Literature DB >> 25862746

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Shidong Jia1, Liangxuan Zhang1, Gary J Latham2.   

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Year:  2015        PMID： 25862746      PMCID： PMC4425382          DOI： 10.1634/theoncologist.2014-0357

Source DB:  PubMed          Journal:  Oncologist        ISSN： 1083-7159


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  7 in total

1.  Semiconductor-based sequencing of formalin-fixed, paraffin-embedded colorectal cancer samples.

Authors:  Albrecht Stenzinger; Nicole Pfarr; Roland Penzel; Thomas Wolf; Peter Schirmacher; Volker Endris; Wilko Weichert
Journal:  Oncologist       Date:  2015-04-10

2.  Cytosine deamination is a major cause of baseline noise in next-generation sequencing.

Authors:  Guoli Chen; Stacy Mosier; Christopher D Gocke; Ming-Tseh Lin; James R Eshleman
Journal:  Mol Diagn Ther       Date:  2014-10       Impact factor: 4.074

3.  High-throughput detection of clinically relevant mutations in archived tumor samples by multiplexed PCR and next-generation sequencing.

Authors:  Richard Bourgon; Shan Lu; Yibing Yan; Mark R Lackner; Weiru Wang; Victor Weigman; David Wang; Yinghui Guan; Lisa Ryner; Hartmut Koeppen; Rajesh Patel; Garret M Hampton; Lukas C Amler; Yulei Wang
Journal:  Clin Cancer Res       Date:  2014-02-26       Impact factor: 12.531

4.  False positives in multiplex PCR-based next-generation sequencing have unique signatures.

Authors:  Chad M McCall; Stacy Mosier; Michele Thiess; Marija Debeljak; Aparna Pallavajjala; Katie Beierl; Kristen L Deak; Michael B Datto; Christopher D Gocke; Ming-Tseh Lin; James R Eshleman
Journal:  J Mol Diagn       Date:  2014-07-11       Impact factor: 5.568

5.  Reducing sequence artifacts in amplicon-based massively parallel sequencing of formalin-fixed paraffin-embedded DNA by enzymatic depletion of uracil-containing templates.

Authors:  Hongdo Do; Stephen Q Wong; Jason Li; Alexander Dobrovic
Journal:  Clin Chem       Date:  2013-05-06       Impact factor: 8.327

6.  Profiling cancer gene mutations in clinical formalin-fixed, paraffin-embedded colorectal tumor specimens using targeted next-generation sequencing.

Authors:  Liangxuan Zhang; Liangjing Chen; Sachin Sah; Gary J Latham; Rajesh Patel; Qinghua Song; Hartmut Koeppen; Rachel Tam; Erica Schleifman; Haider Mashhedi; Sreedevi Chalasani; Ling Fu; Teiko Sumiyoshi; Rajiv Raja; William Forrest; Garret M Hampton; Mark R Lackner; Priti Hegde; Shidong Jia
Journal:  Oncologist       Date:  2014-03-24

7.  Functional DNA quantification guides accurate next-generation sequencing mutation detection in formalin-fixed, paraffin-embedded tumor biopsies.

Authors:  Sachin Sah; Liangjing Chen; Jeffrey Houghton; Jon Kemppainen; Adam C Marko; Robert Zeigler; Gary J Latham
Journal:  Genome Med       Date:  2013-08-30       Impact factor: 11.117
  7 in total

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