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Literature DB >> 2582351

Common structural features of the genes for two stable RNAs from Halobacterium halobium.

A Moritz, B Lankat-Buttgereit, H J Gross, W Goebel.

Abstract

The genes coding for the 5S rRNA and another stable RNA, termed 7S RNA, in Halobacterium halobium were isolated from a genomic library of this archaebacterium and their nucleotide sequences determined. Both genes are colinear with their transcripts (5S rRNA and 7S RNA), but 5S rRNA and possibly also 7S RNA isolated from other halobacteria carry additional nucleotides within the RNA transcript. Both genes are located in the G + C rich chromosomal fraction I of H. halobium. Comparison of the 3' non-coding regions of both genes shows a 20 bp sequence of high homology immediately at the 3' ends which is almost symmetrically flanked by two stem-loop structures, one being situated close to the 3' end but within the coding region and the other downstream of the common 20 bp sequence.

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Year: 1985 PMID： 2582351 PMCID： PMC340972 DOI： 10.1093/nar/13.1.31

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

29 in total

1. An improved method for detecting foreign DNA in plasmids of Escherichia coli.

Authors: R E Thayer
Journal: Anal Biochem Date: 1979-09-15 Impact factor: 3.365

2. Sequence analysis of 5'[32P] labeled mRNA and tRNA using polyacrylamide gel electrophoresis.

Authors: R E Lockard; B Alzner-Deweerd; J E Heckman; J MacGee; M W Tabor; U L RajBhandary
Journal: Nucleic Acids Res Date: 1978-01 Impact factor: 16.971

Review 3. Regulatory sequences involved in the promotion and termination of RNA transcription.

Authors: M Rosenberg; D Court
Journal: Annu Rev Genet Date: 1979 Impact factor: 16.830

4. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors: P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal: J Mol Biol Date: 1977-06-15 Impact factor: 5.469

5. Studies on extrachromosomal DNA elements. Replication of the colicinogenic factor Col E1 in two temperature sensitive mutants of Escherichia coli defective in DNA replication.

Authors: W Goebel
Journal: Eur J Biochem Date: 1970-08

6. Fractionation of low molecular weight DNA or RNA in polyacrylamide gels containing 98% formamide or 7 M urea.

Authors: T Maniatis; A Efstratiadis
Journal: Methods Enzymol Date: 1980 Impact factor: 1.600

7. A small cosmid for efficient cloning of large DNA fragments.

Authors: B Hohn; J Collins
Journal: Gene Date: 1980-11 Impact factor: 3.688

8. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.

Authors: J Messing; J Vieira
Journal: Gene Date: 1982-10 Impact factor: 3.688

9. Mapping adenines, guanines, and pyrimidines in RNA.

Authors: H Donis-Keller; A M Maxam; W Gilbert
Journal: Nucleic Acids Res Date: 1977-08 Impact factor: 16.971

10. Archaebacteria and eukaryotes possess DNA-dependent RNA polymerases of a common type.

Authors: J Huet; R Schnabel; A Sentenac; W Zillig
Journal: EMBO J Date: 1983 Impact factor: 11.598

19 in total

1. Association of the halobacterial 7S RNA to the polysome correlates with expression of the membrane protein bacterioopsin.

Authors: R Gropp; F Gropp; M C Betlach
Journal: Proc Natl Acad Sci U S A Date: 1992-02-15 Impact factor: 11.205

Review 5. Molecular biology of archaebacteria.

Authors: P P Dennis
Journal: J Bacteriol Date: 1986-11 Impact factor: 3.490

Common structural features of the genes for two stable RNAs from Halobacterium halobium.

1. An improved method for detecting foreign DNA in plasmids of Escherichia coli.

2. Sequence analysis of 5'[32P] labeled mRNA and tRNA using polyacrylamide gel electrophoresis.

Review 3. Regulatory sequences involved in the promotion and termination of RNA transcription.

4. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

5. Studies on extrachromosomal DNA elements. Replication of the colicinogenic factor Col E1 in two temperature sensitive mutants of Escherichia coli defective in DNA replication.

6. Fractionation of low molecular weight DNA or RNA in polyacrylamide gels containing 98% formamide or 7 M urea.

7. A small cosmid for efficient cloning of large DNA fragments.

8. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.

9. Mapping adenines, guanines, and pyrimidines in RNA.

10. Archaebacteria and eukaryotes possess DNA-dependent RNA polymerases of a common type.

1. Association of the halobacterial 7S RNA to the polysome correlates with expression of the membrane protein bacterioopsin.

2. Structure of the archaebacterial 7S RNA molecule.

3. SRP-RNA sequence alignment and secondary structure.

4. Characterization of the 7S RNA and its gene from halobacteria.

Review 5. Molecular biology of archaebacteria.

Review 6. Nucleolytic processing of ribonucleic acid transcripts in procaryotes.

7. Compilation of small RNA sequences.

Review 8. Methanogens and the diversity of archaebacteria.

9. Polyadenylated RNA isolated from the archaebacterium Halobacterium halobium.

10. The bat gene of Halobacterium halobium encodes a trans-acting oxygen inducibility factor.