Literature DB >> 25847440

Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.

Robert Duran1,2, Patricia Bonin3, Ronan Jezequel4, Karine Dubosc4, Claire Gassie5, Fanny Terrisse5, Justine Abella5, Christine Cagnon5, Cecile Militon3, Valérie Michotey3, Franck Gilbert6,7, Philippe Cuny3, Cristiana Cravo-Laureau5.   

Abstract

The present study aimed to examine whether the physical reworking of sediments by harrowing would be suitable for favouring the hydrocarbon degradation in coastal marine sediments. Mudflat sediments were maintained in mesocosms under conditions as closer as possible to those prevailing in natural environments with tidal cycles. Sediments were contaminated with Ural blend crude oil, and in half of them, harrowing treatment was applied in order to mimic physical reworking of surface sediments. Hydrocarbon distribution within the sediment and its removal was followed during 286 days. The harrowing treatment allowed hydrocarbon compounds to penetrate the first 6 cm of the sediments, and biodegradation indexes (such as n-C18/phytane) indicated that biodegradation started 90 days before that observed in untreated control mesocosms. However, the harrowing treatment had a severe impact on benthic organisms reducing drastically the macrofaunal abundance and diversity. In the harrowing-treated mesocosms, the bacterial abundance, determined by 16S rRNA gene Q-PCR, was slightly increased; and terminal restriction fragment length polymorphism (T-RFLP) analyses of 16S rRNA genes showed distinct and specific bacterial community structure. Co-occurrence network and canonical correspondence analyses (CCA) based on T-RFLP data indicated the main correlations between bacterial operational taxonomic units (OTUs) as well as the associations between OTUs and hydrocarbon compound contents further supported by clustered correlation (ClusCor) analysis. The analyses highlighted the OTUs constituting the network structural bases involved in hydrocarbon degradation. Negative correlations indicated the possible shifts in bacterial communities that occurred during the ecological succession.

Entities:  

Keywords:  Bacteria; Bioremediation; Co-occurrence network; Community structure; Harrowing; Mesocosms; Oil pollution; T-RFLP

Mesh:

Substances:

Year:  2015        PMID: 25847440     DOI: 10.1007/s11356-015-4373-2

Source DB:  PubMed          Journal:  Environ Sci Pollut Res Int        ISSN: 0944-1344            Impact factor:   4.223


  34 in total

1.  Effects of heavy fuel oil on the bacterial community structure of a pristine microbial mat.

Authors:  Sylvain Bordenave; María Soledad Goñi-Urriza; Pierre Caumette; Robert Duran
Journal:  Appl Environ Microbiol       Date:  2007-08-17       Impact factor: 4.792

2.  Colloquium paper: resistance, resilience, and redundancy in microbial communities.

Authors:  Steven D Allison; Jennifer B H Martiny
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-11       Impact factor: 11.205

3.  Response of archaeal communities to oil spill in bioturbated mudflat sediments.

Authors:  Magalie Stauffert; Robert Duran; Claire Gassie; Cristiana Cravo-Laureau
Journal:  Microb Ecol       Date:  2013-09-22       Impact factor: 4.552

4.  Impact of a simulated oil spill on benthic phototrophs and nitrogen-fixing bacteria in mudflat mesocosms.

Authors:  Panagiota-Myrsini Chronopoulou; Anne Fahy; Frédéric Coulon; Sandrine Païssé; Marisol Goñi-Urriza; Louis Peperzak; Laura Acuña Alvarez; Boyd A McKew; Tracy Lawson; Kenneth N Timmis; Robert Duran; Graham J C Underwood; Terry J McGenity
Journal:  Environ Microbiol       Date:  2012-09-16       Impact factor: 5.491

5.  Biodegradation of polycyclic aromatic hydrocarbons by a halophilic microbial consortium.

Authors:  Seyed Mohammad Mehdi Dastgheib; Mohammad Ali Amoozegar; Khosro Khajeh; Mahmoud Shavandi; Antonio Ventosa
Journal:  Appl Microbiol Biotechnol       Date:  2011-11-16       Impact factor: 4.813

6.  An information-intensive approach to the molecular pharmacology of cancer.

Authors:  J N Weinstein; T G Myers; P M O'Connor; S H Friend; A J Fornace; K W Kohn; T Fojo; S E Bates; L V Rubinstein; N L Anderson; J K Buolamwini; W W van Osdol; A P Monks; D A Scudiero; E A Sausville; D W Zaharevitz; B Bunow; V N Viswanadhan; G S Johnson; R E Wittes; K D Paull
Journal:  Science       Date:  1997-01-17       Impact factor: 47.728

7.  Effect of oxic/anoxic switches on bacterial communities and PAH biodegradation in an oil-contaminated sludge.

Authors:  Isabelle Vitte; Robert Duran; Ronan Jézéquel; Pierre Caumette; Cristiana Cravo-Laureau
Journal:  Environ Sci Pollut Res Int       Date:  2011-03-10       Impact factor: 4.223

8.  17.alpha.(H)-21.beta.(H)-hopane as a conserved internal marker for estimating the biodegradation of crude oil.

Authors:  R C Prince; D L Elmendorf; J R Lute; C S Hsu; C E Haith; J D Senius; G J Dechert; G S Douglas; E L Butler
Journal:  Environ Sci Technol       Date:  1994-01-01       Impact factor: 9.028

9.  Methanogenic octadecene degradation by syntrophic enrichment culture from brackish sediments.

Authors:  Agnès Hirschler-Réa; Cristiana Cravo-Laureau; Laurence Casalot; Robert Matheron
Journal:  Curr Microbiol       Date:  2012-07-28       Impact factor: 2.188

10.  Cytoscape 2.8: new features for data integration and network visualization.

Authors:  Michael E Smoot; Keiichiro Ono; Johannes Ruscheinski; Peng-Liang Wang; Trey Ideker
Journal:  Bioinformatics       Date:  2010-12-12       Impact factor: 6.937

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  4 in total

1.  Microbial ecology of hydrocarbon-polluted coastal sediments.

Authors:  Robert Duran; Philippe Cuny; Patricia Bonin; Cristiana Cravo-Laureau
Journal:  Environ Sci Pollut Res Int       Date:  2015-09-18       Impact factor: 4.223

2.  Use of dispersant in mudflat oil-contaminated sediment: behavior and effects of dispersed oil on micro- and macrobenthos.

Authors:  Philippe Cuny; Franck Gilbert; Cécile Militon; Georges Stora; Patricia Bonin; Valérie Michotey; Sophie Guasco; Karine Duboscq; Christine Cagnon; Ronan Jézéquel; Cristiana Cravo-Laureau; Robert Duran
Journal:  Environ Sci Pollut Res Int       Date:  2015-06-11       Impact factor: 4.223

3.  Role of environmental factors and microorganisms in determining the fate of polycyclic aromatic hydrocarbons in the marine environment.

Authors:  Robert Duran; Cristiana Cravo-Laureau
Journal:  FEMS Microbiol Rev       Date:  2016-11-01       Impact factor: 16.408

4.  Variation of Oxygenation Conditions on a Hydrocarbonoclastic Microbial Community Reveals Alcanivorax and Cycloclasticus Ecotypes.

Authors:  Fanny Terrisse; Cristiana Cravo-Laureau; Cyril Noël; Christine Cagnon; Alex J Dumbrell; Terry J McGenity; Robert Duran
Journal:  Front Microbiol       Date:  2017-08-16       Impact factor: 5.640

  4 in total

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