Literature DB >> 3014502

A repetitive DNA family (Sau3A family) in human chromosomes: extrachromosomal DNA and DNA polymorphism.

R Kiyama, H Matsui, M Oishi.   

Abstract

In this paper, we report a tandemly repeated DNA sequence found in human chromosomes. The DNA sequence, which is present at approximately 1000 copies per haploid genome, consists of a basic unit 849 base pairs (bp) long with a single specific restriction enzyme (Sau3AI) cutting site. The unit is further composed of five subunits, each approximately 170 bp long. When DNAs from various sources were examined by Southern hybridization using the repetitive DNA as a probe, a considerable degree of restriction fragment length polymorphism was observed. Furthermore, a substantial percentage (approximately 1.0%) of the same DNA sequence was also found extrachromosomally in the cultured human (HeLa) cells as monomers and oligomers of the basic unit in the form of covalently closed circular DNA. These results suggest that the repetitive DNA is unstable and prone to be excised from the chromosomes through homologous recombination.

Entities:  

Mesh:

Substances:

Year:  1986        PMID: 3014502      PMCID: PMC323802          DOI: 10.1073/pnas.83.13.4665

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Rec-mediated recombinational hot spot activity in bacteriophage lambda. III. Chi mutations are site-mutations stimulating rec-mediated recombination.

Authors:  F W Stahl; J M Crasemann; M M Stahl
Journal:  J Mol Biol       Date:  1975-05-15       Impact factor: 5.469

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Highly reiterated sequences of SIMIANSIMIANSIMIANSIMIANSIMIAN.

Authors:  H Rosenberg; M Singer; M Rosenberg
Journal:  Science       Date:  1978-04-28       Impact factor: 47.728

4.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

5.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
Journal:  Nucleic Acids Res       Date:  1979-11-24       Impact factor: 16.971

6.  Rec-mediated recombinational hot spot activity in bacteriophage lambda. I. Hot spot activity associated with spi-deletions and bio substitutions.

Authors:  K D McMilin; M M Stahl; F W Stahl
Journal:  Genetics       Date:  1974-07       Impact factor: 4.562

7.  Selective extraction of polyoma DNA from infected mouse cell cultures.

Authors:  B Hirt
Journal:  J Mol Biol       Date:  1967-06-14       Impact factor: 5.469

8.  A ubiquitous family of repeated DNA sequences in the human genome.

Authors:  C M Houck; F P Rinehart; C W Schmid
Journal:  J Mol Biol       Date:  1979-08-15       Impact factor: 5.469

9.  Variable satellite DNA's in the African green monkey Cercopithecus aethiops.

Authors:  D M Kurnit; J J Maio
Journal:  Chromosoma       Date:  1974-05-10       Impact factor: 4.316

10.  A set of synthetic oligodeoxyribonucleotide primers for DNA sequencing in the plasmid vector pBR322.

Authors:  R B Wallace; M J Johnson; S V Suggs; K Miyoshi; R Bhatt; K Itakura
Journal:  Gene       Date:  1981-12       Impact factor: 3.688

View more
  23 in total

1.  A new type of insertion mutation in monkey cells: insertion accompanied by long target site duplication.

Authors:  M Ohira; Y S Bae; H Ikeda
Journal:  Mol Gen Genet       Date:  1991-10

Review 2.  Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved "chromatin folding code".

Authors:  P Vogt
Journal:  Hum Genet       Date:  1990-03       Impact factor: 4.132

3.  Breakpoints in alpha, beta, and satellite III DNA sequences of chromosome 9 result in a variety of pericentric inversions.

Authors:  K H Ramesh; R S Verma
Journal:  J Med Genet       Date:  1996-05       Impact factor: 6.318

4.  Molecular characterization of a mouse genomic element mobilized by advanced glycation endproduct modified-DNA (AGE-DNA).

Authors:  T Pushkarsky; L Rourke; L A Spiegel; M F Seldin; R Bucala
Journal:  Mol Med       Date:  1997-11       Impact factor: 6.354

5.  A novel cell-free system reveals a mechanism of circular DNA formation from tandem repeats.

Authors:  S Cohen; M Mechali
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

6.  Nucleotide sequence heterogeneity of alpha satellite repetitive DNA: a survey of alphoid sequences from different human chromosomes.

Authors:  J S Waye; H F Willard
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

7.  Organization and evolution of alpha satellite DNA from human chromosome 11.

Authors:  J S Waye; L A Creeper; H F Willard
Journal:  Chromosoma       Date:  1987       Impact factor: 4.316

8.  Chromosomal localization of Sau3A repetitive DNA revealed by in situ hybridization.

Authors:  R Kiyama; M Oishi; N Kanda
Journal:  Chromosoma       Date:  1988       Impact factor: 4.316

9.  The phylogeny of human chromosome specific alpha satellites.

Authors:  I A Alexandrov; S P Mitkevich; Y B Yurov
Journal:  Chromosoma       Date:  1988       Impact factor: 4.316

10.  Genomic organization of alpha satellite DNA on human chromosome 7: evidence for two distinct alphoid domains on a single chromosome.

Authors:  J S Waye; S B England; H F Willard
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.