Literature DB >> 25819973

Vernalophrys algivore gen. nov., sp. nov. (Rhizaria: Cercozoa: Vampyrellida), a New Algal Predator Isolated from Outdoor Mass Culture of Scenedesmus dimorphus.

Yingchun Gong1, David J Patterson2, Yunguang Li3, Zixuan Hu4, Milton Sommerfeld5, Yongsheng Chen4, Qiang Hu1.   

Abstract

Microbial contamination is the main cause of loss of biomass yield in microalgal cultures, especially under outdoor environmental conditions. Little is known about the identities of microbial contaminants in outdoor mass algal cultures. In this study, a new genus and species of vampyrellid amoeba, Vernalophrys algivore, is described from cultures of Scenedesmus dimorphus in open raceway ponds and outdoor flat-panel photobioreactors. This vampyrellid amoeba was a significant grazer of Scenedesmus and was frequently associated with a very rapid decline in algal numbers. We report on the morphology, subcellular structure, feeding behavior, molecular phylogeny, and life cycle. The new amoeba resembles Leptophrys in the shape of trophozoites and pseudopodia and in the mechanism of feeding (mainly by engulfment). It possesses two distinctive regions in helix E10_1 (nucleotides 117 to 119, CAA) and E23_1 (nucleotides 522 and 523, AG) of the 18S rRNA gene. It did not form a monophyletic group with Leptophrys in molecular phylogenetic trees. We establish a new genus, Vernalophrys, with the type species Vernalophrys algivore. The occurrence, impact of the amoeba on mass culture of S. dimorphus, and means to reduce vampyrellid amoeba contamination in Scenedesmus cultures are addressed. The information obtained from this study will be useful for developing an early warning system and control measures for preventing or treating this contaminant in microalgal mass cultures.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25819973      PMCID: PMC4524137          DOI: 10.1128/AEM.00160-15

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  25 in total

1.  Theratromyxa weberi, An Amoeba Predatory on Plant-Parasitic Nematodes.

Authors:  R M Sayre
Journal:  J Nematol       Date:  1973-10       Impact factor: 1.402

2.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

3.  SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building.

Authors:  Manolo Gouy; Stéphane Guindon; Olivier Gascuel
Journal:  Mol Biol Evol       Date:  2009-10-23       Impact factor: 16.240

4.  Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference.

Authors:  B Rannala; Z Yang
Journal:  J Mol Evol       Date:  1996-09       Impact factor: 2.395

5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  Reevaluation of the phylogenetic relationship between mobilid and sessilid peritrichs (Ciliophora, Oligohymenophorea) based on small subunit rRNA genes sequences.

Authors:  Ying-Chun Gong; Yu-He Yu; Eduardo Villalobo; Fei-Yun Zhu; Wei Miao
Journal:  J Eukaryot Microbiol       Date:  2006 Sep-Oct       Impact factor: 3.346

8.  Genetic diversity and phylogenetic position of the subclass Astomatia (Ciliophora) based on a sampling of six genera from West African oligochaetes (Glossoscolecidae, Megascolecidae), including description of the new genus Paraclausilocola n. gen.

Authors:  Zéphyrin Fokam; Pierre Ngassam; Michaela C Strüder-Kypke; Denis H Lynn
Journal:  Eur J Protistol       Date:  2011-03-12       Impact factor: 3.020

9.  Phylogeny of novel naked Filose and Reticulose Cercozoa: Granofilosea cl. n. and Proteomyxidea revised.

Authors:  David Bass; Ema E-Y Chao; Sergey Nikolaev; Akinori Yabuki; Ken-Ichiro Ishida; Cédric Berney; Ursula Pakzad; Claudia Wylezich; Thomas Cavalier-Smith
Journal:  Protist       Date:  2008-10-26

Review 10.  Morphology, phylogeny, and ecology of the aphelids (Aphelidea, Opisthokonta) and proposal for the new superphylum Opisthosporidia.

Authors:  Sergey A Karpov; Maria A Mamkaeva; Vladimir V Aleoshin; Elena Nassonova; Osu Lilje; Frank H Gleason
Journal:  Front Microbiol       Date:  2014-03-28       Impact factor: 5.640

View more
  3 in total

1.  Multigene phylogeny and cell evolution of chromist infrakingdom Rhizaria: contrasting cell organisation of sister phyla Cercozoa and Retaria.

Authors:  Thomas Cavalier-Smith; Ema E Chao; Rhodri Lewis
Journal:  Protoplasma       Date:  2018-04-17       Impact factor: 3.356

2.  A Novel Treatment Protects Chlorella at Commercial Scale from the Predatory Bacterium Vampirovibrio chlorellavorus.

Authors:  Eneko Ganuza; Charles E Sellers; Braden W Bennett; Eric M Lyons; Laura T Carney
Journal:  Front Microbiol       Date:  2016-06-20       Impact factor: 5.640

3.  Discovery of Bioactive Metabolites in Biofuel Microalgae That Offer Protection against Predatory Bacteria.

Authors:  Christopher E Bagwell; Amanda Abernathy; Remy Barnwell; Charles E Milliken; Peter A Noble; Taraka Dale; Kevin R Beauchesne; Peter D R Moeller
Journal:  Front Microbiol       Date:  2016-04-18       Impact factor: 5.640

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.