| Literature DB >> 25848215 |
Ying Li1, Min Zhu1, Xiaoju Zhang1, Dongjun Cheng1, Xitao Ma1.
Abstract
Death-associated protein kinase 1 (DAPK) is an important serine/threonine kinase involved in various cellular processes, including apoptosis, autophagy, and inflammation. DAPK expression and activity are deregulated in a variety of diseases including cancer. Methylation of the DAPK gene is common in many types of cancer and can lead to loss of DAPK expression. However, the association between DAPK promoter hypermethylation and the clinicopathological significance of lung cancer remains unclear. In this study, we searched the MEDLINE, PubMed, Web of Science, and Scopus databases, systematically investigated the studies of DAPK promoter hypermethylation in lung cancer and quantified the association between DAPK promoter hypermethylation and its clinicopathological significance by meta-analysis. We observed that the frequency of DAPK methylation was significantly higher in lung cancer than in non-malignant lung tissues (odds ratio 6.02, 95% confidence interval 3.17-11.42, P<0.00001). The pooled results also showed the presence of a prognostic impact of DAPK gene methylation in lung cancer patients (odds ratio 3.63, 95% confidence interval 1.09-12.06, P=0.04). In addition, we summarized these findings and discuss tumor suppressor function, clinicopathological significance, and potential drug targeting of DAPK in lung cancer.Entities:
Keywords: DAPK; adenocarcinoma; death-associated protein kinase gene; lung; meta-analysis; methylation; non-small cell lung cancer; squamous cell carcinoma
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Year: 2015 PMID: 25848215 PMCID: PMC4378294 DOI: 10.2147/DDDT.S78012
Source DB: PubMed Journal: Drug Des Devel Ther ISSN: 1177-8881 Impact factor: 4.162
Figure 1Flow chart of study selection.
Basic characteristics of the included studies
| Study (country) | Patients (samples) | Methods | Primary aim | Methylation site |
|---|---|---|---|---|
| Tang et al | 135/tissue | MSP | Promoter, CpG islands | |
| Kim et al | 185/tissue | MSP | Associations of tobacco carcinogen and asbestos as well as demographic and clinical factors with | Promoter, CpG islands |
| Toyooka et al | 38/tissue, 15/control | MSP | A new methodology development with gene silencing in lung cancers | Promoter, CpG islands |
| Yanagawa et al | 75/tissue paired with 75/non-neoplastic lung tissue | MSP | Clinicopathological significance of gene hypermethylation in NSCLC | Promoter, CpG islands |
| Guo et al | 20/tissue, 20/non-neoplastic lung tissue | MSP | DNA hypermethylation at bronchial margins as early epigenetic events in the primary tumor | Promoter, CpG islands |
| Kim et al | 61/tissue, 61/non-neoplastic lung tissue | MSP | Role of DNA hypermethylation in prediction of clinical outcomes in primary NSCLC | Promoter, CpG islands |
| Kim et al | 72/tissue, 72/non-neoplastic lung tissue | MSP | Role of methylation status in prediction of long-term survival in lung cancer | Promoter, CpG islands |
| Russo et al | 49/tissue, 49/non-neoplastic lung tissue | MSP | Pattern of gene methylation status at distinct stages of NSCLC as early diagnostic and therapeutic markers | Promoter, CpG islands |
| Safar et al | 31/tissue, 31/non-neoplastic lung tissue | MSP | Prognostic potential of multigene hypermethylation profiling in NSCLC | Promoter, CpG islands |
| Vallbohmer et al | 91/tissue, 91/non-neoplastic lung tissue | MSP | Role and prognosis of multiple genes in NSCLC | Promoter, CpG islands |
| Shivapurkar et al | 40/tissue, 40/non-neoplastic lung tissue | MSP | A methylation gene panel in lung cancers | Promoter, CpG islands |
| Yanagawa et al | 101/tissue, 101/non-neoplastic lung tissue | MSP | TSG methylation status and the clinicopathologic characteristics | Promoter, CpG islands |
| Feng et al | 49/tissue, 49/non-neoplastic lung tissue | MethyLight assays | Comparison of DNA methylation (cancerous versus noncancerous) in NSCLC by MethyLight assays | Promoter, CpG islands |
| Wang et al | 28/tissue, 12/nonmalignant tissue | Three-dimensional polyacrylamide gel microarray coupled with linker-PCR | DNA hypermethylation of multiple genes in NSCLC using a three-dimensional polyacrylamide gel microarray | Promoter, CpG islands |
| Niklinska et al | 70/tissue | MSP | Role of | Promoter, CpG islands |
| Peng et al | 82/tissue | MSP | Aberrant hypermethylation of | Promoter, CpG islands |
| Zhang et al | 78/tissue, 78/non-neoplastic lung tissue | MSP | Methylation profiles of NSCLC in the Chinese population | Promoter, CpG islands |
| Kontic et al | 65/tissue | Bisulfite pyrosequencing | Associations between DNA methylation and clinicopathological features | Promoter, CpG islands |
Abbreviations: NSCLC, non-small cell lung cancer; tissue, lung tissue; MSP, methylation-specific PCR; PCR, polymerase chain reaction; TSG, tumor suppressor gene.
Figure 2The included studies investigated DAPK methylation status between 733 lung cancer patients and 694 nonmalignant controls with the pooled odds ratio being 6.02 (95% CI 3.17–11.42, Z=5.50, P<0.00001).
Abbreviations: CI, confidence interval; M–H, Mantel–Haenszel test.
Figure 3The included studies investigated DAPK methylation status between 401 tumors of adenocarcinoma and 263 of squamous carcinomas. The combined odds ratio was 0.91 (95% CI 0.64–1.29, Z=0.54, P=0.59).
Abbreviations: CI, confidence interval; M–H, Mantel–Haenszel test.
Figure 4Pooled results of methylation analysis of DAPK gene in different disease stages (TNM I + II versus TNM III + IV) in lung cancer. The pooled odds ratio is 0.95, 95% CI 0.53–1.73, Z=0.16, P=0.88).
Abbreviations: CI, confidence interval; M–H, Mantel–Haenszel test; TNM, tumor node metastasis staging system.
Figure 5All three included studies estimated the relationship between overall survival and DAPK methylation. The pooled hazard ratio for overall survival showed that DAPK hypermethylation was associated with worse survival in lung cancer (hazard ratio 3.63, 95% CI 1.09–12.06, P=0.04).
Abbreviations: CI, confidence interval; IV, inverse variance; SE, standard error.
Figure 6Funnel plot of publication bias in the meta-analysis of DAPK hypermethylation and clinicopathological features.
Notes: DAPK methylation in lung cancer (A), subtypes of histology (B), disease stages, TNM I + II versus III + IV (C), and overall survival (D). The x axis indicates the value of OR or HR and the y axis gives the SE multiplied by log scale of OR or HR.
Abbreviations: HR, hazard ratio; OR, odds ratio; SE, standard error; TNM, tumor node metastasis staging system.