rs142651552/c.2024G > A Q705K | ||
| 3 | NLRP12/NM_144687.2 | rs34971363/c.1206C > G; F402L | 0.03 | |
| 4 | NLRP12/NM_144687.2 | rs34971363/c.1206C > G; F402L | 0.03 | |
| 5 | NLRP12/NM_144687.2 | rs34971363/c.1206C > G; F402L | 0.03 | |
| 6 | NLRP3/NM_001079821.2 | rs142651552/c.2024G > A Q705K | ||
| 7 | TNFRS1A/NM_001065.3 | rs4149584/c.362G > A; R121Q | 0.01 | |
| 8 | NLRP12/NM_144687.2 | rs34971363/c.1206C > G; F402L | 0.03 | |
| 9 | NLRP12/NM_144687.2 | rs34971363/c.1206C > G; F402L | 0.03 | |
| 10 | NLRP12/NM_144687.2 | rs34971363F/c.1206C > G; F402L | 0.03 | |
| 11 | TNFRS1A/NM_001065.3 | rs4149584/c.362G > A; R121Q | 0.01 | |
| 1 | MEFV/NM_000243.2 | rs224222/c.602G > A; R202Q | 0.17 | Multiple mutations of uncertain significance |
| MEFV/NM_000243.2 | rs224222/c.602G > A; R202Q* | 0.17 | ||
| 2 | MVK/NM_000431.2 | rs7957619/c. 155G > A S52N |
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| MVK/NM_000431.2 | rs7957619/c. 155G > A S52N |
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| 3 | NLRP12/NM_144687.2 | rs34971363/c.1206C > G; F402L | 0.03 | |
| NLRP3/NM_001079821.2 | rs142651552/c.2024G > A; Q705K | NA | ||
| MEFV/NM_000243.2 | rs224222/c.602G > A; R202Q | 0.17 | ||
| MVK/NM_000431.2 | rs7957619/c. 155G > A S52N | 0.09 | ||
| 4 | NLRP12/NM_144687.2 | rs34971363/c.1206C > G; F402L | 0.03 | |
| MEFV/NM_000243.2 | rs224222/c.602G > A R202Q | 0.17 | ||
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| NLRP3/NM_001079821.2 | rs142651552/c.2024G > A Q705K | 0.17 | |
| MEFV/NM_000243.2 | rs224222/c.602G > A R202Q | |||
| 6 | NLRP3/NM_001079821.2 | rs142651552/c.2024G > A Q705K | 0.02 | |
| MEFV/NM_000243.2 | rs11466023/c.1105C > T; P369S | 0.02 | ||
| MEFV/NM_000243.2 | rs11466024/c.1223G > A; R408Q | |||
| 1 | MEFV/NM_000243.2 | rs61732874/c.2230G > T; A744S | <0.01 | Heterozygous mutations associated with autosomal recessive disorders |
| 2 | MEFV/NM_000243.2 | rs3743930/c.442G > C E148Q | 0.08 | |
| 3 | MEFV/NM_000243.2 | rs11466045/c.1772T > C; I591T | 0.01 | |
| 4 | MEFV/NM_000243.2 | rs224222/c.602G > A R202Q | 0.17 | |
| MEFV/NM_000243.2 | rs61752717/c.2080A > G M694V | 0.09 | ||
| MVK/NM_000431.2 | rs7957619/c. 155G > A S52N | |||
| 5 | MEFV/NM_000243.2 | rs3743930/c.442G > C E148Q | 0.08 | |
| MEFV/NM_000243.2 | rs224222/c.602G > A R202Q | 0.17 | ||
| 6 | NLRP12/NM_144687.2 | rs34436714 c.116G > T; | 0.25 | |
| MVK/NM_000431.2 | rs28934897 c.1129G > A V377I | |||
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| MEFV/NM_000243.2 | rs224222/c.602G > A R202Q | 0.17 | |
| MVK/NM_000431.2 | rs28934897 c.1129G > A V377I |
*Although hetherozygous R202Q variant in MEFV is considered a common polymorphism not to be reported, the same variant in homozygosis has been associated to cases of Familial Mediterranean Fever in Greece [32].
Figure 3Clinical differences according to genetic results. Legend: MU: multiple uncertain, SU: single uncertain, Hz: heterozygous, SNP: single nucleotide polymorphism.