| Literature DB >> 25844215 |
Nesrine Amiri1, Soumaya Nasri1, Thierry Roisnel2, Gérard Simonneaux3, Habib Nasri1.
Abstract
The title compound, [Mg(C44H24Br4N4)(H2O)2] or [Mg(TBrPP)(H2O)2], where TBrPP is the 5,10,15,20-tetra-kis-(4-bromo-phen-yl)porphyrinato ligand, was obtained unintentionally as a by-product of the reaction of the [Mg(TBrPP)] complex with an excess of di-methyl-glyoxime in di-chloro-methane. The entire mol-ecule exhibits point group symmetry 4/m. In the asymmetric unit, except for two C atoms of the phenyl ring, all other atoms lie on special positions. The Mg(II) atom is situated at a site with symmetry 4/m, while the N and the C atoms of the porphyrin macrocycle, as well as two C atoms of the phenyl ring and the Br atom lie in the mirror plane containing the porphyrin core. The H atoms of the axially bonded water mol-ecule are incompatible with the fourfold rotation axis and are disordered over two sites. In the crystal, mol-ecules are packed in rows along [001]. Weak inter-molecular C-H⋯π and C-H⋯Br inter-actions, as well as O-H⋯Br hydrogen bonds, stabilize the crystal packing.Entities:
Keywords: C—H⋯Br interactions; C—H⋯π interactions; O—H⋯Br hydrogen bonds; crystal structure; magnesium porphyrin complex
Year: 2015 PMID: 25844215 PMCID: PMC4350761 DOI: 10.1107/S2056989015003722
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| [Mg(C44H24Br4N4)(H2O)2] | |
| Mo | |
| Tetragonal, | Cell parameters from 1411 reflections |
| Hall symbol: -I 4 | θ = 2.6–26.9° |
| µ = 3.95 mm−1 | |
| Prism, black | |
| 0.37 × 0.27 × 0.14 mm | |
| Bruker APEXII diffractometer | 940 reflections with |
| Graphite monochromator | |
| CCD rotation images, thin slices scans | θmax = 27.5°, θmin = 3.8° |
| Absorption correction: multi-scan ( | |
| 4471 measured reflections | |
| 1248 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1248 reflections | (Δ/σ)max = 0.009 |
| 81 parameters | Δρmax = 0.50 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Mg | 0.5 | 0.5 | 0.5 | 0.0248 (5) | |
| O1 | 0.5 | 0.5 | 0.2636 (4) | 0.0376 (9) | |
| H1O1 | 0.473 (4) | 0.560 (3) | 0.210 (6) | 0.045* | 0.5 |
| N1 | 0.46158 (17) | 0.36592 (17) | 0.5 | 0.0192 (6) | |
| C1 | 0.3751 (2) | 0.3337 (2) | 0.5 | 0.0183 (7) | |
| C2 | 0.3771 (2) | 0.2366 (2) | 0.5 | 0.0195 (7) | |
| H2 | 0.3262 | 0.1977 | 0.5 | 0.023* | |
| C3 | 0.4643 (2) | 0.2109 (2) | 0.5 | 0.0219 (7) | |
| H3 | 0.4865 | 0.1508 | 0.5 | 0.026* | |
| C4 | 0.5177 (2) | 0.2931 (2) | 0.5 | 0.0196 (7) | |
| C5 | 0.2966 (2) | 0.3872 (2) | 0.5 | 0.0179 (7) | |
| C11 | 0.2081 (2) | 0.33768 (19) | 0.5 | 0.0192 (7) | |
| C12 | 0.16663 (16) | 0.31403 (16) | 0.6263 (3) | 0.0307 (6) | |
| H12 | 0.1942 | 0.3299 | 0.714 | 0.037* | |
| C13 | 0.08517 (16) | 0.26732 (17) | 0.6273 (3) | 0.0324 (6) | |
| H13 | 0.0572 | 0.2512 | 0.7146 | 0.039* | |
| C14 | 0.0463 (2) | 0.2451 (2) | 0.5 | 0.0229 (7) | |
| Br1 | −0.06342 (2) | 0.17805 (2) | 0.5 | 0.03531 (15) |
| Mg | 0.0142 (7) | 0.0142 (7) | 0.0461 (16) | 0 | 0 | 0 |
| O1 | 0.0376 (13) | 0.0376 (13) | 0.038 (2) | 0 | 0 | 0 |
| N1 | 0.0124 (13) | 0.0162 (14) | 0.0290 (16) | −0.0007 (10) | 0 | 0 |
| C1 | 0.0169 (16) | 0.0150 (16) | 0.0231 (18) | −0.0024 (12) | 0 | 0 |
| C2 | 0.0199 (16) | 0.0152 (15) | 0.0233 (18) | −0.0031 (12) | 0 | 0 |
| C3 | 0.0246 (17) | 0.0137 (15) | 0.0274 (19) | 0.0007 (13) | 0 | 0 |
| C4 | 0.0186 (16) | 0.0167 (16) | 0.0234 (18) | −0.0014 (13) | 0 | 0 |
| C5 | 0.0164 (16) | 0.0165 (16) | 0.0209 (18) | −0.0009 (13) | 0 | 0 |
| C11 | 0.0166 (16) | 0.0114 (15) | 0.0296 (19) | 0.0002 (12) | 0 | 0 |
| C12 | 0.0260 (13) | 0.0389 (15) | 0.0272 (14) | −0.0117 (11) | 0.0002 (11) | −0.0054 (12) |
| C13 | 0.0295 (14) | 0.0356 (15) | 0.0321 (15) | −0.0096 (11) | 0.0095 (12) | −0.0013 (12) |
| C14 | 0.0158 (16) | 0.0129 (16) | 0.040 (2) | −0.0010 (12) | 0 | 0 |
| Br1 | 0.01523 (19) | 0.0223 (2) | 0.0684 (3) | −0.00419 (14) | 0 | 0 |
| Mg—N1i | 2.069 (2) | C3—C4 | 1.454 (4) |
| Mg—N1 | 2.069 (2) | C3—H3 | 0.95 |
| Mg—N1ii | 2.069 (2) | C4—C5iii | 1.412 (4) |
| Mg—N1iii | 2.069 (2) | C5—C4i | 1.412 (4) |
| Mg—O1ii | 2.221 (4) | C5—C11 | 1.504 (4) |
| Mg—O1 | 2.221 (4) | C11—C12 | 1.382 (3) |
| O1—H1O1 | 1.10 (5) | C11—C12iv | 1.382 (3) |
| N1—C4 | 1.363 (4) | C12—C13 | 1.393 (3) |
| N1—C1 | 1.368 (4) | C12—H12 | 0.95 |
| C1—C5 | 1.409 (4) | C13—C14 | 1.369 (3) |
| C1—C2 | 1.440 (4) | C13—H13 | 0.95 |
| C2—C3 | 1.348 (4) | C14—C13iv | 1.369 (3) |
| C2—H2 | 0.95 | C14—Br1 | 1.906 (3) |
| N1i—Mg—N1 | 89.998 (2) | N1—C4—C3 | 109.4 (3) |
| N1—Mg—N1ii | 180.00 (14) | C5iii—C4—C3 | 125.1 (3) |
| O1ii—Mg—O1 | 180 | C1—C5—C4i | 126.4 (3) |
| Mg—O1—H1O1 | 117 (3) | C1—C5—C11 | 116.5 (3) |
| C4—N1—C1 | 107.1 (2) | C4i—C5—C11 | 117.1 (3) |
| C4—N1—Mg | 126.4 (2) | C12—C11—C12iv | 118.3 (3) |
| C1—N1—Mg | 126.5 (2) | C12—C11—C5 | 120.85 (15) |
| N1—C1—C5 | 125.3 (3) | C12iv—C11—C5 | 120.85 (15) |
| N1—C1—C2 | 109.3 (3) | C11—C12—C13 | 121.3 (2) |
| C5—C1—C2 | 125.5 (3) | C11—C12—H12 | 119.4 |
| C3—C2—C1 | 107.6 (3) | C13—C12—H12 | 119.4 |
| C3—C2—H2 | 126.2 | C14—C13—C12 | 118.7 (2) |
| C1—C2—H2 | 126.2 | C14—C13—H13 | 120.7 |
| C2—C3—C4 | 106.6 (3) | C12—C13—H13 | 120.7 |
| C2—C3—H3 | 126.7 | C13—C14—C13iv | 121.9 (3) |
| C4—C3—H3 | 126.7 | C13—C14—Br1 | 119.04 (15) |
| N1—C4—C5iii | 125.5 (3) | C13iv—C14—Br1 | 119.05 (15) |
| N1i—Mg—N1—C4 | 180 | C1—N1—C4—C3 | 0 |
| N1iii—Mg—N1—C4 | 0 | Mg—N1—C4—C3 | 180 |
| O1ii—Mg—N1—C4 | −90 | C2—C3—C4—N1 | 0 |
| O1—Mg—N1—C4 | 90 | C2—C3—C4—C5iii | 180 |
| N1i—Mg—N1—C1 | 0 | N1—C1—C5—C4i | 0 |
| N1iii—Mg—N1—C1 | 180 | C2—C1—C5—C4i | 180 |
| O1ii—Mg—N1—C1 | 90 | N1—C1—C5—C11 | 180 |
| O1—Mg—N1—C1 | −90 | C2—C1—C5—C11 | 0 |
| C4—N1—C1—C5 | 180 | C1—C5—C11—C12 | 89.7 (3) |
| Mg—N1—C1—C5 | 0 | C4i—C5—C11—C12 | −90.3 (3) |
| C4—N1—C1—C2 | 0 | C1—C5—C11—C12iv | −89.7 (3) |
| Mg—N1—C1—C2 | 180 | C4i—C5—C11—C12iv | 90.3 (3) |
| N1—C1—C2—C3 | 0 | C12iv—C11—C12—C13 | 0.2 (5) |
| C5—C1—C2—C3 | 180 | C5—C11—C12—C13 | −179.3 (2) |
| C1—C2—C3—C4 | 0 | C11—C12—C13—C14 | −0.1 (4) |
| C1—N1—C4—C5iii | 180 | C12—C13—C14—C13iv | 0.1 (5) |
| Mg—N1—C4—C5iii | 0 | C12—C13—C14—Br1 | 178.2 (2) |
| H··· | ||||
| C13—H13··· | 0.95 | 2.74 | 3.615 (3) | 153 |
| O1—H1 | 1.10 (5) | 2.69 (5) | 3.741 (3) | 159 (4) |
| C2—H2···Br1vii | 0.95 | 2.97 | 3.914 (3) | 175 (1) |
Hydrogen-bond geometry (, )
Cg1 is the centroid of the N1/C1C4 pyrrole ring.
|
|
| H |
|
|
|---|---|---|---|---|
| C13H13 | 0.95 | 2.74 | 3.615(3) | 153 |
| O1H1 | 1.10(5) | 2.69(5) | 3.741(3) | 159(4) |
| C2H2Br1iii | 0.95 | 2.97 | 3.914(3) | 175(1) |
Symmetry codes: (i) ; (ii) ; (iii) .