Literature DB >> 25836756

Transcriptional and epigenetic regulation of autophagy in aging.

Louis R Lapierre1, Caroline Kumsta, Marco Sandri, Andrea Ballabio, Malene Hansen.   

Abstract

Macroautophagy is a major intracellular degradation process recognized as playing a central role in cell survival and longevity. This multistep process is extensively regulated at several levels, including post-translationally through the action of conserved longevity factors such as the nutrient sensor TOR. More recently, transcriptional regulation of autophagy genes has emerged as an important mechanism for ensuring the somatic maintenance and homeostasis necessary for a long life span. Autophagy is increased in many long-lived model organisms and contributes significantly to their longevity. In turn, conserved transcription factors, particularly the helix-loop-helix transcription factor TFEB and the forkhead transcription factor FOXO, control the expression of many autophagy-related genes and are important for life-span extension. In this review, we discuss recent progress in understanding the contribution of these transcription factors to macroautophagy regulation in the context of aging. We also review current research on epigenetic changes, such as histone modification by the deacetylase SIRT1, that influence autophagy-related gene expression and additionally affect aging. Understanding the molecular regulation of macroautophagy in relation to aging may offer new avenues for the treatment of age-related diseases.

Entities:  

Keywords:  AMPK, AMP-activated protein kinase; Atg, autophagy related; BNIP3, BCL2/adenovirus E1B 19kDa interacting protein 3; CaN, calcineurin; HDAC, histone deacetylase; FOXO; HAT, histone acetyltransferase; LC3, microtubule-associated protein 1 light chain 3; MITF, microphthalmia-associated transcription factor; PDPK1/2, 3-phosphoinositide dependent kinase 1/2; PtdIns3K, phosphatidylinositol 3-kinase; PtdIns3P, phosphatidylinositol 3-phosphate; SIRT1; TFEB; TFEB, transcription factor EB; TOR, target of rapamycin; TSC, tuberous sclerosis complex; UVRAG, UV radiation resistance associated.; acetyl-CoA, acetyl coenzyme A; autophagy; epigenetics; longevity; miRNA; transcription.

Mesh:

Substances:

Year:  2015        PMID: 25836756      PMCID: PMC4502732          DOI: 10.1080/15548627.2015.1034410

Source DB:  PubMed          Journal:  Autophagy        ISSN: 1554-8627            Impact factor:   16.016


  170 in total

Review 1.  Autophagic lysosome reformation.

Authors:  Yang Chen; Li Yu
Journal:  Exp Cell Res       Date:  2012-09-19       Impact factor: 3.905

2.  mir-30d Regulates multiple genes in the autophagy pathway and impairs autophagy process in human cancer cells.

Authors:  Xiaojun Yang; Xiaomin Zhong; Janos L Tanyi; Jianfeng Shen; Congjian Xu; Peng Gao; Tim M Zheng; Angela DeMichele; Lin Zhang
Journal:  Biochem Biophys Res Commun       Date:  2012-12-27       Impact factor: 3.575

3.  The nutrient-responsive transcription factor TFE3 promotes autophagy, lysosomal biogenesis, and clearance of cellular debris.

Authors:  José A Martina; Heba I Diab; Li Lishu; Lim Jeong-A; Simona Patange; Nina Raben; Rosa Puertollano
Journal:  Sci Signal       Date:  2014-01-21       Impact factor: 8.192

Review 4.  Lessons from C. elegans: signaling pathways for longevity.

Authors:  Louis R Lapierre; Malene Hansen
Journal:  Trends Endocrinol Metab       Date:  2012-08-30       Impact factor: 12.015

5.  MiR-34 modulates Caenorhabditis elegans lifespan via repressing the autophagy gene atg9.

Authors:  Jurong Yang; Dapeng Chen; Yani He; Alicia Meléndez; Zhe Feng; Quan Hong; Xueyuan Bai; Qinggang Li; Guangyan Cai; Jianzhong Wang; Xiangmei Chen
Journal:  Age (Dordr)       Date:  2011-11-12

6.  Direct and indirect gene regulation by a life-extending FOXO protein in C. elegans: roles for GATA factors and lipid gene regulators.

Authors:  Peichuan Zhang; Meredith Judy; Seung-Jae Lee; Cynthia Kenyon
Journal:  Cell Metab       Date:  2013-01-08       Impact factor: 27.287

Review 7.  The machinery of macroautophagy.

Authors:  Yuchen Feng; Ding He; Zhiyuan Yao; Daniel J Klionsky
Journal:  Cell Res       Date:  2013-12-24       Impact factor: 25.617

8.  MicroRNA-34a targets Bcl-2 and sensitizes human hepatocellular carcinoma cells to sorafenib treatment.

Authors:  Fan Yang; Qing-jun Li; Zhen-bin Gong; Liang Zhou; Nan You; Su Wang; Xiao-lei Li; Jun-jie Li; Jia-ze An; De-sheng Wang; Yong He; Ke-feng Dou
Journal:  Technol Cancer Res Treat       Date:  2013-07-11

9.  Regulation of autophagy by miR-30d impacts sensitivity of anaplastic thyroid carcinoma to cisplatin.

Authors:  Y Zhang; W Q Yang; H Zhu; Y Y Qian; L Zhou; Y J Ren; X C Ren; L Zhang; X P Liu; C G Liu; Z J Ming; B Li; B Chen; J R Wang; Y B Liu; J M Yang
Journal:  Biochem Pharmacol       Date:  2013-12-15       Impact factor: 5.858

10.  Autophagy induced by the class III histone deacetylase Sirt1 prevents prion peptide neurotoxicity.

Authors:  Jae-Kyo Jeong; Myung-Hee Moon; You-Jin Lee; Jae-Won Seol; Sang-Youel Park
Journal:  Neurobiol Aging       Date:  2012-05-09       Impact factor: 4.673

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  124 in total

1.  Nicotinamide riboside promotes autolysosome clearance in preventing doxorubicin-induced cardiotoxicity.

Authors:  Dong Zheng; Yi Zhang; Ming Zheng; Ting Cao; Grace Wang; Lulu Zhang; Rui Ni; Joseph Brockman; Huiting Zhong; Guo-Chang Fan; Tianqing Peng
Journal:  Clin Sci (Lond)       Date:  2019-07-15       Impact factor: 6.124

2.  Effects of light on aging and longevity.

Authors:  Jie Shen; John Tower
Journal:  Ageing Res Rev       Date:  2019-05-30       Impact factor: 10.895

Review 3.  Emerging connections between RNA and autophagy.

Authors:  Lisa B Frankel; Michal Lubas; Anders H Lund
Journal:  Autophagy       Date:  2016-10-07       Impact factor: 16.016

4.  6-OHDA Induces Oxidation of F-box Protein Fbw7β by Chaperone-Mediated Autophagy in Parkinson's Model.

Authors:  Xiufeng Wang; Heng Zhai; Fang Wang
Journal:  Mol Neurobiol       Date:  2017-07-22       Impact factor: 5.590

Review 5.  Molecular definitions of autophagy and related processes.

Authors:  Lorenzo Galluzzi; Eric H Baehrecke; Andrea Ballabio; Patricia Boya; José Manuel Bravo-San Pedro; Francesco Cecconi; Augustine M Choi; Charleen T Chu; Patrice Codogno; Maria Isabel Colombo; Ana Maria Cuervo; Jayanta Debnath; Vojo Deretic; Ivan Dikic; Eeva-Liisa Eskelinen; Gian Maria Fimia; Simone Fulda; David A Gewirtz; Douglas R Green; Malene Hansen; J Wade Harper; Marja Jäättelä; Terje Johansen; Gabor Juhasz; Alec C Kimmelman; Claudine Kraft; Nicholas T Ktistakis; Sharad Kumar; Beth Levine; Carlos Lopez-Otin; Frank Madeo; Sascha Martens; Jennifer Martinez; Alicia Melendez; Noboru Mizushima; Christian Münz; Leon O Murphy; Josef M Penninger; Mauro Piacentini; Fulvio Reggiori; David C Rubinsztein; Kevin M Ryan; Laura Santambrogio; Luca Scorrano; Anna Katharina Simon; Hans-Uwe Simon; Anne Simonsen; Nektarios Tavernarakis; Sharon A Tooze; Tamotsu Yoshimori; Junying Yuan; Zhenyu Yue; Qing Zhong; Guido Kroemer
Journal:  EMBO J       Date:  2017-06-08       Impact factor: 11.598

Review 6.  Autophagy as an emerging target in cardiorenal metabolic disease: From pathophysiology to management.

Authors:  Yingmei Zhang; Adam T Whaley-Connell; James R Sowers; Jun Ren
Journal:  Pharmacol Ther       Date:  2018-06-22       Impact factor: 12.310

7.  Janus Kinase 2 Regulates Transcription Factor EB Expression and Autophagy Completion in Glomerular Podocytes.

Authors:  Tamadher A Alghamdi; Syamantak Majumder; Karina Thieme; Sri N Batchu; Kathryn E White; Youan Liu; Angela S Brijmohan; Bridgit B Bowskill; Suzanne L Advani; Minna Woo; Andrew Advani
Journal:  J Am Soc Nephrol       Date:  2017-04-19       Impact factor: 10.121

8.  Increasing Cardiomyocyte Atrogin-1 Reduces Aging-Associated Fibrosis and Regulates Remodeling in Vivo.

Authors:  Roberto Mota; Traci L Parry; Cecelia C Yates; Zhaoyan Qiang; Samuel C Eaton; Jean Marie Mwiza; Deepthi Tulasi; Jonathan C Schisler; Cam Patterson; Tania Zaglia; Marco Sandri; Monte S Willis
Journal:  Am J Pathol       Date:  2018-05-23       Impact factor: 4.307

9.  RNA Binding Protein HuR Promotes Autophagosome Formation by Regulating Expression of Autophagy-Related Proteins 5, 12, and 16 in Human Hepatocellular Carcinoma Cells.

Authors:  Eunbyul Ji; Chongtae Kim; Hoin Kang; Sojin Ahn; Myeongwoo Jung; Youlim Hong; Hyosun Tak; Sukchan Lee; Wook Kim; Eun Kyung Lee
Journal:  Mol Cell Biol       Date:  2019-03-01       Impact factor: 4.272

10.  Quantitative chemical proteomics profiling of de novo protein synthesis during starvation-mediated autophagy.

Authors:  Jigang Wang; Jianbin Zhang; Yew-Mun Lee; Pin-Lang Koh; Shukie Ng; Feichao Bao; Qingsong Lin; Han-Ming Shen
Journal:  Autophagy       Date:  2016-07-27       Impact factor: 16.016

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