Literature DB >> 25831549

Epigenetics. Epigenetic inheritance uncoupled from sequence-specific recruitment.

Kaushik Ragunathan1, Gloria Jih1, Danesh Moazed2.   

Abstract

Changes in histone posttranslational modifications are associated with epigenetic states that define distinct patterns of gene expression. It remains unclear whether epigenetic information can be transmitted through histone modifications independently of specific DNA sequence, DNA methylation, or RNA interference. Here we show that, in the fission yeast Schizosaccharomyces pombe, ectopically induced domains of histone H3 lysine 9 methylation (H3K9me), a conserved marker of heterochromatin, are inherited through several mitotic and meiotic cell divisions after removal of the sequence-specific initiator. The putative JmjC domain H3K9 demethylase, Epe1, and the chromodomain of the H3K9 methyltransferase, Clr4/Suv39h, play opposing roles in maintaining silent H3K9me domains. These results demonstrate how a direct "read-write" mechanism involving Clr4 propagates histone modifications and allows histones to act as carriers of epigenetic information.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2014        PMID: 25831549      PMCID: PMC4385470          DOI: 10.1126/science.1258699

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  57 in total

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Authors:  Xuehua Zhong; Jiamu Du; Christopher J Hale; Javier Gallego-Bartolome; Suhua Feng; Ajay A Vashisht; Joanne Chory; James A Wohlschlegel; Dinshaw J Patel; Steven E Jacobsen
Journal:  Cell       Date:  2014-05-22       Impact factor: 41.582

Review 2.  Combinatorial complexity in chromatin structure and function: revisiting the histone code.

Authors:  Oliver J Rando
Journal:  Curr Opin Genet Dev       Date:  2012-03-20       Impact factor: 5.578

3.  Dynamics and memory of heterochromatin in living cells.

Authors:  Nathaniel A Hathaway; Oliver Bell; Courtney Hodges; Erik L Miller; Dana S Neel; Gerald R Crabtree
Journal:  Cell       Date:  2012-06-14       Impact factor: 41.582

4.  An epigenetic trap stabilizes singular olfactory receptor expression.

Authors:  David B Lyons; William E Allen; Tracie Goh; Lulu Tsai; Gilad Barnea; Stavros Lomvardas
Journal:  Cell       Date:  2013-07-18       Impact factor: 41.582

Review 5.  Transgenerational epigenetic inheritance: myths and mechanisms.

Authors:  Edith Heard; Robert A Martienssen
Journal:  Cell       Date:  2014-03-27       Impact factor: 41.582

6.  Uncoupling of genomic and epigenetic signals in the maintenance and inheritance of heterochromatin domains in fission yeast.

Authors:  Bayly S Wheeler; Brandon T Ruderman; Huntington F Willard; Kristin C Scott
Journal:  Genetics       Date:  2011-12-05       Impact factor: 4.562

7.  Elimination of shelterin components bypasses RNAi for pericentric heterochromatin assembly.

Authors:  Xavier Tadeo; Jiyong Wang; Scott P Kallgren; Jinqiang Liu; Bharat D Reddy; Feng Qiao; Songtao Jia
Journal:  Genes Dev       Date:  2013-11-15       Impact factor: 11.361

8.  Recombinant antibodies to histone post-translational modifications.

Authors:  Takamitsu Hattori; Joseph M Taft; Kalina M Swist; Hao Luo; Heather Witt; Matthew Slattery; Akiko Koide; Alexander J Ruthenburg; Krzysztof Krajewski; Brian D Strahl; Kevin P White; Peggy J Farnham; Yingming Zhao; Shohei Koide
Journal:  Nat Methods       Date:  2013-08-18       Impact factor: 28.547

9.  Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex.

Authors:  Emily D Egan; Craig R Braun; Steven P Gygi; Danesh Moazed
Journal:  RNA       Date:  2014-04-08       Impact factor: 4.942

10.  Determinants of heterochromatic siRNA biogenesis and function.

Authors:  Ruby Yu; Gloria Jih; Nahid Iglesias; Danesh Moazed
Journal:  Mol Cell       Date:  2013-12-26       Impact factor: 17.970

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  122 in total

Review 1.  Epigenetic regulation of ageing: linking environmental inputs to genomic stability.

Authors:  Bérénice A Benayoun; Elizabeth A Pollina; Anne Brunet
Journal:  Nat Rev Mol Cell Biol       Date:  2015-09-16       Impact factor: 94.444

Review 2.  Chromatin regulation at the frontier of synthetic biology.

Authors:  Albert J Keung; J Keith Joung; Ahmad S Khalil; James J Collins
Journal:  Nat Rev Genet       Date:  2015-02-10       Impact factor: 53.242

Review 3.  RNA-mediated regulation of heterochromatin.

Authors:  Whitney L Johnson; Aaron F Straight
Journal:  Curr Opin Cell Biol       Date:  2017-06-11       Impact factor: 8.382

4.  MOLECULAR BIOLOGY. A unifying model of epigenetic regulation.

Authors:  Albert J Keung; Ahmad S Khalil
Journal:  Science       Date:  2016-02-12       Impact factor: 47.728

Review 5.  Transgenerational inheritance of metabolic disease.

Authors:  Rachel Stegemann; David A Buchner
Journal:  Semin Cell Dev Biol       Date:  2015-04-29       Impact factor: 7.727

6.  Epigenetics: Histones pass the message on.

Authors:  Bryony Jones
Journal:  Nat Rev Genet       Date:  2014-12-09       Impact factor: 53.242

7.  DNA methylation secures CD4(+) and CD8(+) T cell lineage borders.

Authors:  Yongqiang Feng; Alexander Y Rudensky
Journal:  Nat Immunol       Date:  2015-07       Impact factor: 25.606

8.  H3K14 ubiquitylation promotes H3K9 methylation for heterochromatin assembly.

Authors:  Eriko Oya; Reiko Nakagawa; Yuriko Yoshimura; Mayo Tanaka; Gohei Nishibuchi; Shinichi Machida; Atsuko Shirai; Karl Ekwall; Hitoshi Kurumizaka; Hideaki Tagami; Jun-Ichi Nakayama
Journal:  EMBO Rep       Date:  2019-08-29       Impact factor: 8.807

Review 9.  Epigenetic plasticity and the hallmarks of cancer.

Authors:  William A Flavahan; Elizabeth Gaskell; Bradley E Bernstein
Journal:  Science       Date:  2017-07-21       Impact factor: 47.728

Review 10.  Epigenetic inheritance of acquired traits through sperm RNAs and sperm RNA modifications.

Authors:  Qi Chen; Wei Yan; Enkui Duan
Journal:  Nat Rev Genet       Date:  2016-10-03       Impact factor: 53.242

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