Literature DB >> 25851587

A cohesin-OCT4 complex mediates Sox enhancers to prime an early embryonic lineage.

Nesrine Abboud1, Thomas Moore- Morris2, Emilye Hiriart1,2, Henry Yang3, Hudson Bezerra1, Maria-Giovanna Gualazzi1, Sonia Stefanovic1,2, Anne-Claire Guénantin1, Sylvia M Evans4, Michel Pucéat1,2.   

Abstract

Short- and long-scales intra- and inter-chromosomal interactions are linked to gene transcription, but the molecular events underlying these structures and how they affect cell fate decision during embryonic development are poorly understood. One of the first embryonic cell fate decisions (that is, mesendoderm determination) is driven by the POU factor OCT4, acting in concert with the high-mobility group genes Sox-2 and Sox-17. Here we report a chromatin-remodelling mechanism and enhancer function that mediate cell fate switching. OCT4 alters the higher-order chromatin structure at both Sox-2 and Sox-17 loci. OCT4 titrates out cohesin and switches the Sox-17 enhancer from a locked (within an inter-chromosomal Sox-2 enhancer/CCCTC-binding factor CTCF/cohesin loop) to an active (within an intra-chromosomal Sox-17 promoter/enhancer/cohesin loop) state. SALL4 concomitantly mobilizes the polycomb complexes at the Soxs loci. Thus, OCT4/SALL4-driven cohesin- and polycombs-mediated changes in higher-order chromatin structure mediate instruction of early cell fate in embryonic cells.

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Year:  2015        PMID: 25851587      PMCID: PMC5531045          DOI: 10.1038/ncomms7749

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  64 in total

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Journal:  Dev Dyn       Date:  2008-02       Impact factor: 3.780

Review 3.  Developmental cell lineage.

Authors:  G S Stent
Journal:  Int J Dev Biol       Date:  1998       Impact factor: 2.203

4.  Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells.

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-13       Impact factor: 11.205

5.  Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development.

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7.  Analysis of long-range chromatin interactions using Chromosome Conformation Capture.

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Review 8.  Modification of enhancer chromatin: what, how, and why?

Authors:  Eliezer Calo; Joanna Wysocka
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10.  Three-dimensional maps of all chromosomes in human male fibroblast nuclei and prometaphase rosettes.

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  12 in total

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2.  Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

Authors:  Giorgio Oliviero; Gerard L Brien; Ariane Waston; Gundula Streubel; Emilia Jerman; Darrell Andrews; Benjamin Doyle; Nayla Munawar; Kieran Wynne; John Crean; Adrian P Bracken; Gerard Cagney
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Review 3.  SALL4, the missing link between stem cells, development and cancer.

Authors:  Hiro Tatetsu; Nikki R Kong; Gao Chong; Giovanni Amabile; Daniel G Tenen; Li Chai
Journal:  Gene       Date:  2016-02-16       Impact factor: 3.688

4.  The expanding phenotypes of cohesinopathies: one ring to rule them all!

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Review 5.  Transcription factors and 3D genome conformation in cell-fate decisions.

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Journal:  Nature       Date:  2019-05-15       Impact factor: 49.962

6.  IRX3/5 regulate mitotic chromatid segregation and limb bud shape.

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Journal:  Development       Date:  2020-10-05       Impact factor: 6.862

Review 7.  Chromatin Dynamics in Lineage Commitment and Cellular Reprogramming.

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8.  DNA N6-methyladenine is dynamically regulated in the mouse brain following environmental stress.

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9.  SALL4 promotes the tumorigenicity of cervical cancer cells through activation of the Wnt/β-catenin pathway via CTNNB1.

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10.  Quantitative imaging reveals real-time Pou5f3-Nanog complexes driving dorsoventral mesendoderm patterning in zebrafish.

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Journal:  Elife       Date:  2016-09-29       Impact factor: 8.140

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