Literature DB >> 2582357

Characterization of cloned human alphoid satellite with an unusual monomeric construction: evidence for enrichment in HeLa small polydisperse circular DNA.

R S Jones, S S Potter.   

Abstract

A recombinant DNA plasmid library was constructed from HeLa cell extrachromosomal circular DNA and the sequence organization of one family of clones, which contain sequences enriched in HeLa small polydisperse circular (spc) DNA, was studied by restriction mapping and base sequence analysis. Restriction mapping revealed each clone to be composed solely of imperfect tandem repeats of ca. 170 bp. The entire DNA sequence of one clone was determined and found to be alphoid satellite with a variant monomeric construction.

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Year:  1985        PMID： 2582357      PMCID： PMC341050          DOI： 10.1093/nar/13.3.1027

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  51 in total

1.  Highly repeated DNA of the baboon: organization of sequences homologous to highly repeated DNA of the African green monkey.

Authors:  D Singer; L Donehower
Journal:  J Mol Biol       Date:  1979-11-15       Impact factor: 5.469

2.  Loss of reiterated DNA sequences during serial passage of human diploid fibroblasts.

Authors:  R J Shmookler Reis; S Goldstein
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

3.  Sequence definition and organization of a human repeated DNA.

Authors:  J C Wu; L Manuelidis
Journal:  J Mol Biol       Date:  1980-09-25       Impact factor: 5.469

Review 4.  Replication of eukaryotic chromosomes: a close-up of the replication fork.

Authors:  M L DePamphilis; P M Wassarman
Journal:  Annu Rev Biochem       Date:  1980       Impact factor: 23.643

5.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

6.  Sequence relationships between single repeat units of highly reiterated African Green monkey DNA.

Authors:  R E Thayer; M F Singer; T F McCutchan
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

7.  Unequal crossing over in the ribosomal DNA of Saccharomyces cerevisiae.

Authors:  J W Szostak; R Wu
Journal:  Nature       Date:  1980-04-03       Impact factor: 49.962

8.  Unequal meiotic recombination within tandem arrays of yeast ribosomal DNA genes.

Authors:  T D Petes
Journal:  Cell       Date:  1980-03       Impact factor: 41.582

9.  Highly repetitive component alpha and related alphoid DNAs in man and monkeys.

Authors:  P R Musich; F L Brown; J J Maio
Journal:  Chromosoma       Date:  1980       Impact factor: 4.316

10.  DNA strand reassociation and polyribonucleotide binding in the African green monkey, Cercopithecus aethiops.

Authors:  J J Maio
Journal:  J Mol Biol       Date:  1971-03-28       Impact factor: 5.469
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  26 in total

Review 1.  A survey of the genomic distribution of alpha satellite DNA on all the human chromosomes, and derivation of a new consensus sequence.

Authors:  K H Choo; B Vissel; A Nagy; E Earle; P Kalitsis
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

2.  The size of small polydisperse circular DNA (spcDNA) in angiofibroma-derived cell cultures from patients with tuberous sclerosis (TSC) differs from that in fibroblasts.

Authors:  K Motejlek; G Assum; W Krone; A K Kleinschmidt
Journal:  Hum Genet       Date:  1991-05       Impact factor: 4.132

Review 3.  Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved "chromatin folding code".

Authors:  P Vogt
Journal:  Hum Genet       Date:  1990-03       Impact factor: 4.132

4.  Multiple mechanisms generate extrachromosomal circular DNA in Chinese hamster ovary cells.

Authors:  S W Stanfield; D R Helinski
Journal:  Nucleic Acids Res       Date:  1986-04-25       Impact factor: 16.971

5.  A repetitive DNA family (Sau3A family) in human chromosomes: extrachromosomal DNA and DNA polymorphism.

Authors:  R Kiyama; H Matsui; M Oishi
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

6.  Extrachromosomal circular DNAs in Drosophila melanogaster: comparison between embryos and Kc0% cells.

Authors:  F Degroote; G Pont; D Micard; G Picard
Journal:  Chromosoma       Date:  1989-09       Impact factor: 4.316

7.  Structure, organization, and sequence of alpha satellite DNA from human chromosome 17: evidence for evolution by unequal crossing-over and an ancestral pentamer repeat shared with the human X chromosome.

Authors:  J S Waye; H F Willard
Journal:  Mol Cell Biol       Date:  1986-09       Impact factor: 4.272

8.  Nucleotide sequence heterogeneity of alpha satellite repetitive DNA: a survey of alphoid sequences from different human chromosomes.

Authors:  J S Waye; H F Willard
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

9.  Organization and evolution of alpha satellite DNA from human chromosome 11.

Authors:  J S Waye; L A Creeper; H F Willard
Journal:  Chromosoma       Date:  1987       Impact factor: 4.316

10.  Characterization of repetitive sequence families in mouse heart small polydisperse circular DNAs: age-related studies.

Authors:  S C Flores; P Sunnerhagen; T K Moore; J W Gaubatz
Journal:  Nucleic Acids Res       Date:  1988-05-11       Impact factor: 16.971
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