| Literature DB >> 25824568 |
Venkata R Krishnamurthy1, Mohammed Y R Sardar1, Yu Ying2, Xuezheng Song2, Carolyn Haller1, Erbin Dai1, Xiaocong Wang3, Donny Hanjaya-Putra1, Lijun Sun4, Vasilios Morikis5, Scott I Simon5, Robert J Woods6, Richard D Cummings2, Elliot L Chaikof1.
Abstract
Blockade of P-selectin (P-sel)/PSGL-1 interactions holds significant potential for treatment of disorders of innate immunity, thrombosis and cancer. Current inhibitors remain limited due to low binding affinity or by the recognized disadvantages inherent to chronic administration of antibody therapeutics. Here we report an efficient approach for generating glycosulfopeptide mimics of N-terminal PSGL-1 through development of a stereoselective route for multi-gram scale synthesis of the C2 O-glycan building block and replacement of hydrolytically labile tyrosine sulfates with isosteric sulfonate analogues. Library screening afforded a compound of exceptional stability, GSnP-6, that binds to human P-sel with nanomolar affinity (Kd~22 nM). Molecular dynamics simulation defines the origin of this affinity in terms of a number of critical structural contributions. GSnP-6 potently blocks P-sel/PSGL-1 interactions in vitro and in vivo and represents a promising candidate for the treatment of diseases driven by acute and chronic inflammation.Entities:
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Year: 2015 PMID: 25824568 PMCID: PMC4423566 DOI: 10.1038/ncomms7387
Source DB: PubMed Journal: Nat Commun ISSN: 2041-1723 Impact factor: 14.919
Per-residue MM/GBSA interaction energies[a] for interactions of P-selectin with residues in PSGL-1 and GSnP-6
| PSGL-1 | GSnP-6 | PSGL-1 | GSnP-6 | ||
|---|---|---|---|---|---|
| Y/YC 605[ | −1.4 ± 0.6 | −1.3 ± 0.6 | Neu5Ac | −2.7 ± 0.8 | −2.6 ± 0.8 |
| Y/YC 607[ | −5.5 ± 0.7 | −6.0 ± 0.6 | Core-2 Gal | −4.2 ± 0.7 | −4.2 ± 0.7 |
| Y/YC 610[ | −0.8 ± 0.4 | −0.6 ± 0.3 | GlcNAc | −3.3 ± 0.6 | −3.2 ± 0.5 |
| SO3– 605[ | −1.9 ± 0.8 | −2.3 ± 0.9 | Fuc | −4.8 ± 1.3 | −4.7 ± 1.3 |
| SO3– 607[ | −2.9 ± 0.9 | −3.5 ± 0.8 | GalNAc | −0.6 ± 0.3 | −0.4 ± 0.2 |
| SO3– 610[ | −0.8 ± 0.6 | −0.8 ± 0.4 | Gal | 0.1 ± 0.1 | 0.1 ± 0.1 |
| Subtotal | −13.3 ± 1.7 | −14.1 ± 1.5 | Subtotal | −15.5 ± 1.8 | −15.0 ± 1.8 |
| Amino Acids | |||||
| K603[ | N/A | 1.3 ± 0.1 | L613 | −4.1 ± 1.1 | −3.4 ± 1.2 |
| E604 | 0.1 ± 0.2 | −0.6 ± 0.1 | P614 | −1.9 ± 1.2 | −1.3 ± 1.0 |
| E606 | −1.2 ± 0.4 | −1.2 ± 0.3 | E615 | −0.9 ± 0.2 | −0.9 ± 0.2 |
| L608 | −2.2 ± 1.2 | −3.3 ± 0.8 | T616[ | −1.4 ± 0.3 | −1.3 ± 0.4 |
| D609 | −1.8 ± 0.7 | −1.9 ± 0.7 | E617 | −0.6 ± 0.3 | −0.5 ± 0.3 |
| D611 | −0.7 ± 0.1 | −0.7 ± 0.1 | P618 | −0.4 ± 0.1 | −0.4 ± 0.2 |
| F612 | −1.2 ± 0.6 | −0.9 ± 0.5 | |||
| Subtotal | −16.3 ± 2.3 | −15.1 ± 2.1 | |||
| Total Interaction Energy | −45.1 ± 3.4 | −44.6 ± 3.1 | |||
All results are in kcal/mol. The entropy contributions are not included in these results.
Contribution from tyrosine sulfate or tyrosine sulfonate not including the SO3– group.
SO3– is counted as a residue in the energy decomposition, instead of –O-SO3– or –CH2–SO3–.
Glycosylation site.
Numbering based on the crystal structure.