Literature DB >> 25843427

Energy-Based Molecular Fragmentation Methods.

Michael A Collins1, Ryan P A Bettens2.   

Abstract

Year:  2015        PMID: 25843427     DOI: 10.1021/cr500455b

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


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  14 in total

1.  Benchmark fragment-based (1)H, (13)C, (15)N and (17)O chemical shift predictions in molecular crystals.

Authors:  Joshua D Hartman; Ryan A Kudla; Graeme M Day; Leonard J Mueller; Gregory J O Beran
Journal:  Phys Chem Chem Phys       Date:  2016-07-19       Impact factor: 3.676

2.  Computational Approach to Molecular Catalysis by 3d Transition Metals: Challenges and Opportunities.

Authors:  Konstantinos D Vogiatzis; Mikhail V Polynski; Justin K Kirkland; Jacob Townsend; Ali Hashemi; Chong Liu; Evgeny A Pidko
Journal:  Chem Rev       Date:  2018-10-30       Impact factor: 60.622

3.  Quantum mechanical force fields for condensed phase molecular simulations.

Authors:  Timothy J Giese; Darrin M York
Journal:  J Phys Condens Matter       Date:  2017-08-17       Impact factor: 2.333

4.  The electrostatic embedding contribution to DFT calculations of ligand-amino acid residues interaction.

Authors:  Tamires C da Silva Ribeiro; Marcelo L Lyra; Vinícius Manzoni
Journal:  J Mol Model       Date:  2018-07-19       Impact factor: 1.810

5.  SAMPL7 TrimerTrip host-guest binding poses and binding affinities from spherical-coordinates-biased simulations.

Authors:  Zhaoxi Sun
Journal:  J Comput Aided Mol Des       Date:  2020-08-10       Impact factor: 3.686

6.  The Impact of Electron Correlation on Describing QM/MM Interactions in the Attendant Molecular Dynamics Simulations of CO in Myoglobin.

Authors:  Xianwei Wang; Chenhui Lu; Maoyou Yang
Journal:  Sci Rep       Date:  2020-05-22       Impact factor: 4.379

7.  An Ab Initio QM/MM Study of the Electrostatic Contribution to Catalysis in the Active Site of Ketosteroid Isomerase.

Authors:  Xianwei Wang; Xiao He
Journal:  Molecules       Date:  2018-09-20       Impact factor: 4.411

8.  A quantum mechanical computational method for modeling electrostatic and solvation effects of protein.

Authors:  Xianwei Wang; Yang Li; Ya Gao; Zejin Yang; Chenhui Lu; Tong Zhu
Journal:  Sci Rep       Date:  2018-04-03       Impact factor: 4.379

9.  A Force Balanced Fragmentation Method for ab Initio Molecular Dynamic Simulation of Protein.

Authors:  Mingyuan Xu; Tong Zhu; John Z H Zhang
Journal:  Front Chem       Date:  2018-05-30       Impact factor: 5.221

10.  fragHAR: towards ab initio quantum-crystallographic X-ray structure refinement for polypeptides and proteins.

Authors:  Justin Bergmann; Max Davidson; Esko Oksanen; Ulf Ryde; Dylan Jayatilaka
Journal:  IUCrJ       Date:  2020-01-17       Impact factor: 4.769

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