Literature DB >> 25822060

A conceptual model of morphogenesis and regeneration.

A Tosenberger1, N Bessonov, M Levin, N Reinberg, V Volpert, N Morozova.   

Abstract

This paper is devoted to computer modelling of the development and regeneration of multicellular biological structures. Some species (e.g. planaria and salamanders) are able to regenerate parts of their body after amputation damage, but the global rules governing cooperative cell behaviour during morphogenesis are not known. Here, we consider a simplified model organism, which consists of tissues formed around special cells that can be interpreted as stem cells. We assume that stem cells communicate with each other by a set of signals, and that the values of these signals depend on the distance between cells. Thus the signal distribution characterizes location of stem cells. If the signal distribution is changed, then the difference between the initial and the current signal distribution affects the behaviour of stem cells-e.g. as a result of an amputation of a part of tissue the signal distribution changes which stimulates stem cells to migrate to new locations, appropriate for regeneration of the proper pattern. Moreover, as stem cells divide and form tissues around them, they control the form and the size of regenerating tissues. This two-level organization of the model organism, with global regulation of stem cells and local regulation of tissues, allows its reproducible development and regeneration.

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Year:  2015        PMID: 25822060      PMCID: PMC4868547          DOI: 10.1007/s10441-015-9249-9

Source DB:  PubMed          Journal:  Acta Biotheor        ISSN: 0001-5342            Impact factor:   1.774


  23 in total

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Authors:  Michael Levin
Journal:  Regen Med       Date:  2011-11       Impact factor: 3.806

2.  The measurement of intercellular adhesion.

Authors:  S A Roth; J A Weston
Journal:  Proc Natl Acad Sci U S A       Date:  1967-09       Impact factor: 11.205

Review 3.  A linear-encoding model explains the variability of the target morphology in regeneration.

Authors:  Daniel Lobo; Mauricio Solano; George A Bubenik; Michael Levin
Journal:  J R Soc Interface       Date:  2014-01-08       Impact factor: 4.118

4.  Trapped fingers and amputated finger tips in children.

Authors:  C M Illingworth
Journal:  J Pediatr Surg       Date:  1974-12       Impact factor: 2.545

Review 5.  The Spemann-Mangold organizer: the control of fate specification and morphogenetic rearrangements during gastrulation in Xenopus.

Authors:  T Bouwmeester
Journal:  Int J Dev Biol       Date:  2001       Impact factor: 2.203

Review 6.  Morphogenetic fields in embryogenesis, regeneration, and cancer: non-local control of complex patterning.

Authors:  Michael Levin
Journal:  Biosystems       Date:  2012-04-20       Impact factor: 1.973

7.  Cells keep a memory of their tissue origin during axolotl limb regeneration.

Authors:  Martin Kragl; Dunja Knapp; Eugen Nacu; Shahryar Khattak; Malcolm Maden; Hans Henning Epperlein; Elly M Tanaka
Journal:  Nature       Date:  2009-07-02       Impact factor: 49.962

Review 8.  Liver regeneration.

Authors:  Shennen A Mao; Jaime M Glorioso; Scott L Nyberg
Journal:  Transl Res       Date:  2014-01-16       Impact factor: 7.012

9.  On a model of pattern regeneration based on cell memory.

Authors:  Nikolai Bessonov; Michael Levin; Nadya Morozova; Natalia Reinberg; Alen Tosenberger; Vitaly Volpert
Journal:  PLoS One       Date:  2015-02-19       Impact factor: 3.240

10.  Q&A: what is regeneration, and why look to planarians for answers?

Authors:  Alejandro Sánchez Alvarado
Journal:  BMC Biol       Date:  2012-11-08       Impact factor: 7.431

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  8 in total

Review 1.  Planarian regeneration as a model of anatomical homeostasis: Recent progress in biophysical and computational approaches.

Authors:  Michael Levin; Alexis M Pietak; Johanna Bischof
Journal:  Semin Cell Dev Biol       Date:  2018-05-01       Impact factor: 7.727

Review 2.  Nature's Electric Potential: A Systematic Review of the Role of Bioelectricity in Wound Healing and Regenerative Processes in Animals, Humans, and Plants.

Authors:  Sheena E B Tyler
Journal:  Front Physiol       Date:  2017-09-04       Impact factor: 4.566

3.  Long-Term, Stochastic Editing of Regenerative Anatomy via Targeting Endogenous Bioelectric Gradients.

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Journal:  Biophys J       Date:  2017-05-23       Impact factor: 4.033

4.  A multiscale model of early cell lineage specification including cell division.

Authors:  Alen Tosenberger; Didier Gonze; Sylvain Bessonnard; Michel Cohen-Tannoudji; Claire Chazaud; Geneviève Dupont
Journal:  NPJ Syst Biol Appl       Date:  2017-06-09

5.  Physiological controls of large-scale patterning in planarian regeneration: a molecular and computational perspective on growth and form.

Authors:  Fallon Durant; Daniel Lobo; Jennifer Hammelman; Michael Levin
Journal:  Regeneration (Oxf)       Date:  2016-04-28

Review 6.  Target morphology and cell memory: a model of regenerative pattern formation.

Authors:  Nikolai Bessonov; Michael Levin; Nadya Morozova; Natalia Reinberg; Alen Tosenberger; Vitaly Volpert
Journal:  Neural Regen Res       Date:  2015-12       Impact factor: 5.135

7.  Gap Junctional Blockade Stochastically Induces Different Species-Specific Head Anatomies in Genetically Wild-Type Girardia dorotocephala Flatworms.

Authors:  Maya Emmons-Bell; Fallon Durant; Jennifer Hammelman; Nicholas Bessonov; Vitaly Volpert; Junji Morokuma; Kaylinnette Pinet; Dany S Adams; Alexis Pietak; Daniel Lobo; Michael Levin
Journal:  Int J Mol Sci       Date:  2015-11-24       Impact factor: 5.923

8.  Minimal Developmental Computation: A Causal Network Approach to Understand Morphogenetic Pattern Formation.

Authors:  Santosh Manicka; Michael Levin
Journal:  Entropy (Basel)       Date:  2022-01-10       Impact factor: 2.524

  8 in total

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