Literature DB >> 25825729

Four hundred million years of silica biomineralization in land plants.

Elizabeth Trembath-Reichert1, Jonathan Paul Wilson2, Shawn E McGlynn3, Woodward W Fischer4.   

Abstract

Biomineralization plays a fundamental role in the global silicon cycle. Grasses are known to mobilize significant quantities of Si in the form of silica biominerals and dominate the terrestrial realm today, but they have relatively recent origins and only rose to taxonomic and ecological prominence within the Cenozoic Era. This raises questions regarding when and how the biological silica cycle evolved. To address these questions, we examined silica abundances of extant members of early-diverging land plant clades, which show that silica biomineralization is widespread across terrestrial plant linages. Particularly high silica abundances are observed in lycophytes and early-diverging ferns. However, silica biomineralization is rare within later-evolving gymnosperms, implying a complex evolutionary history within the seed plants. Electron microscopy and X-ray spectroscopy show that the most common silica-mineralized tissues include the vascular system, epidermal cells, and stomata, which is consistent with the hypothesis that biomineralization in plants is frequently coupled to transpiration. Furthermore, sequence, phylogenetic, and structural analysis of nodulin 26-like intrinsic proteins from diverse plant genomes points to a plastic and ancient capacity for silica accumulation within terrestrial plants. The integration of these two comparative biology approaches demonstrates that silica biomineralization has been an important process for land plants over the course of their >400 My evolutionary history.

Entities:  

Keywords:  aquaporin; fern; lycophyte; phytolith; silicon

Mesh:

Substances:

Year:  2015        PMID: 25825729      PMCID: PMC4418875          DOI: 10.1073/pnas.1500289112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  42 in total

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Authors:  Michael W Frohlich; Mark W Chase
Journal:  Nature       Date:  2007-12-20       Impact factor: 49.962

2.  Characterization of substrate specificity of a rice silicon transporter, Lsi1.

Authors:  Namiki Mitani; Naoki Yamaji; Jian Feng Ma
Journal:  Pflugers Arch       Date:  2008-01-23       Impact factor: 3.657

Review 3.  Diversity and evolution of membrane intrinsic proteins.

Authors:  Federico Abascal; Iker Irisarri; Rafael Zardoya
Journal:  Biochim Biophys Acta       Date:  2013-12-16

4.  Phylogenetic relationships among seed plants: Persistent questions and the limits of molecular data.

Authors:  Sarah Mathews
Journal:  Am J Bot       Date:  2008-12-24       Impact factor: 3.844

5.  Decoupled taxonomic radiation and ecological expansion of open-habitat grasses in the Cenozoic of North America.

Authors:  Caroline A E Strömberg
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-11       Impact factor: 11.205

6.  Phylogenetic variation in the silicon composition of plants.

Authors:  M J Hodson; P J White; A Mead; M R Broadley
Journal:  Ann Bot       Date:  2005-09-21       Impact factor: 4.357

7.  Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

Authors:  Andrew M Waterhouse; James B Procter; David M A Martin; Michèle Clamp; Geoffrey J Barton
Journal:  Bioinformatics       Date:  2009-01-16       Impact factor: 6.937

8.  Transporters of arsenite in rice and their role in arsenic accumulation in rice grain.

Authors:  Jian Feng Ma; Naoki Yamaji; Namiki Mitani; Xiao-Yan Xu; Yu-Hong Su; Steve P McGrath; Fang-Jie Zhao
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-14       Impact factor: 11.205

9.  The terrestrial silica pump.

Authors:  Joanna C Carey; Robinson W Fulweiler
Journal:  PLoS One       Date:  2012-12-31       Impact factor: 3.240

10.  LOMETS: a local meta-threading-server for protein structure prediction.

Authors:  Sitao Wu; Yang Zhang
Journal:  Nucleic Acids Res       Date:  2007-05-03       Impact factor: 16.971

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  23 in total

Review 1.  Forbidden phenotypes and the limits of evolution.

Authors:  Geerat J Vermeij
Journal:  Interface Focus       Date:  2015-12-06       Impact factor: 3.906

2.  Formation of silica aggregates in sorghum root endodermis is predetermined by cell wall architecture and development.

Authors:  Milan Soukup; Michal Martinka; Dragana Bosnic; Mária Caplovicová; Rivka Elbaum; Alexander Lux
Journal:  Ann Bot       Date:  2017-11-10       Impact factor: 4.357

Review 3.  Origins and Evolution of Stomatal Development.

Authors:  Caspar C C Chater; Robert S Caine; Andrew J Fleming; Julie E Gray
Journal:  Plant Physiol       Date:  2017-03-29       Impact factor: 8.340

4.  Effects of water availability and UV radiation on silicon accumulation in the C4 crop proso millet.

Authors:  Mateja Grašič; Urša Malovrh; Aleksandra Golob; Katarina Vogel-Mikuš; Alenka Gaberščik
Journal:  Photochem Photobiol Sci       Date:  2019-02-13       Impact factor: 3.982

5.  Isolation and functional characterization of CsLsi2, a cucumber silicon efflux transporter gene.

Authors:  Hao Sun; Yaoke Duan; Xiaocui Qi; Liyang Zhang; Heqiang Huo; Haijun Gong
Journal:  Ann Bot       Date:  2018-09-24       Impact factor: 4.357

6.  Mineral Deposits in Ficus Leaves: Morphologies and Locations in Relation to Function.

Authors:  Maria Pierantoni; Ron Tenne; Batel Rephael; Vlad Brumfeld; Adam van Casteren; Kornelius Kupczik; Dan Oron; Lia Addadi; Steve Weiner
Journal:  Plant Physiol       Date:  2017-12-14       Impact factor: 8.340

7.  Direct evidence of the molecular basis for biological silicon transport.

Authors:  Michael J Knight; Laura Senior; Bethany Nancolas; Sarah Ratcliffe; Paul Curnow
Journal:  Nat Commun       Date:  2016-06-16       Impact factor: 14.919

8.  The Evolution of Silicon Transport in Eukaryotes.

Authors:  Alan O Marron; Sarah Ratcliffe; Glen L Wheeler; Raymond E Goldstein; Nicole King; Fabrice Not; Colomban de Vargas; Daniel J Richter
Journal:  Mol Biol Evol       Date:  2016-10-11       Impact factor: 16.240

9.  Dynamic responses to silicon in Thalasiossira pseudonana - Identification, characterisation and classification of signature genes and their corresponding protein motifs.

Authors:  Tore Brembu; Matilde Skogen Chauton; Per Winge; Atle M Bones; Olav Vadstein
Journal:  Sci Rep       Date:  2017-07-07       Impact factor: 4.379

Review 10.  Silicon and the Plant Extracellular Matrix.

Authors:  Gea Guerriero; Jean-Francois Hausman; Sylvain Legay
Journal:  Front Plant Sci       Date:  2016-04-12       Impact factor: 5.753

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