Literature DB >> 25832030

Determination of Noncovalent Binding Using a Continuous Stirred Tank Reactor as a Flow Injection Device Coupled to Electrospray Ionization Mass Spectrometry.

Inês C Santos1, Veronica B Waybright, Hui Fan, Sabra Ramirez, Raquel B R Mesquita, António O S S Rangel, Petr Fryčák, Kevin A Schug.   

Abstract

Described is a new method based on the concept of controlled band dispersion, achieved by hyphenating flow injection analysis with ESI-MS for noncovalent binding determinations. A continuous stirred tank reactor (CSTR) was used as a FIA device for exponential dilution of an equimolar host-guest solution over time. The data obtained was treated for the noncovalent binding determination using an equimolar binding model. Dissociation constants between vancomycin and Ac-Lys(Ac)-Ala-Ala-OH peptide stereoisomers were determined using both the positive and negative ionization modes. The results obtained for Ac-L-Lys(Ac)-D-Ala-D-Ala (a model for a Gram-positive bacterial cell wall) binding were in reasonable agreement with literature values made by other mass spectrometry binding determination techniques. Also, the developed method allowed the determination of dissociation constants for vancomycin with Ac-L-Lys(Ac)-D-Ala-L-Ala, Ac-L-Lys(Ac)-L-Ala-D-Ala, and Ac-L-Lys(Ac)-L-Ala-L-Ala. Although some differences in measured binding affinities were noted using different ionization modes, the results of each determination were generally consistent. Differences are likely attributable to the influence of a pseudo-physiological ammonium acetate buffer solution on the formation of positively- and negatively-charged ionic complexes.

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Year:  2015        PMID: 25832030     DOI: 10.1007/s13361-015-1113-2

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  24 in total

Review 1.  NMR methods for the determination of protein-ligand dissociation constants.

Authors:  Lee Fielding
Journal:  Curr Top Med Chem       Date:  2003       Impact factor: 3.295

2.  Quantifying labile protein-ligand interactions using electrospray ionization mass spectrometry.

Authors:  Amr El-Hawiet; Elena N Kitova; Lan Liu; John S Klassen
Journal:  J Am Soc Mass Spectrom       Date:  2010-07-29       Impact factor: 3.109

Review 3.  Differential scanning calorimetry and X-ray diffraction studies of the specificity of the interaction of antimicrobial peptides with membrane-mimetic systems.

Authors:  K Lohner; E J Prenner
Journal:  Biochim Biophys Acta       Date:  1999-12-15

4.  Affinity mesh screen materials for selective extraction and analysis of antibiotics using transmission mode desorption electrospray ionization mass spectrometry.

Authors:  Samuel H Yang; Evelyn H Wang; John A Gurak; Sumit Bhawal; Rajendrasing Deshmukh; Aruna B Wijeratne; Brian L Edwards; Frank W Foss; Richard B Timmons; Kevin A Schug
Journal:  Langmuir       Date:  2013-06-12       Impact factor: 3.882

5.  Direct affinity screening chromatography-mass spectrometry assay for identification of antibacterial agents from natural product sources.

Authors:  Kevin A Schug; Evelyn Wang; Sijia Shen; Sunaina Rao; Stephanie M Smith; Laura Hunt; Laura D Mydlarz
Journal:  Anal Chim Acta       Date:  2011-11-25       Impact factor: 6.558

6.  Controlled band dispersion for quantitative binding determination and analysis with electrospray ionization-mass spectrometry.

Authors:  Kevin A Schug; Carlos Serrano; Petr Frycák
Journal:  Mass Spectrom Rev       Date:  2010 Sep-Oct       Impact factor: 10.946

7.  Kinetic analysis of macromolecular interactions using surface plasmon resonance biosensors.

Authors: 
Journal:  Curr Opin Biotechnol       Date:  1997-02-01       Impact factor: 9.740

Review 8.  Vancomycin resistance in enterococci: reprogramming of the D-ala-D-Ala ligases in bacterial peptidoglycan biosynthesis.

Authors:  V L Healy; I A Lessard; D I Roper; J R Knox; C T Walsh
Journal:  Chem Biol       Date:  2000-05

9.  Measurement of solution-phase chiral molecular recognition in the gas phase using electrospray ionization-mass spectrometry.

Authors:  Kevin Schug; Petr Frycák; Norbert M Maier; Wolfgang Lindner
Journal:  Anal Chem       Date:  2005-06-01       Impact factor: 6.986

10.  Modifications of the acyl-D-alanyl-D-alanine terminus affecting complex-formation with vancomycin.

Authors:  M Nieto; H R Perkins
Journal:  Biochem J       Date:  1971-08       Impact factor: 3.857

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