Literature DB >> 2583479

A new kind of informational suppression in the nematode Caenorhabditis elegans.

J Hodgkin1, A Papp, R Pulak, V Ambros, P Anderson.   

Abstract

Independent reversions of mutations affecting three different Caenorhabditis elegans genes have each yielded representatives of the same set of extragenic suppressors. Mutations at any one of six loci act as allele-specific recessive suppressors of certain allels of unc-54 (a myosin heavy chain gene), lin-29 (a heterochronic gene), and tra-2 (a sex determination gene). The same mutations also suppress certain alleles of another sex determination gene, tra-1, and of a morphogenetic gene, dpy-5. In addition to their suppression phenotype, the suppressor mutations cause abnormal morphogenesis of the male bursa and the hermaphrodite vulva. We name these genes smg-1 through smg-6 (suppressor with morphogenetic effect on genitalia), in order to distinguish them from mab (male abnormal) genes that can mutate to produce abnormal genitalia but which do not act as suppressors (smg-1 and smg-2 are new names for two previously described genes, mab-1 and mab-11). The patterns of suppression, and the interactions between the different smg genes, are described and discussed. In general, suppression is recessive and incomplete, and at least some of the suppressed mutations are hypomorphic in nature. A suppressible allele of unc-54 contains a deletion in the 3' noncoding region of the gene; the protein coding region of the gene is apparently unaffected. This suggests that the smg suppressors affect a process other than translation, for example mRNA processing, transport, or stability.

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Year:  1989        PMID: 2583479      PMCID: PMC1203802     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  31 in total

Review 1.  Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.

Authors:  G Eggertsson; D Söll
Journal:  Microbiol Rev       Date:  1988-09

Review 2.  Mechanisms of suppression.

Authors:  P E Hartman; J R Roth
Journal:  Adv Genet       Date:  1973       Impact factor: 1.944

3.  Differential expression of five tRNA(UAGTrp) amber suppressors in Caenorhabditis elegans.

Authors:  K Kondo; J Hodgkin; R H Waterston
Journal:  Mol Cell Biol       Date:  1988-09       Impact factor: 4.272

4.  Insertion and excision of Caenorhabditis elegans transposable element Tc1.

Authors:  D Eide; P Anderson
Journal:  Mol Cell Biol       Date:  1988-02       Impact factor: 4.272

5.  Male Phenotypes and Mating Efficiency in CAENORHABDITIS ELEGANS.

Authors:  J Hodgkin
Journal:  Genetics       Date:  1983-01       Impact factor: 4.562

6.  Genetic and Phenotypic Characterization of Roller Mutants of CAENORHABDITIS ELEGANS.

Authors:  G N Cox; J S Laufer; M Kusch; R S Edgar
Journal:  Genetics       Date:  1980-06       Impact factor: 4.562

7.  The gene structures of spontaneous mutations affecting a Caenorhabditis elegans myosin heavy chain gene.

Authors:  D Eide; P Anderson
Journal:  Genetics       Date:  1985-01       Impact factor: 4.562

8.  Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA.

Authors:  R Parker; P G Siliciano; C Guthrie
Journal:  Cell       Date:  1987-04-24       Impact factor: 41.582

9.  A second informational suppressor, SUP-7 X, in Caenorhabditis elegans.

Authors:  R H Waterston
Journal:  Genetics       Date:  1981-02       Impact factor: 4.562

10.  A visible allele of the muscle gene sup-10X of C. elegans.

Authors:  I Greenwald; H R Horvitz
Journal:  Genetics       Date:  1986-05       Impact factor: 4.562

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  136 in total

Review 1.  RNA interference: biology, mechanism, and applications.

Authors:  Neema Agrawal; P V N Dasaradhi; Asif Mohmmed; Pawan Malhotra; Raj K Bhatnagar; Sunil K Mukherjee
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

2.  Molecular basis of loss-of-function mutations in the glp-1 gene of Caenorhabditis elegans.

Authors:  V Kodoyianni; E M Maine; J Kimble
Journal:  Mol Biol Cell       Date:  1992-11       Impact factor: 4.138

3.  Translation repression by GLD-1 protects its mRNA targets from nonsense-mediated mRNA decay in C. elegans.

Authors:  Min-Ho Lee; Tim Schedl
Journal:  Genes Dev       Date:  2004-04-22       Impact factor: 11.361

4.  A genome-wide RNAi screen identifies genes regulating the formation of P bodies in C. elegans and their functions in NMD and RNAi.

Authors:  Yinyan Sun; Peiguo Yang; Yuxia Zhang; Xin Bao; Jun Li; Wenru Hou; Xiangyu Yao; Jinghua Han; Hong Zhang
Journal:  Protein Cell       Date:  2011-12-17       Impact factor: 14.870

5.  The nonsense-mediated decay pathway maintains synapse architecture and synaptic vesicle cycle efficacy.

Authors:  A Ashleigh Long; Cecon T Mahapatra; Elvin A Woodruff; Jeff Rohrbough; Hung-Tat Leung; Shikoh Shino; Lingling An; Rebecca W Doerge; Mark M Metzstein; William L Pak; Kendal Broadie
Journal:  J Cell Sci       Date:  2010-09-07       Impact factor: 5.285

Review 6.  Mechanisms of deadenylation-dependent decay.

Authors:  Chyi-Ying A Chen; Ann-Bin Shyu
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-09-15       Impact factor: 9.957

7.  Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets.

Authors:  Jan Rehwinkel; Ivica Letunic; Jeroen Raes; Peer Bork; Elisa Izaurralde
Journal:  RNA       Date:  2005-10       Impact factor: 4.942

8.  Smg1 nonsense mutations do not abolish nonsense-mediated mRNA decay in Drosophila melanogaster.

Authors:  Zhenzhong Chen; Katherine R Smith; Philip Batterham; Charles Robin
Journal:  Genetics       Date:  2005-06-18       Impact factor: 4.562

9.  Identification of an additional gene required for eukaryotic nonsense mRNA turnover.

Authors:  B S Lee; M R Culbertson
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-24       Impact factor: 11.205

10.  Genetic and biochemical characterization of mutations in the ATPase and helicase regions of the Upf1 protein.

Authors:  Y Weng; K Czaplinski; S W Peltz
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

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