Literature DB >> 25801333

Complete genome sequence of the strain Defluviitoga tunisiensis L3, isolated from a thermophilic, production-scale biogas plant.

Irena Maus1, Katharina Gabriela Cibis2, Daniel Wibberg1, Anika Winkler1, Yvonne Stolze1, Helmut König2, Alfred Pühler1, Andreas Schlüter3.   

Abstract

An anaerobic, thermophilic bacterium belonging to the phylum Thermotogae was isolated from a rural, thermophilic biogas plant (54°C) producing methane-rich biogas from maize silage, barley, cattle and pig manure. Here we report the first complete genome sequence of the Defluviitoga tunisiensis strain L3, an isolate from the family Thermotogaceae. The strain L3 encodes several genes predicted to be involved in utilization of a large diversity of complex carbohydrates including cellobiose and xylan for the production of acetate, hydrogen (H2) and carbon dioxide (CO2). The genome sequence of D. tunisiensis L3 provides the basis for biotechnological exploitation of genetic determinants playing an important role in thermophilic fermentation processes utilizing renewable primary products.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Acidogenesis; Biogas production; Carbohydrate utilization; Renewable primary products; Thermotogae

Mesh:

Year:  2015        PMID: 25801333     DOI: 10.1016/j.jbiotec.2015.03.006

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  14 in total

1.  Metagenomics survey unravels diversity of biogas microbiomes with potential to enhance productivity in Kenya.

Authors:  Samuel Mwangangi Muturi; Lucy Wangui Muthui; Paul Mwangi Njogu; Justus Mong'are Onguso; Francis Nyamu Wachira; Stephen Obol Opiyo; Roger Pelle
Journal:  PLoS One       Date:  2021-01-04       Impact factor: 3.240

2.  Complete Draft Genome Sequence of Escherichia coli JF733.

Authors:  Gabriele R M Kleiner; Daniel Wibberg; Anika Winkler; Jörn Kalinowski; John E Wertz; Karl Friehs
Journal:  Genome Announc       Date:  2016-04-21

3.  Complete Genome Sequence of the Novel Cellulolytic, Anaerobic, Thermophilic Bacterium Herbivorax saccincola Type Strain GGR1, Isolated from a Lab Scale Biogas Reactor as Established by Illumina and Nanopore MinION Sequencing.

Authors:  Alexander Pechtl; Christian Rückert; Irena Maus; Daniela E Koeck; Nataliya Trushina; Petra Kornberger; Wolfgang H Schwarz; Andreas Schlüter; Wolfgang Liebl; Vladimir V Zverlov
Journal:  Genome Announc       Date:  2018-02-08

4.  Sugarcane vinasse extreme thermophilic digestion: a glimpse on biogas free management.

Authors:  Mirian Y K Niz; Laura Fuentes; Claudia Etchebehere; Marcelo Zaiat
Journal:  Bioprocess Biosyst Eng       Date:  2021-03-15       Impact factor: 3.210

5.  Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants.

Authors:  Yvonne Stolze; Andreas Bremges; Madis Rumming; Christian Henke; Irena Maus; Alfred Pühler; Alexander Sczyrba; Andreas Schlüter
Journal:  Biotechnol Biofuels       Date:  2016-07-26       Impact factor: 6.040

6.  Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates.

Authors:  Irena Maus; Daniela E Koeck; Katharina G Cibis; Sarah Hahnke; Yong S Kim; Thomas Langer; Jana Kreubel; Marcel Erhard; Andreas Bremges; Sandra Off; Yvonne Stolze; Sebastian Jaenicke; Alexander Goesmann; Alexander Sczyrba; Paul Scherer; Helmut König; Wolfgang H Schwarz; Vladimir V Zverlov; Wolfgang Liebl; Alfred Pühler; Andreas Schlüter; Michael Klocke
Journal:  Biotechnol Biofuels       Date:  2016-08-11       Impact factor: 6.040

7.  Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy.

Authors:  Stefano Campanaro; Laura Treu; Panagiotis G Kougias; Davide De Francisci; Giorgio Valle; Irini Angelidaki
Journal:  Biotechnol Biofuels       Date:  2016-02-02       Impact factor: 6.040

8.  Highly efficient methane generation from untreated microalgae biomass.

Authors:  Viktor Klassen; Olga Blifernez-Klassen; Daniel Wibberg; Anika Winkler; Jörn Kalinowski; Clemens Posten; Olaf Kruse
Journal:  Biotechnol Biofuels       Date:  2017-07-17       Impact factor: 6.040

9.  Hydrogen-Fueled Microbial Pathways in Biogas Upgrading Systems Revealed by Genome-Centric Metagenomics.

Authors:  Laura Treu; Stefano Campanaro; Panagiotis G Kougias; Cristina Sartori; Ilaria Bassani; Irini Angelidaki
Journal:  Front Microbiol       Date:  2018-05-28       Impact factor: 5.640

10.  Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.

Authors:  Irena Maus; Andreas Bremges; Yvonne Stolze; Sarah Hahnke; Katharina G Cibis; Daniela E Koeck; Yong S Kim; Jana Kreubel; Julia Hassa; Daniel Wibberg; Aaron Weimann; Sandra Off; Robbin Stantscheff; Vladimir V Zverlov; Wolfgang H Schwarz; Helmut König; Wolfgang Liebl; Paul Scherer; Alice C McHardy; Alexander Sczyrba; Michael Klocke; Alfred Pühler; Andreas Schlüter
Journal:  Biotechnol Biofuels       Date:  2017-11-13       Impact factor: 6.040

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